Paper · 2019 · Journal of Experimental Botany

Brassinosteroids act as a positive regulator of NBR1-dependent selective autophagy in response to chilling stress in tomato

Cheng Chi; Xiaomeng Li; Pingping Fang; et al.

10
claims
17
verbatim quotes
100
citations
2
research areas
✓
Open access

Abstract

Autophagy is a highly conserved and regulated catabolic process involved in the degradation of protein aggregates, which plays critical roles in eukaryotes. In plants, multiple molecular processes can induce or suppress autophagy but the mechanism of its regulation by phytohormones is poorly understood. Brassinosteroids (BRs) are steroid phytohormones that play crucial roles in plant response to stresses. Here, we investigate the role of BRs in NBR1-dependent selective autophagy in response to chilling stress in tomato. BRs and their signaling element BZR1 can induce autophagy and accumulation of the selective autophagy receptor NBR1 in tomato under chilling stress. Cold increased the stability of BZR1, which was promoted by BRs. Cold- and BR-induced increased BZR1 stability activated the transcription of several autophagy-related genes (ATGs) and NBR1 genes by directly binding to their promoters, which resulted in selective autophagy. Furthermore, silencing of these ATGs or NBR1 genes resulted in a decreased accumulation of several functional proteins and an increased accumulation of ubiquitinated proteins, subsequently compromising BR-induced cold tolerance. These results strongly suggest that BRs regulate NBR1-dependent selective autophagy in a BZR1-dependent manner in response to chilling stress in tomato.

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Claims 10

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BRs induced autophagy and NBR1 accumulation under chilling stress.

Treatment
BRse0
Gene
NBR1e0
Outcome
autophagy and accumulation of the selective autophagy receptor NBR1e0
Direction
inducee0
Qualifier
under chilling stresse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“BRs and their signaling element BZR1 can induce autophagy and accumulation of the selective autophagy receptor NBR1 in tomato under chilling stress”

✓ located verbatim in the source · abstract, characters 526–673 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BZR1 induced autophagy and NBR1 accumulation under chilling stress.

Treatment
BZR1e0
Gene
NBR1e0
Outcome
autophagy and accumulation of the selective autophagy receptor NBR1e0
Direction
inducee0
Qualifier
under chilling stresse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“BRs and their signaling element BZR1 can induce autophagy and accumulation of the selective autophagy receptor NBR1 in tomato under chilling stress”

✓ located verbatim in the source · abstract, characters 526–673 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Cold increased BZR1 stability.

Treatment
Colde0
Gene
BZR1e0
Outcome
stability of BZR1e0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Cold increased the stability of BZR1, which was promoted by BRs”

✓ located verbatim in the source · abstract, characters 675–738 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 117–123 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BRs promoted cold-induced BZR1 stability.

Treatment
BRse0
Gene
BZR1e0
Outcome
stability of BZR1e0
Direction
promotede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Cold increased the stability of BZR1, which was promoted by BRs”

✓ located verbatim in the source · abstract, characters 675–738 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 117–123 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

Increased BZR1 stability activated transcription of ATGs and NBR1 genes through promoter binding, resulting in selective autophagy.

Gene
BZR1e0
Outcome
transcription of several autophagy-related genes (ATGs) and NBR1 genese0
Direction
activatede0
Qualifier
by directly binding to their promoterse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Cold- and BR-induced increased BZR1 stability activated the transcription of several autophagy-related genes (ATGs) and NBR1 genes by directly binding to their promoters, which resulted in selective autophagy”

✓ located verbatim in the source · abstract, characters 740–948 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 117–123 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing ATGs decreased accumulation of functional proteins.

Treatment
silencing of these ATGse0
Gene
ATGse0
Outcome
accumulation of several functional proteinse0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“silencing of these ATGs or NBR1 genes resulted in a decreased accumulation of several functional proteins”

✓ located verbatim in the source · abstract, characters 963–1068 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 117–123 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing NBR1 genes decreased accumulation of functional proteins.

Treatment
silencing of these ATGs or NBR1 genese0
Gene
NBR1 genese0
Outcome
accumulation of several functional proteinse0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“silencing of these ATGs or NBR1 genes resulted in a decreased accumulation of several functional proteins”

✓ located verbatim in the source · abstract, characters 963–1068 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 117–123 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing ATGs or NBR1 genes increased accumulation of ubiquitinated proteins.

Treatment
silencing of these ATGs or NBR1 genese0
Outcome
accumulation of ubiquitinated proteinse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“silencing of these ATGs or NBR1 genes resulted in a decreased accumulation of several functional proteins and an increased accumulation of ubiquitinated proteins”

✓ located verbatim in the source · abstract, characters 963–1124 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 117–123 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing ATGs or NBR1 genes compromised BR-induced cold tolerance.

Treatment
silencing of these ATGs or NBR1 genese0
Outcome
BR-induced cold tolerancee0
Direction
compromisinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“silencing of these ATGs or NBR1 genes resulted in a decreased accumulation of several functional proteins and an increased accumulation of ubiquitinated proteins, subsequently compromising BR-induced cold tolerance”

✓ located verbatim in the source · abstract, characters 963–1177 · show in text ↑
t0

“tomato”

✓ located verbatim in the source · title, characters 117–123 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors inferred BR regulation of NBR1-dependent selective autophagy through BZR1 under chilling stress.

Gene
BZR1e0
Outcome
NBR1-dependent selective autophagye0
Qualifier
in response to chilling stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“BRs regulate NBR1-dependent selective autophagy in a BZR1-dependent manner in response to chilling stress in tomato”

✓ located verbatim in the source · abstract, characters 1215–1330 · show in text ↑

class · molecular: metabolites · Solanum lycopersicum (tomato)Positive and negative results

15 papers: 8 positive, 7 negative or no effect

7 papers in the same direction as this paper · 7 in the opposite direction

  1. negative
  2. negative
  3. no effect

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loss of function · tolerance: abiotic · Solanum lycopersicum (tomato)Positive and negative results

53 papers: 12 positive, 41 negative or no effect

40 papers in the same direction as this paper · 12 in the opposite direction

  1. negative
  2. negative
  3. negative

49 papers more in this group

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loss of function · molecular: metabolites · Solanum lycopersicum (tomato)Positive and negative results

67 papers: 18 positive, 49 negative or no effect

48 papers in the same direction as this paper · 18 in the opposite direction

  1. negative
  2. positive
  3. positive

63 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.