Paper · 2021 · Saudi Journal of Biological Sciences

Partial purification and characterization of 2, 4-diacetylphloroglucinol producing Pseudomonas fluorescens VSMKU3054 against bacterial wilt disease of tomato

Perumal Suresh; Govintharaj Varathraju; Vellasamy Shanmugaiah; et al.

10
claims
10
verbatim quotes
28
citations
3
research areas
✓
Open access · cc-by

Abstract

We find out the antimicrobial potential of partially purified 2,4-diacetylphloroglucinol (DAPG) against Ralstonia solanacearum and fungal plant pathogens isolated from tomato rhizobacterium Pseudomonas fluorescens VSMKU3054. The present study is mainly focused on the control of wilt disease of tomato by our isolate VSMKU3054 and DAPG. The cell free culture filtrate of P. fluorescens VSMKU3054 was significantly arrested the growth of R. solanacearum and fungal pathogens such as Rhizoctonia solani, Sclerotium rolfsii, Macrophomina phaseolina and Fusarium oxysporum compared to control. The existence of DAPG from the crude metabolites of P. fluorescens VSMKU3054 was confirmed on TLC with Rf value 0.34, which is coincide with that of authentic phloroglucinol. The partially purified DAPG exhibited much higher activity against R. solanacearum at 30 µg/ml than the fungal plant pathogens compared to control. The antimicrobial partially purified compound was identified as DAPG by UV, FT-IR and GC–MS analysis. The percentage of live cells of R. solanacearum when supplemented with DAPG at 30 µg/ml, significantly controlled the living nature of R. solanacearum up to 68% compared to tetracycline and universal control observed under high content screening analysis. The selected isolate P. fluorescens VSMKU3054 and DAPG significantly controlled wilt disease of tomato up to 59.5% and 42.12% on 3rd and 7th days compared to positive and negative control by detached leaf assay. Further, in silico analysis revealed that high interaction of DAPG encoding protease with lectin which is associated with R. solanacearum. Based on our findings, we confirmed that P. fluorescens VSMKU3054 and DAPG could be used a potential bio inoculants for the management of bacterial wilt disease of tomato.

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Claims 10

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Cell-free culture filtrate of P. fluorescens VSMKU3054 significantly arrested growth of Ralstonia solanacearum compared with control.

Treatment
cell free culture filtrate of P. fluorescens VSMKU3054e0
Interactor
R. solanacearumRalstonia solanacearume0pathogen
Second interactor
P. fluorescens VSMKU3054Pseudomonas fluorescense0biocontrol_agent
Outcome
growthe0
Direction
arrestede0
Comparator
controle0

Not reportedTaxon

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ralstonia solanacearum
Ralstonia solanacearum · InteractorClemson University - USDA Cooperative Extension Slide Series, Bugwood.org · Public domain · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · Second interactorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The cell free culture filtrate of P. fluorescens VSMKU3054 was significantly arrested the growth of R. solanacearum and fungal pathogens such as Rhizoctonia solani, Sclerotium rolfsii, Macrophomina phaseolina and Fusarium oxysporum compared to control”

✓ located verbatim in the source · abstract, characters 337–588 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Cell-free culture filtrate of P. fluorescens VSMKU3054 significantly arrested growth of the fungal pathogens Rhizoctonia solani, Sclerotium rolfsii, Macrophomina phaseolina and Fusarium oxysporum compared with control.

Treatment
cell free culture filtrate of P. fluorescens VSMKU3054e0
Interactor
fungal pathogense0pathogen
Second interactor
P. fluorescens VSMKU3054Pseudomonas fluorescense0biocontrol_agent
Outcome
growthe0
Direction
arrestede0
Qualifier
Rhizoctonia solani, Sclerotium rolfsii, Macrophomina phaseolina and Fusarium oxysporume0
Comparator
controle0

Not reportedTaxon

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pseudomonas fluorescens
Pseudomonas fluorescens · Second interactorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The cell free culture filtrate of P. fluorescens VSMKU3054 was significantly arrested the growth of R. solanacearum and fungal pathogens such as Rhizoctonia solani, Sclerotium rolfsii, Macrophomina phaseolina and Fusarium oxysporum compared to control”

✓ located verbatim in the source · abstract, characters 337–588 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The presence of DAPG in the crude metabolites of P. fluorescens VSMKU3054 was confirmed on TLC with an Rf value of 0.34.

Outcome
existence of DAPGe0
Value
0.34e0

Not reportedTaxonDirection

Verbatim

e0

“The existence of DAPG from the crude metabolites of P. fluorescens VSMKU3054 was confirmed on TLC with Rf value 0.34”

✓ located verbatim in the source · abstract, characters 590–706 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Partially purified DAPG at 30 ug/ml showed much higher activity against R. solanacearum than against the fungal plant pathogens, compared with control.

Treatment
partially purified DAPGe0
Interactor
R. solanacearumRalstonia solanacearume0pathogen
Second interactor
fungal plant pathogense0pathogen
Outcome
activity against R. solanacearume0
Direction
much highere0
Qualifier
at 30 µg/mle0
Comparator
controle0

Not reportedTaxon

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ralstonia solanacearum
Ralstonia solanacearum · InteractorClemson University - USDA Cooperative Extension Slide Series, Bugwood.org · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The partially purified DAPG exhibited much higher activity against R. solanacearum at 30 µg/ml than the fungal plant pathogens compared to control”

✓ located verbatim in the source · abstract, characters 765–911 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The antimicrobial partially purified compound was identified as DAPG by UV, FT-IR and GC-MS analysis.

Outcome
identified as DAPGe0

Not reportedTaxonDirection

Verbatim

e0

“The antimicrobial partially purified compound was identified as DAPG”

✓ located verbatim in the source · abstract, characters 913–981 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

DAPG at 30 ug/ml significantly controlled the living nature of R. solanacearum by up to 68% compared with tetracycline and universal control.

Treatment
DAPG at 30 µg/mle0
Interactor
R. solanacearumRalstonia solanacearume0pathogen
Outcome
living nature of R. solanacearume0
Direction
controllede0
Value
68%e0
Comparator
tetracycline and universal controle0

Not reportedTaxon

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ralstonia solanacearum
Ralstonia solanacearum · InteractorClemson University - USDA Cooperative Extension Slide Series, Bugwood.org · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The percentage of live cells of R. solanacearum when supplemented with DAPG at 30 µg/ml, significantly controlled the living nature of R. solanacearum up to 68% compared to tetracycline and universal control”

✓ located verbatim in the source · abstract, characters 1015–1222 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

The selected isolate P. fluorescens VSMKU3054 significantly controlled wilt disease of tomato by up to 59.5% compared with positive and negative control in a detached leaf assay.

Treatment
The selected isolate P. fluorescens VSMKU3054e0
Interactor
P. fluorescens VSMKU3054Pseudomonas fluorescense0biocontrol_agent
Outcome
wilt diseasee0
Direction
controllede0
Value
59.5%e0
Qualifier
on 3rd and 7th dayse0
Comparator
positive and negative controle0
Setting
detached leaf assaye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The selected isolate P. fluorescens VSMKU3054 and DAPG significantly controlled wilt disease of tomato up to 59.5% and 42.12% on 3rd and 7th days compared to positive and negative control by detached leaf assay”

✓ located verbatim in the source · abstract, characters 1271–1481 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

DAPG significantly controlled wilt disease of tomato by up to 42.12% compared with positive and negative control in a detached leaf assay.

Treatment
DAPGe0
Outcome
wilt diseasee0
Direction
controllede0
Value
42.12%e0
Qualifier
on 3rd and 7th dayse0
Comparator
positive and negative controle0
Setting
detached leaf assaye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The selected isolate P. fluorescens VSMKU3054 and DAPG significantly controlled wilt disease of tomato up to 59.5% and 42.12% on 3rd and 7th days compared to positive and negative control by detached leaf assay”

✓ located verbatim in the source · abstract, characters 1271–1481 · show in text ↑
Associationobservedoriginal resultsimulated

Claim · model-written summary

In silico analysis showed high interaction of the DAPG-encoding protease with a lectin associated with R. solanacearum.

Interactor
R. solanacearumRalstonia solanacearume0pathogen
Gene
lectine0
Outcome
interactione0
Direction
highe0

Not reportedTaxon

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ralstonia solanacearum
Ralstonia solanacearum · InteractorClemson University - USDA Cooperative Extension Slide Series, Bugwood.org · Public domain · Wikimedia Commons ↗

Verbatim

e0

“in silico analysis revealed that high interaction of DAPG encoding protease with lectin which is associated with R. solanacearum”

✓ located verbatim in the source · abstract, characters 1492–1620 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors conclude that P. fluorescens VSMKU3054 and DAPG could be used as potential bio-inoculants for managing bacterial wilt disease of tomato.

Outcome
management of bacterial wilt diseasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“P. fluorescens VSMKU3054 and DAPG could be used a potential bio inoculants for the management of bacterial wilt disease of tomato”

✓ located verbatim in the source · abstract, characters 1663–1792 · show in text ↑

Pseudomonas fluorescens · disease · Solanum lycopersicum (tomato)Positive and negative results

20 papers: 19 positive, 1 negative or no effect

18 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. no effect
  3. positive

16 papers more in this group

See all 20 papers →

Pseudomonas fluorescens · growth · Solanum lycopersicum (tomato)Positive and negative results

36 papers: 34 positive, 2 negative or no effect

33 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. no effect
  3. no effect

32 papers more in this group

See all 36 papers →

Pseudomonas fluorescens · Ralstonia solanacearum · Solanum lycopersicum (tomato)Results agree

9 papers: 9 positive, 0 negative or no effect

8 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

5 papers more in this group

See all 9 papers →

pathogen product · Ralstonia solanacearum · Solanum lycopersicum (tomato)Positive and negative results

8 papers: 7 positive, 1 negative or no effect

6 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

4 papers more in this group

See all 8 papers →

pathogen product · growth · Solanum lycopersicum (tomato)Positive and negative results

25 papers: 21 positive, 4 negative or no effect

20 papers in the same direction as this paper · 4 in the opposite direction

  1. negative
  2. negative
  3. negative

21 papers more in this group

See all 25 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.