Paper · 2020 · AoB Plants

Transcriptome analysis in osmo-primed tomato seeds with enhanced longevity by heat shock treatment

Thiago Barbosa Batista; Geysson Javier Fernandez; Tiago Alexandre da Silva; et al.

9
claims
24
verbatim quotes
21
citations
2
research areas
✓
Open access · cc-by

Abstract

Abstract Seed priming is widely used in commercial seeds and its main function is to accelerate and synchronize seed germination. Undesirably, primed seeds show reduced longevity and treatments like heat shock have been shown to improve longevity in primed seeds. Nonetheless, the effect of heat shock treatment on primed seeds at the mRNA level is not known. Thus, the aim of this work was to investigate the effect of heat shock treatment on the longevity of primed tomato (Solanum lycopersicum) seeds at the physiological and transcriptome levels. Tomato seeds were primed and dried (control). Alternatively, primed seeds were subjected to heat shock treatment (38 °C/32 % relative humidity) before drying. Germination, vigor and longevity were evaluated. Transcriptome analysis was performed by RNA sequencing (RNA-seq) from biological samples collected immediately after priming and another samples collected from primed seeds followed by the heat shock treatments. The gene expression was validated by quantitative real time PCR (RT-qPCR). We showed that applying heat shock treatment after priming increased germination speed, enhanced seed longevity and preserved the vigor during storage of primed tomato seeds. Through transcriptome analysis, 368 differentially expressed genes were identified, from which 298 genes were up-regulated and 70 were down-regulated. We showed the increase of mRNA levels of HEAT SHOCK FACTOR-like and HEAT SHOCK PROTEIN-like chaperone genes, suggesting the involvement of the proteins coded by these transcripts in the enhancement of longevity in primed tomato seeds. The heat shock treatment after priming enhances and preserves the vigor of tomato primed seeds during storage. In addition, improves seed longevity through the increase in the expression of transcripts related to protection by response to stress.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 9

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Heat shock after priming increased germination speed of primed tomato seeds.

Treatment
applying heat shock treatment after priminge1
Outcome
germination speede1
Direction
increasede1
Comparator
primed and driede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Transcriptome analysis in osmo-primed tomato seeds with enhanced longevity by heat shock treatment”

✓ located verbatim in the source · title, characters 0–98 · show in text ↑
e1

“We showed that applying heat shock treatment after priming increased germination speed, enhanced seed longevity and preserved the vigor during storage of primed tomato seeds.”

✓ located verbatim in the source · abstract, characters 1046–1220 · show in text ↑
e2

“Tomato seeds were primed and dried (control). Alternatively, primed seeds were subjected to heat shock treatment (38 °C/32 % relative humidity) before drying.”

✓ located verbatim in the source · abstract, characters 551–709 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Heat shock after priming enhanced seed longevity of primed tomato seeds.

Treatment
applying heat shock treatment after priminge1
Outcome
seed longevitye1
Direction
enhancede1
Comparator
primed and driede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Transcriptome analysis in osmo-primed tomato seeds with enhanced longevity by heat shock treatment”

✓ located verbatim in the source · title, characters 0–98 · show in text ↑
e1

“We showed that applying heat shock treatment after priming increased germination speed, enhanced seed longevity and preserved the vigor during storage of primed tomato seeds.”

✓ located verbatim in the source · abstract, characters 1046–1220 · show in text ↑
e2

“Tomato seeds were primed and dried (control). Alternatively, primed seeds were subjected to heat shock treatment (38 °C/32 % relative humidity) before drying.”

✓ located verbatim in the source · abstract, characters 551–709 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Heat shock after priming preserved the vigor of primed tomato seeds during storage.

Treatment
applying heat shock treatment after priminge1
Outcome
vigor during storagee1
Direction
preservede1
Comparator
primed and driede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Transcriptome analysis in osmo-primed tomato seeds with enhanced longevity by heat shock treatment”

✓ located verbatim in the source · title, characters 0–98 · show in text ↑
e1

“We showed that applying heat shock treatment after priming increased germination speed, enhanced seed longevity and preserved the vigor during storage of primed tomato seeds.”

✓ located verbatim in the source · abstract, characters 1046–1220 · show in text ↑
e2

“Tomato seeds were primed and dried (control). Alternatively, primed seeds were subjected to heat shock treatment (38 °C/32 % relative humidity) before drying.”

✓ located verbatim in the source · abstract, characters 551–709 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

368 differentially expressed genes were identified in the transcriptome analysis.

Outcome
differentially expressed genese3
Value
368e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Transcriptome analysis in osmo-primed tomato seeds with enhanced longevity by heat shock treatment”

✓ located verbatim in the source · title, characters 0–98 · show in text ↑
e3

“Through transcriptome analysis, 368 differentially expressed genes were identified, from which 298 genes were up-regulated and 70 were down-regulated.”

✓ located verbatim in the source · abstract, characters 1221–1371 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Heat shock up-regulated 298 genes in primed tomato seeds relative to primed and dried seeds.

Treatment
heat shock treatmente2
Outcome
genese3
Direction
up-regulatede3
Value
298 genese3
Comparator
primed and driede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Transcriptome analysis in osmo-primed tomato seeds with enhanced longevity by heat shock treatment”

✓ located verbatim in the source · title, characters 0–98 · show in text ↑
e2

“Tomato seeds were primed and dried (control). Alternatively, primed seeds were subjected to heat shock treatment (38 °C/32 % relative humidity) before drying.”

✓ located verbatim in the source · abstract, characters 551–709 · show in text ↑
e3

“Through transcriptome analysis, 368 differentially expressed genes were identified, from which 298 genes were up-regulated and 70 were down-regulated.”

✓ located verbatim in the source · abstract, characters 1221–1371 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Heat shock down-regulated 70 genes in primed tomato seeds relative to primed and dried seeds.

Treatment
heat shock treatmente2
Outcome
genese3
Direction
down-regulatede3
Value
70e3
Comparator
primed and driede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Transcriptome analysis in osmo-primed tomato seeds with enhanced longevity by heat shock treatment”

✓ located verbatim in the source · title, characters 0–98 · show in text ↑
e2

“Tomato seeds were primed and dried (control). Alternatively, primed seeds were subjected to heat shock treatment (38 °C/32 % relative humidity) before drying.”

✓ located verbatim in the source · abstract, characters 551–709 · show in text ↑
e3

“Through transcriptome analysis, 368 differentially expressed genes were identified, from which 298 genes were up-regulated and 70 were down-regulated.”

✓ located verbatim in the source · abstract, characters 1221–1371 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Heat shock increased mRNA levels of HEAT SHOCK FACTOR-like and HEAT SHOCK PROTEIN-like chaperone genes.

Treatment
heat shock treatmente2
Gene
HEAT SHOCK FACTOR-like and HEAT SHOCK PROTEIN-like chaperone genese4
Outcome
mRNA levelse4
Direction
increasee4
Comparator
primed and driede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Transcriptome analysis in osmo-primed tomato seeds with enhanced longevity by heat shock treatment”

✓ located verbatim in the source · title, characters 0–98 · show in text ↑
e2

“Tomato seeds were primed and dried (control). Alternatively, primed seeds were subjected to heat shock treatment (38 °C/32 % relative humidity) before drying.”

✓ located verbatim in the source · abstract, characters 551–709 · show in text ↑
e4

“We showed the increase of mRNA levels of HEAT SHOCK FACTOR-like and HEAT SHOCK PROTEIN-like chaperone genes, suggesting the involvement of the proteins coded by these transcripts in the enhancement of longevity in primed tomato seeds.”

✓ located verbatim in the source · abstract, characters 1372–1606 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The HSF-like and HSP-like chaperone genes are involved in enhancing seed longevity.

Gene
HEAT SHOCK FACTOR-like and HEAT SHOCK PROTEIN-like chaperone genese4
Outcome
enhancement of longevitye4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Transcriptome analysis in osmo-primed tomato seeds with enhanced longevity by heat shock treatment”

✓ located verbatim in the source · title, characters 0–98 · show in text ↑
e4

“We showed the increase of mRNA levels of HEAT SHOCK FACTOR-like and HEAT SHOCK PROTEIN-like chaperone genes, suggesting the involvement of the proteins coded by these transcripts in the enhancement of longevity in primed tomato seeds.”

✓ located verbatim in the source · abstract, characters 1372–1606 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Heat shock improves seed longevity through increased expression of transcripts related to stress protection.

Outcome
seed longevitye5
Qualifier
protection by response to stresse5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t0

“Transcriptome analysis in osmo-primed tomato seeds with enhanced longevity by heat shock treatment”

✓ located verbatim in the source · title, characters 0–98 · show in text ↑
e5

“In addition, improves seed longevity through the increase in the expression of transcripts related to protection by response to stress.”

✓ located verbatim in the source · abstract, characters 1718–1853 · show in text ↑

heat · growth · Solanum lycopersicum (tomato)Results differ

81 papers: 26 positive, 55 negative or no effect

25 papers in the same direction as this paper · 54 in the opposite direction · 1 reporting no difference from an alternative

  1. negative
  2. negative
  3. no effect

77 papers more in this group

See all 81 papers →

seed treatment · pest · Solanum lycopersicum (tomato)Positive and negative results

9 papers: 8 positive, 1 negative or no effect

7 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

5 papers more in this group

See all 9 papers →

heat · pest · Solanum lycopersicum (tomato)Positive and negative results

10 papers: 6 positive, 4 negative or no effect

5 papers in the same direction as this paper · 4 in the opposite direction

  1. negative
  2. negative
  3. negative

6 papers more in this group

See all 10 papers →

heat · molecular: expression · Solanum lycopersicum (tomato)Positive and negative results

27 papers: 13 positive, 14 negative or no effect

12 papers in the same direction as this paper · 14 in the opposite direction

  1. negative
  2. no effect
  3. negative

23 papers more in this group

See all 27 papers →

seed treatment · growth · Solanum lycopersicum (tomato)Positive and negative results

131 papers: 121 positive, 10 negative or no effect

120 papers in the same direction as this paper · 10 in the opposite direction

  1. no effect
  2. positive
  3. positive

127 papers more in this group

See all 131 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.