Paper · 2022 · Frontiers in Nutrition

Transcriptomic and physiological analysis reveals the possible mechanism of ultrasound inhibiting strawberry (Fragaria × ananassa Duch.) postharvest softening

Junyi Zhang; Hui Jiang; Yutong Li; et al.

12
claims
23
verbatim quotes
23
citations
3
research areas
✓
Open access · cc-by

Abstract

Ultrasound effectively inhibited strawberry softening but the mechanism was not clear. In this study, physical data including firmness, soluble pectin (SP) contents, pectin esterase (PE), polygalacturonase (PG) activity and transcriptome sequencing data were analyzed to explore the mechanism of strawberry response to ultrasonic treatment. After 24 days storage, the firmness reduction rate and soluble contents (SP) increased rate of the strawberry treated with ultrasound (25 kHz, 0.15 W/cm 2 ) for 3 min decreased 41.70 and 63.12% compared with the control, respectively. While the PG and PE enzyme activities of ultrasound-treated strawberries were significantly lower than control after storage for 18 days. A total of 1,905 diferentially expressed genes (DEGs) were identified between ultrasound-treated and control, with 714 genes upregulated and 1,254 genes downregulated, including 56 genes in reactive oxygen species (ROS), auxin (AUX), ethylene (ETH) and jasmonic acid (JA) signaling pathways. At 0 h, 15 genes including LOX, JMT, ARP, SKP, SAUR, IAA, ARF , and LAX were significantly upregulated compared with the control group, which means reactive oxygen specie, auxin, ethylene and jasmonic acid-mediated signaling pathway respond to ultrasound immediately. ERF109, ERF110 , and ACS1_2_6 downregulated before 2 days storage indicated ethylene signaling pathway was inhibited, while after 2 days, 9 genes including ERF027, ERF109 , and ERF110 were significantly upregulated indicating that the response of the ethylene signaling pathway was lagging. Therefore, in strawberry ultrasound enhanced ROS scavenging and activated JA biosynthesis, which acts as a signal for delaying the activation of ET signaling pathway, thus suppressing the activity of pectin-degrading enzymes PE and PG, and ultimately inhibiting postharvest softening.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ultrasound reduced the firmness reduction rate by 41.70 after 24 days.

Taxon
strawberryFragaria ×ananassae0
Treatment
ultrasound (25 kHz, 0.15 W/cm 2 ) for 3 mine0
Outcome
firmness reduction ratee0
Direction
decreasede0
Value
41.70e0
Qualifier
After 24 days storagee0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“After 24 days storage, the firmness reduction rate and soluble contents (SP) increased rate of the strawberry treated with ultrasound (25 kHz, 0.15 W/cm 2 ) for 3 min decreased 41.70 and 63.12% compared with the control, respectively.”

✓ located verbatim in the source · abstract, characters 341–575 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ultrasound reduced the SP increase rate by 63.12% after 24 days.

Taxon
strawberryFragaria ×ananassae0
Treatment
ultrasound (25 kHz, 0.15 W/cm 2 ) for 3 mine0
Outcome
soluble contents (SP) increased ratee0
Direction
decreasede0
Value
63.12%e0
Qualifier
After 24 days storagee0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“After 24 days storage, the firmness reduction rate and soluble contents (SP) increased rate of the strawberry treated with ultrasound (25 kHz, 0.15 W/cm 2 ) for 3 min decreased 41.70 and 63.12% compared with the control, respectively.”

✓ located verbatim in the source · abstract, characters 341–575 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

PG and PE activities were significantly lower after ultrasound and 18 days storage.

Taxon
strawberriesFragaria ×ananassae0
Treatment
ultrasound-treatede0
Outcome
PG and PE enzyme activitiese0
Direction
lowere0
Qualifier
after storage for 18 dayse0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“While the PG and PE enzyme activities of ultrasound-treated strawberries were significantly lower than control after storage for 18 days.”

✓ located verbatim in the source · abstract, characters 576–713 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

There were 1,905 differentially expressed genes between ultrasound and control.

Taxon
strawberryFragaria ×ananassat0
Outcome
diferentially expressed genes (DEGs)e0
Value
1,905e0
Comparator
controle0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“A total of 1,905 diferentially expressed genes (DEGs) were identified between ultrasound-treated and control, with 714 genes upregulated and 1,254 genes downregulated, including 56 genes in reactive oxygen species (ROS), auxin (AUX), ethylene (ETH) and jasmonic acid (JA) signaling pathways.”

✓ located verbatim in the source · abstract, characters 714–1005 · show in text ↑
t0

“strawberry”

✓ located verbatim in the source · title, characters 98–108 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ultrasound upregulated 714 genes.

Taxon
strawberryFragaria ×ananassat0
Treatment
ultrasound-treatede0
Outcome
genese0
Direction
upregulatede0
Value
714e0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“A total of 1,905 diferentially expressed genes (DEGs) were identified between ultrasound-treated and control, with 714 genes upregulated and 1,254 genes downregulated, including 56 genes in reactive oxygen species (ROS), auxin (AUX), ethylene (ETH) and jasmonic acid (JA) signaling pathways.”

✓ located verbatim in the source · abstract, characters 714–1005 · show in text ↑
t0

“strawberry”

✓ located verbatim in the source · title, characters 98–108 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ultrasound downregulated 1,254 genes.

Taxon
strawberryFragaria ×ananassat0
Treatment
ultrasound-treatede0
Outcome
genese0
Direction
downregulatede0
Value
1,254e0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“A total of 1,905 diferentially expressed genes (DEGs) were identified between ultrasound-treated and control, with 714 genes upregulated and 1,254 genes downregulated, including 56 genes in reactive oxygen species (ROS), auxin (AUX), ethylene (ETH) and jasmonic acid (JA) signaling pathways.”

✓ located verbatim in the source · abstract, characters 714–1005 · show in text ↑
t0

“strawberry”

✓ located verbatim in the source · title, characters 98–108 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Differentially expressed genes included 56 in ROS, auxin, ethylene and JA pathways.

Taxon
strawberryFragaria ×ananassat0
Outcome
genese0
Value
56e0
Qualifier
reactive oxygen species (ROS), auxin (AUX), ethylene (ETH) and jasmonic acid (JA) signaling pathwayse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“including 56 genes in reactive oxygen species (ROS), auxin (AUX), ethylene (ETH) and jasmonic acid (JA) signaling pathways.”

✓ located verbatim in the source · abstract, characters 882–1005 · show in text ↑
t0

“strawberry”

✓ located verbatim in the source · title, characters 98–108 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

At zero hours 15 genes were significantly upregulated by ultrasound.

Taxon
strawberryFragaria ×ananassat0
Treatment
ultrasounde1
Gene
LOX, JMT, ARP, SKP, SAUR, IAA, ARF , and LAXe0
Outcome
genese0
Direction
upregulatede0
Value
15e0
Qualifier
At 0 he0
Comparator
control groupe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“At 0 h, 15 genes including LOX, JMT, ARP, SKP, SAUR, IAA, ARF , and LAX were significantly upregulated compared with the control group”

✓ located verbatim in the source · abstract, characters 1006–1140 · show in text ↑
t0

“strawberry”

✓ located verbatim in the source · title, characters 98–108 · show in text ↑
e1

“respond to ultrasound immediately”

✓ located verbatim in the source · abstract, characters 1239–1272 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer immediate signaling responses to ultrasound.

Taxon
strawberryFragaria ×ananassat0
Treatment
ultrasounde0
Outcome
signaling pathway responde0
Qualifier
immediatelye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“which means reactive oxygen specie, auxin, ethylene and jasmonic acid-mediated signaling pathway respond to ultrasound immediately.”

✓ located verbatim in the source · abstract, characters 1142–1273 · show in text ↑
t0

“strawberry”

✓ located verbatim in the source · title, characters 98–108 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ERF109, ERF110 and ACS1_2_6 were downregulated before two days, indicating ethylene pathway inhibition.

Taxon
strawberryFragaria ×ananassat0
Treatment
ultrasound-treatede1
Outcome
ERF109, ERF110 , and ACS1_2_6e0
Direction
downregulatede0
Qualifier
before 2 days storagee0
Comparator
controle1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ERF109, ERF110 , and ACS1_2_6 downregulated before 2 days storage indicated ethylene signaling pathway was inhibited”

✓ located verbatim in the source · abstract, characters 1274–1390 · show in text ↑
t0

“strawberry”

✓ located verbatim in the source · title, characters 98–108 · show in text ↑
e1

“ultrasound-treated and control”

✓ located verbatim in the source · abstract, characters 792–822 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

After two days nine ethylene genes were significantly upregulated, indicating a lagging response.

Taxon
strawberryFragaria ×ananassat0
Treatment
ultrasound-treatede1
Gene
ERF027, ERF109 , and ERF110e0
Outcome
genese0
Direction
upregulatede0
Value
9e0
Qualifier
after 2 dayse0
Comparator
controle1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“while after 2 days, 9 genes including ERF027, ERF109 , and ERF110 were significantly upregulated indicating that the response of the ethylene signaling pathway was lagging.”

✓ located verbatim in the source · abstract, characters 1392–1564 · show in text ↑
t0

“strawberry”

✓ located verbatim in the source · title, characters 98–108 · show in text ↑
e1

“ultrasound-treated and control”

✓ located verbatim in the source · abstract, characters 792–822 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors propose ultrasound enhances ROS scavenging and JA biosynthesis to delay ET signaling, suppress pectin enzymes and inhibit softening.

Taxon
strawberryFragaria ×ananassae0
Treatment
ultrasounde0
Outcome
inhibiting postharvest softeninge0
Qualifier
enhanced ROS scavenging and activated JA biosynthesise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Therefore, in strawberry ultrasound enhanced ROS scavenging and activated JA biosynthesis, which acts as a signal for delaying the activation of ET signaling pathway, thus suppressing the activity of pectin-degrading enzymes PE and PG, and ultimately inhibiting postharvest softening.”

✓ located verbatim in the source · abstract, characters 1565–1849 · show in text ↑

physical treatment · quality: postharvest · Fragaria x ananassa (strawberry)Positive and negative results

10 papers: 9 positive, 1 negative or no effect

8 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

6 papers more in this group

See all 10 papers →

physical treatment · molecular: metabolites · Fragaria x ananassa (strawberry)Results agree

6 papers: 6 positive, 0 negative or no effect

5 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

2 papers more in this group

See all 6 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.