Paper · 2016 · Physiologia Plantarum

Three zinc‐finger RNA‐binding proteins in cabbage (Brassica rapa) play diverse roles in seed germination and plant growth under normal and abiotic stress conditions

Ye Rin Park; Min Ji Choi; Su Jung Park; et al.

10
claims
21
verbatim quotes
17
citations
4
research areas
—
Not open access

Abstract

Despite the increasing understanding of the stress-responsive roles of zinc-finger RNA-binding proteins (RZs) in several plant species, such as Arabidopsis thaliana, wheat (Triticum aestivum) and rice (Oryza sativa), the functions of RZs in cabbage (Brassica rapa) have not yet been elucidated. In this study, the functional roles of the three RZ family members present in the cabbage genome, designated as BrRZ1, BrRZ2 and BrRZ3, were investigated in transgenic Arabidopsis under normal and environmental stress conditions. Subcellular localization analysis revealed that all BrRZ proteins were exclusively localized in the nucleus. The expression levels of each BrRZ were markedly increased by cold, drought or salt stress and by abscisic acid (ABA) treatment. Expression of BrRZ3 in Arabidopsis retarded seed germination and stem growth and reduced seed yield of Arabidopsis plants under normal growth conditions. Germination of BrRZ2- or BrRZ3-expressing Arabidopsis seeds was delayed compared with that of wild-type seeds under dehydration or salt stress conditions and cold stress conditions, respectively. Seedling growth of BrRZ3-expressing transgenic Arabidopsis plants was significantly inhibited under salt, dehydration or cold stress conditions. Notably, seedling growth of all three BrRZ-expressing transgenic Arabidopsis plants was inhibited upon ABA treatment. Importantly, all BrRZs possessed RNA chaperone activity. Taken together, these results indicate that the three cabbage BrRZs harboring RNA chaperone activity play diverse roles in seed germination and seedling growth of plants under abiotic stress conditions as well as in the presence of ABA.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

All cabbage BrRZ proteins were exclusively localized in the nucleus.

Gene
BrRZ proteinse2
Outcome
Subcellular localizatione2
Qualifier
exclusively localized in the nucleuse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. capitata
Brassica oleracea var. capitata · TaxonThamizhpparithi Maari · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in cabbage (Brassica rapa) play diverse roles”

✓ located verbatim in the source · title, characters 39–84 · show in text ↑
e2

“Subcellular localization analysis revealed that all BrRZ proteins were exclusively localized in the nucleus”

✓ located verbatim in the source · abstract, characters 525–632 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Expression levels of each cabbage BrRZ were markedly increased by cold, drought or salt stress.

Treatment
cold, drought or salt stresse3
Gene
BrRZe3
Outcome
expression levels of each BrRZe3
Direction
markedly increasede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. capitata
Brassica oleracea var. capitata · TaxonThamizhpparithi Maari · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in cabbage (Brassica rapa) play diverse roles”

✓ located verbatim in the source · title, characters 39–84 · show in text ↑
e3

“The expression levels of each BrRZ were markedly increased by cold, drought or salt stress and by abscisic acid (ABA) treatment”

✓ located verbatim in the source · abstract, characters 634–761 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Expression levels of each cabbage BrRZ were markedly increased by abscisic acid treatment.

Treatment
abscisic acid (ABA) treatmente3
Gene
BrRZe3
Outcome
expression levels of each BrRZe3
Direction
markedly increasede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. capitata
Brassica oleracea var. capitata · TaxonThamizhpparithi Maari · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in cabbage (Brassica rapa) play diverse roles”

✓ located verbatim in the source · title, characters 39–84 · show in text ↑
e3

“The expression levels of each BrRZ were markedly increased by cold, drought or salt stress and by abscisic acid (ABA) treatment”

✓ located verbatim in the source · abstract, characters 634–761 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

BrRZ3 expression in Arabidopsis retarded seed germination and stem growth under normal growth conditions.

Taxon
ArabidopsisArabidopsise4
Treatment
Expression of BrRZ3e4
Gene
BrRZ3e4
Outcome
seed germination and stem growthe4
Direction
retardede4
Qualifier
under normal growth conditionse4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in cabbage (Brassica rapa) play diverse roles”

✓ located verbatim in the source · title, characters 39–84 · show in text ↑
e4

“Expression of BrRZ3 in Arabidopsis retarded seed germination and stem growth and reduced seed yield of Arabidopsis plants under normal growth conditions”

✓ located verbatim in the source · abstract, characters 763–915 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

BrRZ3 expression in Arabidopsis reduced seed yield under normal growth conditions.

Taxon
ArabidopsisArabidopsise4
Treatment
Expression of BrRZ3e4
Gene
BrRZ3e4
Outcome
seed yielde4
Direction
reducede4
Qualifier
under normal growth conditionse4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in cabbage (Brassica rapa) play diverse roles”

✓ located verbatim in the source · title, characters 39–84 · show in text ↑
e4

“Expression of BrRZ3 in Arabidopsis retarded seed germination and stem growth and reduced seed yield of Arabidopsis plants under normal growth conditions”

✓ located verbatim in the source · abstract, characters 763–915 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

BrRZ3-expressing Arabidopsis seedling growth was significantly inhibited under salt, dehydration or cold stress.

Taxon
ArabidopsisArabidopsise5
Treatment
salt, dehydration or cold stress conditionse5
Gene
BrRZ3e5
Outcome
Seedling growthe5
Direction
inhibitede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in cabbage (Brassica rapa) play diverse roles”

✓ located verbatim in the source · title, characters 39–84 · show in text ↑
e5

“Seedling growth of BrRZ3-expressing transgenic Arabidopsis plants was significantly inhibited under salt, dehydration or cold stress conditions”

✓ located verbatim in the source · abstract, characters 1113–1256 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

BrRZ2-expressing Arabidopsis seeds germinated later than wild-type seeds under dehydration or salt stress.

Taxon
ArabidopsisArabidopsise6
Treatment
dehydration or salt stress conditionse6
Gene
BrRZ2e6
Outcome
Germinatione6
Direction
delayede6
Comparator
wild-type seedse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in cabbage (Brassica rapa) play diverse roles”

✓ located verbatim in the source · title, characters 39–84 · show in text ↑
e6

“Germination of BrRZ2- or BrRZ3-expressing Arabidopsis seeds was delayed compared with that of wild-type seeds under dehydration or salt stress conditions”

✓ located verbatim in the source · abstract, characters 917–1070 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

BrRZ3-expressing Arabidopsis seeds germinated later than wild-type seeds under cold stress.

Taxon
ArabidopsisArabidopsise6
Treatment
cold stress conditionse7
Gene
BrRZ3e6
Outcome
Germinatione6
Direction
delayede6
Comparator
wild-type seedse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in cabbage (Brassica rapa) play diverse roles”

✓ located verbatim in the source · title, characters 39–84 · show in text ↑
e6

“Germination of BrRZ2- or BrRZ3-expressing Arabidopsis seeds was delayed compared with that of wild-type seeds under dehydration or salt stress conditions”

✓ located verbatim in the source · abstract, characters 917–1070 · show in text ↑
e7

“and cold stress conditions, respectively”

✓ located verbatim in the source · abstract, characters 1071–1111 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Seedling growth of all three BrRZ-expressing Arabidopsis plants was inhibited by ABA treatment.

Taxon
ArabidopsisArabidopsise1
Treatment
ABA treatmente1
Gene
BrRZe1
Outcome
seedling growthe1
Direction
inhibitede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in cabbage (Brassica rapa) play diverse roles”

✓ located verbatim in the source · title, characters 39–84 · show in text ↑
e1

“seedling growth of all three BrRZ-expressing transgenic Arabidopsis plants was inhibited upon ABA treatment”

✓ located verbatim in the source · abstract, characters 1267–1374 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

All cabbage BrRZ proteins possessed RNA chaperone activity.

Gene
BrRZse1
Outcome
RNA chaperone activitye1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. capitata
Brassica oleracea var. capitata · TaxonThamizhpparithi Maari · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“in cabbage (Brassica rapa) play diverse roles”

✓ located verbatim in the source · title, characters 39–84 · show in text ↑
e1

“all BrRZs possessed RNA chaperone activity”

✓ located verbatim in the source · abstract, characters 1389–1431 · show in text ↑

(+)-abscisic acid · growth · ArabidopsisPositive and negative results

26 papers: 13 positive, 13 negative or no effect

12 papers in the same direction as this paper · 13 in the opposite direction

  1. positive
  2. positive
  3. positive

22 papers more in this group

See all 26 papers →

salinity · growth · ArabidopsisResults differ

25 papers: 3 positive, 22 negative or no effect

21 papers in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. positive
  3. positive

21 papers more in this group

See all 25 papers →

cold · growth · ArabidopsisPositive and negative results

12 papers: 8 positive, 4 negative or no effect

3 papers in the same direction as this paper · 8 in the opposite direction

  1. positive
  2. positive
  3. positive

8 papers more in this group

See all 12 papers →

drought · growth · ArabidopsisPositive and negative results

12 papers: 2 positive, 10 negative or no effect

9 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. positive
  3. negative

8 papers more in this group

See all 12 papers →

transgenic · yield · ArabidopsisPositive and negative results

14 papers: 11 positive, 3 negative or no effect

2 papers in the same direction as this paper · 11 in the opposite direction

  1. positive
  2. positive
  3. positive

10 papers more in this group

See all 14 papers →

transgenic · growth · ArabidopsisPositive and negative results

85 papers: 35 positive, 50 negative or no effect

49 papers in the same direction as this paper · 35 in the opposite direction

  1. positive
  2. positive
  3. positive

81 papers more in this group

See all 85 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.