Paper · 2024 · Nature Communications

Enhanced stress resilience in potato by deletion of Parakletos

Muhammad Awais Zahid; Nam Phuong Kieu; Frida Meijer Carlsen; et al.

10
claims
19
verbatim quotes
12
citations
4
research areas
✓
Open access · cc-by

Abstract

Abstract Continued climate change impose multiple stressors on crops, including pathogens, salt, and drought, severely impacting agricultural productivity. Innovative solutions are necessary to develop resilient crops. Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility. We show that knockout or silencing of Parakletos enhances resistance to oomycete, fungi, bacteria, salt, and drought, whereas its overexpression reduces resistance. In response to biotic stimuli, Parakletos -overexpressing plants exhibit reduced amplitude of reactive oxygen species and Ca 2+ signalling, and silencing Parakletos does the opposite. Parakletos homologues have been identified in all major crops. Consecutive years of field trials demonstrate that Parakletos deletion enhances resistance to Phytophthora infestans and increases yield. These findings demark a susceptibility gene, which can be exploited to enhance crop resilience towards abiotic and biotic stresses in a low-input agriculture.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Parakletos contributes to disease susceptibility in potato.

Gene
Parakletose1
Outcome
disease susceptibilitye1

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility”

✓ located verbatim in the source · abstract, characters 219–349 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Knockout or silencing of Parakletos enhanced resistance of potato to oomycete, fungi and bacteria.

Treatment
knockout or silencing of Parakletose2
Interactor
oomycetee2pathogen
Gene
Parakletose2
Outcome
resistance to oomycete, fungi, bacteriae2
Direction
enhancese2
Qualifier
fungi, bacteriae2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility”

✓ located verbatim in the source · abstract, characters 219–349 · show in text ↑
e2

“We show that knockout or silencing of Parakletos enhances resistance to oomycete, fungi, bacteria, salt, and drought, whereas its overexpression reduces resistance”

✓ located verbatim in the source · abstract, characters 351–514 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Knockout or silencing of Parakletos enhanced potato resistance to salt and drought.

Treatment
knockout or silencing of Parakletose2
Gene
Parakletose2
Outcome
resistancee2
Direction
enhancese2
Qualifier
salt, and droughte2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility”

✓ located verbatim in the source · abstract, characters 219–349 · show in text ↑
e2

“We show that knockout or silencing of Parakletos enhances resistance to oomycete, fungi, bacteria, salt, and drought, whereas its overexpression reduces resistance”

✓ located verbatim in the source · abstract, characters 351–514 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Overexpression of Parakletos reduced potato resistance.

Treatment
its overexpressione3
Gene
Parakletose1
Outcome
resistancee3
Direction
reducese3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility”

✓ located verbatim in the source · abstract, characters 219–349 · show in text ↑
e3

“whereas its overexpression reduces resistance”

✓ located verbatim in the source · abstract, characters 469–514 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Parakletos-overexpressing potato plants showed reduced amplitude of reactive oxygen species and Ca 2+ signalling in response to biotic stimuli.

Treatment
Parakletos -overexpressinge4
Gene
Parakletose4
Outcome
amplitude of reactive oxygen species and Ca 2+ signallinge4
Direction
reducede4
Qualifier
In response to biotic stimulie4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility”

✓ located verbatim in the source · abstract, characters 219–349 · show in text ↑
e4

“In response to biotic stimuli, Parakletos -overexpressing plants exhibit reduced amplitude of reactive oxygen species and Ca 2+ signalling, and silencing Parakletos does the opposite”

✓ located verbatim in the source · abstract, characters 516–698 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silencing Parakletos in potato had the opposite effect on reactive oxygen species and Ca 2+ signalling in response to biotic stimuli.

Treatment
silencing Parakletose4
Gene
Parakletose4
Outcome
reactive oxygen species and Ca 2+ signallinge4
Direction
the oppositee4
Qualifier
In response to biotic stimulie4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility”

✓ located verbatim in the source · abstract, characters 219–349 · show in text ↑
e4

“In response to biotic stimuli, Parakletos -overexpressing plants exhibit reduced amplitude of reactive oxygen species and Ca 2+ signalling, and silencing Parakletos does the opposite”

✓ located verbatim in the source · abstract, characters 516–698 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Parakletos homologues were identified in all major crops.

Gene
Parakletos homologuese5
Outcome
identifiede5
Qualifier
in all major cropse5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility”

✓ located verbatim in the source · abstract, characters 219–349 · show in text ↑
e5

“Parakletos homologues have been identified in all major crops”

✓ located verbatim in the source · abstract, characters 700–761 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Parakletos deletion enhanced potato resistance to Phytophthora infestans in consecutive years of field trials.

Treatment
Parakletos deletione6
Interactor
Phytophthora infestansPhytophthora infestanse6pathogen
Gene
Parakletose6
Outcome
resistance to Phytophthora infestanse6
Direction
enhancese6
Setting
Consecutive years of field trialse6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility”

✓ located verbatim in the source · abstract, characters 219–349 · show in text ↑
e6

“Consecutive years of field trials demonstrate that Parakletos deletion enhances resistance to Phytophthora infestans and increases yield”

✓ located verbatim in the source · abstract, characters 763–899 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Parakletos deletion increased potato yield in consecutive years of field trials.

Treatment
Parakletos deletione6
Outcome
yielde6
Direction
increasese6
Setting
Consecutive years of field trialse6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility”

✓ located verbatim in the source · abstract, characters 219–349 · show in text ↑
e6

“Consecutive years of field trials demonstrate that Parakletos deletion enhances resistance to Phytophthora infestans and increases yield”

✓ located verbatim in the source · abstract, characters 763–899 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The Parakletos susceptibility gene can be exploited to enhance potato crop resilience in low-input agriculture.

Outcome
enhance crop resiliencee7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Here, using quantitative potato proteomics, we identify Parakletos, a thylakoid protein that contributes to disease susceptibility”

✓ located verbatim in the source · abstract, characters 219–349 · show in text ↑
e7

“These findings demark a susceptibility gene, which can be exploited to enhance crop resilience towards abiotic and biotic stresses in a low-input agriculture”

✓ located verbatim in the source · abstract, characters 901–1058 · show in text ↑

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loss of function · physiology: oxidative · Solanum tuberosum (potato)Positive and negative results

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loss of function · yield · Solanum tuberosum (potato)Positive and negative results

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loss of function · Phytophthora infestans · Solanum tuberosum (potato)Positive and negative results

31 papers: 16 positive, 15 negative or no effect

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.