Paper · 2008 · Molecular Plant-Microbe Interactions

HRT-Mediated Hypersensitive Response and Resistance to Turnip crinkle virus in Arabidopsis Does Not Require the Function of TIP, the Presumed Guardee Protein

Rae-Dong Jeong; A. C. Chandra-Shekara; Aardra Kachroo; et al.

6
claims
13
verbatim quotes
49
citations
2
research areas
✓
Open access · cc-by-sa

Abstract

The Arabidopsis resistance protein HRT recognizes the Turnip crinkle virus (TCV) coat protein (CP) to induce a hypersensitive response (HR) in the resistant ecotype Di-17. The CP also interacts with a nuclear-targeted NAC family of host transcription factors, designated TIP (TCV-interacting protein). Because binding of CP to TIP prevents nuclear localization of TIP, it has been proposed that TIP serves as a guardee for HRT. Here, we have tested the requirement for TIP in HRT-mediated HR and resistance by analyzing plants carrying knockout mutation in the TIP gene. Our results show that loss of TIP does not alter HR or resistance to TCV. Furthermore, the mutation in TIP neither impaired the salicylic acid-mediated induction of HRT expression nor the enhanced resistance conferred by overexpression of HRT. Strikingly, the mutation in TIP resulted in increased replication of TCV and Cucumber mosaic virus, suggesting that TIP may play a role in basal resistance but is not required for HRT-mediated signaling.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-sa. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

TIP loss did not alter the hypersensitive response to TCV.

Taxon
ArabidopsisArabidopsist0
Treatment
loss of TIPe0
Interactor
TCVe0pathogen
Gene
TIPe0
Outcome
HRe0
Direction
does not altere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“loss of TIP does not alter HR or resistance to TCV”

✓ located verbatim in the source · abstract, characters 593–643 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 79–90 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

TIP loss did not alter resistance to TCV.

Taxon
ArabidopsisArabidopsist0
Treatment
loss of TIPe0
Interactor
TCVe0pathogen
Gene
TIPe0
Outcome
resistance to TCVe0
Direction
does not altere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“loss of TIP does not alter HR or resistance to TCV”

✓ located verbatim in the source · abstract, characters 593–643 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 79–90 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

TIP mutation did not impair salicylic acid mediated HRT expression induction.

Taxon
ArabidopsisArabidopsist0
Treatment
the mutation in TIPe0
Gene
HRTe0
Outcome
salicylic acid-mediated induction of HRT expressione0
Direction
neither impairede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the mutation in TIP neither impaired the salicylic acid-mediated induction of HRT expression nor the enhanced resistance conferred by overexpression of HRT”

✓ located verbatim in the source · abstract, characters 658–813 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 79–90 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

TIP mutation did not impair enhanced resistance conferred by HRT overexpression.

Taxon
ArabidopsisArabidopsist0
Treatment
the mutation in TIPe0
Interactor
TCVe1pathogen
Gene
HRTe0
Outcome
enhanced resistancee0
Direction
neither impairede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the mutation in TIP neither impaired the salicylic acid-mediated induction of HRT expression nor the enhanced resistance conferred by overexpression of HRT”

✓ located verbatim in the source · abstract, characters 658–813 · show in text ↑
t0

“Turnip crinkle virus in Arabidopsis”

✓ located verbatim in the source · title, characters 55–90 · show in text ↑
e1

“loss of TIP does not alter HR or resistance to TCV”

✓ located verbatim in the source · abstract, characters 593–643 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

TIP mutation increased TCV replication.

Taxon
ArabidopsisArabidopsist0
Treatment
the mutation in TIPe0
Interactor
TCVe0pathogen
Gene
TIPe0
Outcome
replication of TCVe0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the mutation in TIP resulted in increased replication of TCV and Cucumber mosaic virus”

✓ located verbatim in the source · abstract, characters 827–913 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 79–90 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

TIP mutation increased Cucumber mosaic virus replication.

Taxon
ArabidopsisArabidopsist0
Treatment
the mutation in TIPe0
Interactor
Cucumber mosaic viruscucumber mosaic cucumoviruse0pathogen
Gene
TIPe0
Outcome
replication of TCV and Cucumber mosaic viruse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
cucumber mosaic cucumovirus
cucumber mosaic cucumovirus · InteractorDieterO · Public domain · Wikimedia Commons ↗

Verbatim

e0

“the mutation in TIP resulted in increased replication of TCV and Cucumber mosaic virus”

✓ located verbatim in the source · abstract, characters 827–913 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 79–90 · show in text ↑

loss of function · cucumber mosaic cucumovirus · ArabidopsisPositive and negative results

3 papers: 1 positive, 2 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
See all 3 papers →

loss of function · organism · ArabidopsisPositive and negative results

8 papers: 1 positive, 7 negative or no effect

6 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
  3. negative

4 papers more in this group

See all 8 papers →

loss of function · molecular: expression · ArabidopsisPositive and negative results

197 papers: 38 positive, 159 negative or no effect

158 papers in the same direction as this paper · 38 in the opposite direction

  1. positive
  2. positive
  3. positive

193 papers more in this group

See all 197 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.