Paper · 2024 · Molecular Horticulture

An ‘activator-repressor’ loop controls the anthocyanin biosynthesis in red-skinned pear

Guangyan Yang; Zhaolong Xue; Kui Lin-Wang; et al.

9
claims
18
verbatim quotes
15
citations
2
research areas
✓
Open access · cc-by

Abstract

The color of red-skinned pear (Pyrus spp.) is primarily attributed to accumulation of anthocyanins, which provide nutritional benefits for human health and are closely associated with the commercial value of fruits. Here, we reported the functional characterization of a R2R3-MYB repressor PyMYB107, which forms an 'activator-repressor' loop to control anthocyanin accumulation in the red-skinned pear. PyMYB107 overexpression inhibited anthocyanin biosynthesis in both pear calli and fruits, while virus-induced gene silencing of PyMYB107 increased anthocyanin accumulation in pear fruits. Furthermore, ectopic expression of PyMYB107 decreased anthocyanin accumulation in tomato, strawberry and tobacco. PyMYB107 can competitively bind to PybHLH3 with PyMYB10/MYB114, thereby suppressing the transcriptional activation of key anthocyanin biosynthesis genes, PyANS and PyUFGT. Site-directed mutagenesis showed that mutations within the R3 domain and EAR motif of PyMYB107 eliminated its repressive activity. Additionally, PyMYB107 exhibited a comparable expression pattern to PyMYB10/MYB114 and was transcriptionally activated by them. Our finding advanced comprehension of the repression mechanism underlying anthocyanin accumulation, providing valuable molecular insights into improving quality of pear fruits.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

PyMYB107 overexpression inhibited anthocyanin biosynthesis in pear calli and fruits.

Organ / stage
calli and fruitse1
Treatment
PyMYB107 overexpressione1
Gene
PyMYB107e1
Outcome
anthocyanin biosynthesise1
Direction
inhibitede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“PyMYB107 overexpression inhibited anthocyanin biosynthesis in both pear calli and fruits”

✓ located verbatim in the source · abstract, characters 403–491 · show in text ↑
t0

“red-skinned pear”

✓ located verbatim in the source · title, characters 71–87 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Virus-induced silencing of PyMYB107 increased anthocyanin accumulation in pear fruits.

Organ / stage
pear fruitse2
Treatment
virus-induced gene silencing of PyMYB107e2
Gene
PyMYB107e2
Outcome
anthocyanin accumulatione2
Direction
increasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“virus-induced gene silencing of PyMYB107 increased anthocyanin accumulation in pear fruits”

✓ located verbatim in the source · abstract, characters 499–589 · show in text ↑
t0

“red-skinned pear”

✓ located verbatim in the source · title, characters 71–87 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Ectopic expression of PyMYB107 decreased anthocyanin accumulation in tomato.

Treatment
ectopic expression of PyMYB107e3
Gene
PyMYB107e3
Outcome
anthocyanin accumulatione3
Direction
decreasede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“ectopic expression of PyMYB107 decreased anthocyanin accumulation in tomato, strawberry and tobacco”

✓ located verbatim in the source · abstract, characters 604–703 · show in text ↑
t0

“red-skinned pear”

✓ located verbatim in the source · title, characters 71–87 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Ectopic expression of PyMYB107 decreased anthocyanin accumulation in strawberry.

Taxon
strawberryFragaria ×ananassae3
Treatment
ectopic expression of PyMYB107e3
Gene
PyMYB107e3
Outcome
anthocyanin accumulatione3
Direction
decreasede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e3

“ectopic expression of PyMYB107 decreased anthocyanin accumulation in tomato, strawberry and tobacco”

✓ located verbatim in the source · abstract, characters 604–703 · show in text ↑
t0

“red-skinned pear”

✓ located verbatim in the source · title, characters 71–87 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Ectopic expression of PyMYB107 decreased anthocyanin accumulation in tobacco.

Treatment
ectopic expression of PyMYB107e3
Gene
PyMYB107e3
Outcome
anthocyanin accumulatione3
Direction
decreasede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e3

“ectopic expression of PyMYB107 decreased anthocyanin accumulation in tomato, strawberry and tobacco”

✓ located verbatim in the source · abstract, characters 604–703 · show in text ↑
t0

“red-skinned pear”

✓ located verbatim in the source · title, characters 71–87 · show in text ↑
Mechanismobservedoriginal resultnegativemeasured

Claim · model-written summary

PyMYB107 competitively binds PybHLH3 with PyMYB10/MYB114 and thereby suppresses transcriptional activation of PyANS and PyUFGT.

Gene
PybHLH3e4
Outcome
transcriptional activation of key anthocyanin biosynthesis genese4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e4

“PyMYB107 can competitively bind to PybHLH3 with PyMYB10/MYB114, thereby suppressing the transcriptional activation of key anthocyanin biosynthesis genes, PyANS and PyUFGT”

✓ located verbatim in the source · abstract, characters 705–875 · show in text ↑
t0

“red-skinned pear”

✓ located verbatim in the source · title, characters 71–87 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Mutations in the R3 domain and EAR motif of PyMYB107 eliminated its repressive activity.

Treatment
mutations within the R3 domain and EAR motif of PyMYB107e5
Gene
PyMYB107e5
Outcome
repressive activitye5
Direction
eliminatede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e5

“Site-directed mutagenesis showed that mutations within the R3 domain and EAR motif of PyMYB107 eliminated its repressive activity”

✓ located verbatim in the source · abstract, characters 877–1006 · show in text ↑
t0

“red-skinned pear”

✓ located verbatim in the source · title, characters 71–87 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

PyMYB107 expression pattern is comparable to that of PyMYB10/MYB114.

Gene
PyMYB107e6
Outcome
expression patterne6
Comparator
PyMYB10/MYB114e6

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e6

“PyMYB107 exhibited a comparable expression pattern to PyMYB10/MYB114 and was transcriptionally activated by them”

✓ located verbatim in the source · abstract, characters 1022–1134 · show in text ↑
t0

“red-skinned pear”

✓ located verbatim in the source · title, characters 71–87 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

PyMYB107 is transcriptionally activated by PyMYB10/MYB114.

Gene
PyMYB107e6
Outcome
transcriptionally activatede6
Direction
activatede6
Comparator
PyMYB10/MYB114e6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Pyrus communis
Pyrus communis · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e6

“PyMYB107 exhibited a comparable expression pattern to PyMYB10/MYB114 and was transcriptionally activated by them”

✓ located verbatim in the source · abstract, characters 1022–1134 · show in text ↑
t0

“red-skinned pear”

✓ located verbatim in the source · title, characters 71–87 · show in text ↑

overexpression · quality: phytochemicals · Fragaria x ananassa (strawberry)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

overexpression · quality: phytochemicals · Solanum lycopersicum (tomato)Positive and negative results

3 papers: 1 positive, 2 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
See all 3 papers →

overexpression · quality: phytochemicals · Nicotiana tabacum (tobacco)Positive and negative results

5 papers: 2 positive, 3 negative or no effect

2 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. positive
  3. negative

1 paper more in this group

See all 5 papers →

loss of function · quality: phytochemicals · Pyrus communis (pear)Positive and negative results

7 papers: 2 positive, 5 negative or no effect

1 paper in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. negative
  3. negative

3 papers more in this group

See all 7 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.