Paper · 2015 · Journal of Experimental Botany

Transcription factorStWRKY1regulates phenylpropanoid metabolites conferring late blight resistance in potato

Kalenahalli N. Yogendra; Arun Kumar; Kobir Sarkar; et al.

6
claims
12
verbatim quotes
137
citations
3
research areas
✓
Open access · cc-by

Abstract

Quantitative resistance is polygenically controlled and durable, but the underlying molecular and biochemical mechanisms are poorly understood. Secondary cell wall thickening is a critical process in quantitative resistance, regulated by transcriptional networks. This paper provides compelling evidence on the functionality of StWRKY1 transcription factor, in a compatible interaction of potato-Phytophthora infestans, to extend our knowledge on the regulation of the metabolic pathway genes leading to strengthening the secondary cell wall. A metabolomics approach was used to identify resistance-related metabolites belonging to the phenylpropanoid pathway and their biosynthetic genes regulated by StWRKY1. The StWRKY1 gene in resistant potato was silenced to decipher its role in the regulation of phenylpropanoid pathway genes to strengthen the secondary cell wall. Sequencing of the promoter region of StWRKY1 in susceptible genotypes revealed the absence of heat shock elements (HSEs). Simultaneous induction of both the heat shock protein (sHSP17.8) and StWRKY1 following pathogen invasion enables functioning of the latter to interact with the HSE present in the resistant StWRKY1 promoter region. EMSA and luciferase transient expression assays further revealed direct binding of StWRKY1 to promoters of hydroxycinnamic acid amide (HCAA) biosynthetic genes encoding 4-coumarate:CoA ligase and tyramine hydroxycinnamoyl transferase. Silencing of the StWRKY1 gene was associated with signs of reduced late blight resistance by significantly increasing the pathogen biomass and decreasing the abundance of HCAAs. This study provides convincing evidence on the role of StWRKY1 in the regulation of downstream genes to biosynthesize HCAAs, which are deposited to reinforce secondary cell walls.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

Susceptible potato genotypes lacked heat shock elements in the StWRKY1 promoter.

Material
susceptible genotypese0
Gene
StWRKY1e0
Outcome
absence of heat shock elements (HSEs)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Sequencing of the promoter region of StWRKY1 in susceptible genotypes revealed the absence of heat shock elements (HSEs)”

✓ located verbatim in the source · abstract, characters 872–992 · show in text ↑
t0

“potato”

✓ located verbatim in the source · title, characters 102–108 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Pathogen invasion induced sHSP17.8 and StWRKY1 together.

Interactor
Phytophthora infestansPhytophthora infestanst0pathogen
Gene
sHSP17.8e0
Outcome
Simultaneous induction of both the heat shock protein (sHSP17.8) and StWRKY1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Simultaneous induction of both the heat shock protein (sHSP17.8) and StWRKY1 following pathogen invasion”

✓ located verbatim in the source · abstract, characters 994–1098 · show in text ↑
t0

“potato-Phytophthora infestans”

✓ located verbatim in the source · abstract, characters 389–418 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

StWRKY1 bound promoters of genes encoding 4-coumarate:CoA ligase and tyramine hydroxycinnamoyl transferase.

Gene
StWRKY1e0
Outcome
direct binding of StWRKY1 to promoters of hydroxycinnamic acid amide (HCAA) biosynthetic genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“direct binding of StWRKY1 to promoters of hydroxycinnamic acid amide (HCAA) biosynthetic genes encoding 4-coumarate:CoA ligase and tyramine hydroxycinnamoyl transferase”

✓ located verbatim in the source · abstract, characters 1273–1441 · show in text ↑
t0

“potato”

✓ located verbatim in the source · title, characters 102–108 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Silencing StWRKY1 significantly increased pathogen biomass in potato.

Treatment
Silencing of the StWRKY1 genee0
Interactor
Phytophthora infestansPhytophthora infestanst0pathogen
Gene
StWRKY1e0
Outcome
pathogen biomasse0
Direction
increasinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Silencing of the StWRKY1 gene was associated with signs of reduced late blight resistance by significantly increasing the pathogen biomass and decreasing the abundance of HCAAs”

✓ located verbatim in the source · abstract, characters 1443–1619 · show in text ↑
t0

“potato-Phytophthora infestans”

✓ located verbatim in the source · abstract, characters 389–418 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing StWRKY1 decreased HCAA abundance in potato.

Treatment
Silencing of the StWRKY1 genee0
Gene
StWRKY1e0
Outcome
abundance of HCAAse0
Direction
decreasinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Silencing of the StWRKY1 gene was associated with signs of reduced late blight resistance by significantly increasing the pathogen biomass and decreasing the abundance of HCAAs”

✓ located verbatim in the source · abstract, characters 1443–1619 · show in text ↑
t0

“potato”

✓ located verbatim in the source · title, characters 102–108 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

StWRKY1 regulates downstream genes that synthesize HCAAs deposited to reinforce secondary cell walls.

Gene
StWRKY1e0
Outcome
reinforce secondary cell wallse0
Qualifier
HCAAse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“StWRKY1 in the regulation of downstream genes to biosynthesize HCAAs, which are deposited to reinforce secondary cell walls”

✓ located verbatim in the source · abstract, characters 1676–1799 · show in text ↑
t0

“potato”

✓ located verbatim in the source · title, characters 102–108 · show in text ↑

loss of function · Phytophthora infestans · Solanum tuberosum (potato)Positive and negative results

31 papers: 16 positive, 15 negative or no effect

14 papers in the same direction as this paper · 16 in the opposite direction

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  2. positive
  3. positive

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.