Paper · 2022 · Frontiers in Plant Science

Association mapping uncovers maize ZmbZIP107 regulating root system architecture and lead absorption under lead stress

Fengxia Hou; Kai Liu; Na Zhang; et al.

10
claims
11
verbatim quotes
18
citations
2
research areas
✓
Open access · cc-by

Abstract

Lead (Pb) is a highly toxic contaminant to living organisms and the environment. Excessive Pb in soils affects crop yield and quality, thus threatening human health via the food chain. Herein, we investigated Pb tolerance among a maize association panel using root bushiness (BSH) under Pb treatment as an indicator. Through a genome-wide association study of relative BSH, we identified four single nucleotide polymorphisms (SNPs) and 30 candidate genes associated with Pb tolerance in maize seedlings. Transcriptome analysis showed that four of the 30 genes were differentially responsive to Pb treatment between two maize lines with contrasting Pb tolerance. Among these, the ZmbZIP107 transcription factor was confirmed as the key gene controlling maize tolerance to Pb by using gene-based association studies. Two 5’ UTR_variants in ZmbZIP107 affected its expression level and Pb tolerance among different maize lines. ZmbZIP107 protein was specifically targeted to the nucleus and ZmbZIP107 mRNA showed the highest expression in maize seedling roots among different tissues. Heterologous expression of ZmbZIP107 enhanced rice tolerance to Pb stress and decreased Pb absorption in the roots. Our study provided the basis for revelation of the molecular mechanism underlying Pb tolerance and contributed to cultivation of Pb-tolerant varieties in maize.

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Claims 10

Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

GWAS identified four SNPs associated with maize Pb tolerance.

Taxon
maizeZea mayse0
Gene
single nucleotide polymorphisms (SNPs)e0
Outcome
Pb tolerancee0
Value
foure0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“we identified four single nucleotide polymorphisms (SNPs) and 30 candidate genes associated with Pb tolerance in maize seedlings”

✓ located verbatim in the source · abstract, characters 374–502 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

GWAS identified 30 candidate genes associated with maize Pb tolerance.

Taxon
maizeZea mayse0
Gene
candidate genese0
Outcome
Pb tolerancee0
Value
30e0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“we identified four single nucleotide polymorphisms (SNPs) and 30 candidate genes associated with Pb tolerance in maize seedlings”

✓ located verbatim in the source · abstract, characters 374–502 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Four candidate genes responded differentially to Pb treatment in contrasting maize lines.

Taxon
maizeZea mayse0
Material
two maize linese0
Gene
genese0
Outcome
differentially responsive to Pb treatmente0
Value
foure0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“four of the 30 genes were differentially responsive to Pb treatment between two maize lines with contrasting Pb tolerance”

✓ located verbatim in the source · abstract, characters 539–660 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

ZmbZIP107 was confirmed as a key gene controlling maize Pb tolerance.

Taxon
maizeZea mayse0
Gene
ZmbZIP107e0
Outcome
maize tolerance to Pbe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ZmbZIP107 transcription factor was confirmed as the key gene controlling maize tolerance to Pb”

✓ located verbatim in the source · abstract, characters 679–773 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Two 5’ UTR variants in ZmbZIP107 affected expression level.

Taxon
maizeZea mayse0
Material
different maize linese0
Gene
ZmbZIP107e0
Outcome
expression levele0
Value
Twoe0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Two 5’ UTR_variants in ZmbZIP107 affected its expression level and Pb tolerance among different maize lines.”

✓ located verbatim in the source · abstract, characters 815–923 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Two 5’ UTR variants in ZmbZIP107 affected Pb tolerance among maize lines.

Taxon
maizeZea mayse0
Material
different maize linese0
Gene
ZmbZIP107e0
Outcome
Pb tolerancee0
Value
Twoe0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Two 5’ UTR_variants in ZmbZIP107 affected its expression level and Pb tolerance among different maize lines.”

✓ located verbatim in the source · abstract, characters 815–923 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmbZIP107 protein localized to the nucleus.

Taxon
maizeZea mayse1
Gene
ZmbZIP107e0
Outcome
targeted to the nucleuse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ZmbZIP107 protein was specifically targeted to the nucleus”

✓ located verbatim in the source · abstract, characters 924–982 · show in text ↑
e1

“maize seedling roots among different tissues”

✓ located verbatim in the source · abstract, characters 1035–1079 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmbZIP107 mRNA expression was highest in maize seedling roots.

Taxon
maizeZea mayse0
Organ / stage
seedling rootse0
Gene
ZmbZIP107e0
Outcome
expressione0
Direction
higheste0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ZmbZIP107 mRNA showed the highest expression in maize seedling roots among different tissues.”

✓ located verbatim in the source · abstract, characters 987–1080 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Heterologous ZmbZIP107 expression increased rice Pb tolerance.

Treatment
Heterologous expression of ZmbZIP107e0
Gene
ZmbZIP107e0
Outcome
rice tolerance to Pb stresse0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Heterologous expression of ZmbZIP107 enhanced rice tolerance to Pb stress and decreased Pb absorption in the roots.”

✓ located verbatim in the source · abstract, characters 1081–1196 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Heterologous ZmbZIP107 expression decreased Pb absorption in rice roots.

Organ / stage
rootse0
Treatment
Heterologous expression of ZmbZIP107e0
Gene
ZmbZIP107e0
Outcome
Pb absorptione0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Heterologous expression of ZmbZIP107 enhanced rice tolerance to Pb stress and decreased Pb absorption in the roots.”

✓ located verbatim in the source · abstract, characters 1081–1196 · show in text ↑

overexpression · nutrient: content · Oryza sativa (rice)Positive and negative results

6 papers: 5 positive, 1 negative or no effect

4 papers in the same direction as this paper · 1 in the opposite direction

  1. no effect
  2. positive
  3. positive

2 papers more in this group

See all 6 papers →

overexpression · disease · Oryza sativa (rice)Positive and negative results

31 papers: 24 positive, 7 negative or no effect

23 papers in the same direction as this paper · 7 in the opposite direction

  1. negative
  2. negative
  3. negative

27 papers more in this group

See all 31 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.