Paper · 2015 · Journal of Experimental Botany

KNOTTED1-LIKE HOMEOBOX 3: a new regulator of symbiotic nodule development

M. Azarakhsh; A. N. Kirienko; V. A. Zhukov; et al.

8
claims
16
verbatim quotes
79
citations
3
research areas
✓
Open access · cc-by

Abstract

KNOX transcription factors (TFs) regulate different aspects of plant development essentially through their effects on phytohormone metabolism. In particular, KNOX TF SHOOTMERISTEMLESS activates the cytokinin biosynthesis ISOPENTENYL TRANSFERASE (IPT) genes in the shoot apical meristem. However, the role of KNOX TFs in symbiotic nodule development and their possible effects on phytohormone metabolism during nodulation have not been studied to date. Cytokinin is a well-known regulator of nodule development, playing the key role in the regulation of cell division during nodule primordium formation. Recently, the activation of IPT genes was shown to take place during nodulation. Therefore, it was hypothesized that KNOX TFs may regulate nodule development and activate cytokinin biosynthesis upon nodulation. This study analysed the expression of different KNOX genes in Medicago truncatula Gaertn. and Pisum sativum L. Among them, the KNOX3 gene was upregulated in response to rhizobial inoculation in both species. pKNOX3::GUS activity was observed in developing nodule primordium. KNOX3 ectopic expression caused the formation of nodule-like structures on transgenic root without bacterial inoculation, a phenotype similar to one described previously for legumes with constitutive activation of the cytokinin receptor. Furthermore, in transgenic roots with MtKNOX3 knockdown, downregulation of A-type cytokinin response genes was found, as well as the MtIPT3 and LONELYGUY2 (MtLOG2) gene being involved in cytokinin activation. Taken together, these findings suggest that KNOX3 gene is involved in symbiotic nodule development and may regulate cytokinin biosynthesis/activation upon nodule development in legume plants.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

KNOX3 was upregulated after rhizobial inoculation in Medicago truncatula.

Taxon
Medicago truncatulaMedicago truncatulae0
Treatment
rhizobial inoculatione1
Interactor
rhizobiale1symbiont
Gene
KNOX3e1
Outcome
KNOX3 genee1
Direction
upregulatede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago truncatula
Medicago truncatula · TaxonNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Medicago truncatula Gaertn. and Pisum sativum L.”

✓ located verbatim in the source · abstract, characters 876–924 · show in text ↑
e1

“the KNOX3 gene was upregulated in response to rhizobial inoculation in both species.”

✓ located verbatim in the source · abstract, characters 937–1021 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

KNOX3 was upregulated after rhizobial inoculation in Pisum sativum.

Taxon
Pisum sativumLathyrus oleraceuse0
Treatment
rhizobial inoculatione1
Interactor
rhizobiale1symbiont
Gene
KNOX3e1
Outcome
KNOX3 genee1
Direction
upregulatede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Medicago truncatula Gaertn. and Pisum sativum L.”

✓ located verbatim in the source · abstract, characters 876–924 · show in text ↑
e1

“the KNOX3 gene was upregulated in response to rhizobial inoculation in both species.”

✓ located verbatim in the source · abstract, characters 937–1021 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

pKNOX3::GUS activity was observed in developing nodule primordium.

Taxon
Medicago truncatulaMedicago truncatulae0
Organ / stage
developing nodule primordiume1
Gene
pKNOX3::GUSe1
Outcome
pKNOX3::GUS activitye1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago truncatula
Medicago truncatula · TaxonNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Medicago truncatula Gaertn. and Pisum sativum L.”

✓ located verbatim in the source · abstract, characters 876–924 · show in text ↑
e1

“pKNOX3::GUS activity was observed in developing nodule primordium.”

✓ located verbatim in the source · abstract, characters 1022–1088 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

KNOX3 ectopic expression caused nodule-like structures on transgenic roots without bacterial inoculation.

Taxon
Medicago truncatulaMedicago truncatulae0
Organ / stage
transgenic roote1
Treatment
KNOX3 ectopic expressione1
Gene
KNOX3e1
Outcome
nodule-like structurese1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago truncatula
Medicago truncatula · TaxonNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Medicago truncatula Gaertn. and Pisum sativum L.”

✓ located verbatim in the source · abstract, characters 876–924 · show in text ↑
e1

“KNOX3 ectopic expression caused the formation of nodule-like structures on transgenic root without bacterial inoculation”

✓ located verbatim in the source · abstract, characters 1089–1209 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

MtKNOX3 knockdown downregulated A-type cytokinin response genes.

Taxon
Medicago truncatulaMedicago truncatulae0
Treatment
MtKNOX3 knockdowne1
Gene
A-type cytokinin response genese1
Outcome
A-type cytokinin response genese1
Direction
downregulatione1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago truncatula
Medicago truncatula · TaxonNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Medicago truncatula Gaertn. and Pisum sativum L.”

✓ located verbatim in the source · abstract, characters 876–924 · show in text ↑
e1

“in transgenic roots with MtKNOX3 knockdown, downregulation of A-type cytokinin response genes was found”

✓ located verbatim in the source · abstract, characters 1340–1443 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

MtKNOX3 knockdown downregulated MtIPT3.

Taxon
Medicago truncatulaMedicago truncatulae0
Treatment
MtKNOX3 knockdowne1
Gene
MtIPT3e1
Outcome
MtIPT3e1
Direction
downregulatione1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago truncatula
Medicago truncatula · TaxonNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Medicago truncatula Gaertn. and Pisum sativum L.”

✓ located verbatim in the source · abstract, characters 876–924 · show in text ↑
e1

“in transgenic roots with MtKNOX3 knockdown, downregulation of A-type cytokinin response genes was found, as well as the MtIPT3 and LONELYGUY2 (MtLOG2) gene”

✓ located verbatim in the source · abstract, characters 1340–1495 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

MtKNOX3 knockdown downregulated MtLOG2.

Taxon
Medicago truncatulaMedicago truncatulae0
Treatment
MtKNOX3 knockdowne1
Gene
MtLOG2e1
Outcome
MtLOG2e1
Direction
downregulatione1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago truncatula
Medicago truncatula · TaxonNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Medicago truncatula Gaertn. and Pisum sativum L.”

✓ located verbatim in the source · abstract, characters 876–924 · show in text ↑
e1

“in transgenic roots with MtKNOX3 knockdown, downregulation of A-type cytokinin response genes was found, as well as the MtIPT3 and LONELYGUY2 (MtLOG2) gene”

✓ located verbatim in the source · abstract, characters 1340–1495 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

KNOX3 may regulate cytokinin biosynthesis or activation during nodule development.

Taxon
Medicago truncatulaMedicago truncatulae0
Organ / stage
nodule developmente1
Gene
KNOX3e1
Outcome
cytokinin biosynthesis/activatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago truncatula
Medicago truncatula · TaxonNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Medicago truncatula Gaertn. and Pisum sativum L.”

✓ located verbatim in the source · abstract, characters 876–924 · show in text ↑
e1

“KNOX3 gene is involved in symbiotic nodule development and may regulate cytokinin biosynthesis/activation upon nodule development”

✓ located verbatim in the source · abstract, characters 1580–1709 · show in text ↑

inoculation · molecular: expression · Lathyrus oleraceus (pea)Positive and negative results

8 papers: 7 positive, 1 negative or no effect

6 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

4 papers more in this group

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inoculation · molecular: expression · Medicago truncatula (barrel medic)Positive and negative results

12 papers: 10 positive, 2 negative or no effect

9 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

8 papers more in this group

See all 12 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.