Paper · 2014 · Journal of Phytopathology

Linking Soil Biotic and Abiotic Factors to Apple Replant Disease: a Greenhouse Approach

Manuela Spath; Heribert Insam; Ursula Peintner; et al.

7
claims
11
verbatim quotes
72
citations
3
research areas
—
Not open access

Abstract

Abstract Apple replant disease (ARD) is a frequently occurring plant disease, which causes retarded growth and mortality of young apple trees in replanted orchards. The aetiology is not well understood, but soil‐borne micro‐organisms are often discussed as primary causal agents of the replant problem. A greenhouse study was conducted in Laimburg, Italy, with orchard soils from the region, with the aim of obtaining information about the influence of soil biotic and abiotic factors on the aetiology of the disease. Apple rootstocks (M9) were planted into soils cultivated with apple trees that were either fumigated with chloropicrin or not fumigated, as well as mixtures of fumigated and non‐fumigated soils. In addition, uncultivated soils (from the inter‐row, from a fallow plot and from a meadow) were taken as controls. Various parameters were measured after 62 days in a controlled pot assay. Soils fumigated with chloropicrin resulted in higher apple shoot growth and lower microbial biomass carbon than non‐fumigated soils. Uncultivated soils had generally the highest microbial biomass carbon and the highest ergosterol contents. No considerable differences between basal respiration, ergosterol content, pH , electrical conductivity, and most nutrient and metal contents were observed between fumigated and non‐fumigated soils. Denaturing gradient gel electrophoresis gels of DNA extracted from the soils revealed differences in the fungal, bacterial and actinobacterial communities of the different soils, indicating significant shifts in microbial community composition after chloropicrin treatment. This study indicates biotic factors in soil to be a causal agent of apple replant disease.

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Claims 7

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Chloropicrin-fumigated soil increased apple shoot growth relative to nonfumigated soil.

Treatment
fumigated with chloropicrine0
Outcome
apple shoot growthe0
Direction
highere0
Comparator
non‐fumigated soilse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Soils fumigated with chloropicrin resulted in higher apple shoot growth and lower microbial biomass carbon than non‐fumigated soils.”

✓ located verbatim in the source · abstract, characters 902–1034 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Chloropicrin-fumigated soil lowered microbial biomass carbon.

Treatment
fumigated with chloropicrine0
Outcome
microbial biomass carbone0
Direction
lowere0
Comparator
non‐fumigated soilse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Soils fumigated with chloropicrin resulted in higher apple shoot growth and lower microbial biomass carbon than non‐fumigated soils.”

✓ located verbatim in the source · abstract, characters 902–1034 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Uncultivated soils generally had the highest microbial biomass carbon.

Outcome
microbial biomass carbone0
Direction
higheste0
Setting
Uncultivated soilse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Uncultivated soils had generally the highest microbial biomass carbon and the highest ergosterol contents.”

✓ located verbatim in the source · abstract, characters 1035–1141 · show in text ↑
t0

“Apple”

✓ located verbatim in the source · title, characters 43–48 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Uncultivated soils generally had the highest ergosterol contents.

Outcome
ergosterol contentse0
Direction
higheste0
Setting
Uncultivated soilse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Uncultivated soils had generally the highest microbial biomass carbon and the highest ergosterol contents.”

✓ located verbatim in the source · abstract, characters 1035–1141 · show in text ↑
t0

“Apple”

✓ located verbatim in the source · title, characters 43–48 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Basal respiration, ergosterol, pH, conductivity, and most nutrients and metals did not differ considerably by fumigation.

Treatment
fumigatede0
Outcome
basal respiration, ergosterol content, pH , electrical conductivity, and most nutrient and metal contentse0
Direction
No considerable differencese0
Comparator
non‐fumigated soilse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“No considerable differences between basal respiration, ergosterol content, pH , electrical conductivity, and most nutrient and metal contents were observed between fumigated and non‐fumigated soils.”

✓ located verbatim in the source · abstract, characters 1142–1340 · show in text ↑
t0

“Apple”

✓ located verbatim in the source · title, characters 43–48 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Chloropicrin shifted fungal, bacterial and actinobacterial soil communities.

Treatment
chloropicrin treatmente0
Outcome
microbial community compositione0
Direction
significant shiftse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“Denaturing gradient gel electrophoresis gels of DNA extracted from the soils revealed differences in the fungal, bacterial and actinobacterial communities of the different soils, indicating significant shifts in microbial community composition after chloropicrin treatment.”

✓ located verbatim in the source · abstract, characters 1341–1614 · show in text ↑
t0

“Apple”

✓ located verbatim in the source · title, characters 43–48 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

The authors infer soil biotic factors cause apple replant disease.

Outcome
apple replant diseasee0
Qualifier
biotic factors in soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

e0

“This study indicates biotic factors in soil to be a causal agent of apple replant disease.”

✓ located verbatim in the source · abstract, characters 1615–1705 · show in text ↑

chloropicrin · growth · Malus domestica (apple)Results agree

5 papers: 5 positive, 0 negative or no effect

4 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

solarization · physiology: respiration · Malus domestica (apple)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

2 in the opposite direction

  1. positive
  2. positive
See all 3 papers →

solarization · growth · Malus domestica (apple)Positive and negative results

16 papers: 14 positive, 2 negative or no effect

13 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

12 papers more in this group

See all 16 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.