Paper · 2017 · Saudi Journal of Biological Sciences

Efficient and reproducible in vitro regeneration of Solanum lycopersicum and assessment genetic uniformity using flow cytometry and SPAR methods

Abdulrahman A. Alatar; Mohammad Faisal; Eslam M. Abdel-Salam; et al.

10
claims
19
verbatim quotes
31
citations
5
research areas
✓
Open access · cc-by-nc-nd

Abstract

In the present study, we develop an efficient and reproducible in vitro regeneration system for two cultivars viz., Jamila and Tomaland of Solanum lycopersicum L., an economically important vegetable crop throughout the world. Sterilization of seeds with 2.5% (v/v) NaOCl was found to be most effective, about 97% of seeds germinated on cotton in magenta box moistened with sterile half strength (½)Murashige and Skoog (MS) medium. Regeneration efficiency of cotyledonary leaf (CL) and cotyledonary node (CN) explants derived from 08 days old aseptic seedling were assessed on MS medium supplemented with different concentrations of auxins and cytokinin. CL explants were found more responsive in comparison to CN in both the cultivars. Types of basal media were also assessed and found to have a significant effect on shoot regeneration. Highest regeneration frequency and maximum number of shoots were standardized from CL explants on MS medium supplied with 6-benzyl adenine (BA; 5.0 µM), indole-3-butyric acid (IBA; 2.5 µM) and Kinetin (Kin; 10.0 µM). In vitro regenerated microshoots were rooted on ½MS medium containing 0.5 µM indole-3-butyric acid (IBA). Regenerated plantlets with well-developed roots and shoot system were successfully acclimated to ex vitro condition. Genetic uniformity of tissue culture raised plantlets was first time evaluated using flow cytometry and single primer amplification reaction (SPAR) methods viz., DAMD and ISSR. No significant changes in ploidy level and nuclear DNA content profile were observed between in vitro propagated plants and normal plants of both the cultivars. Similarly, the SPAR analysis also revealed monomorphic banding patterns in regenerated plantlets of S. lycopersicum verifying their genetic uniformity and clonal fidelity. This efficient regeneration system can be used as a fast and reproducible method for genetic transformation of this important vegetable crop.

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The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

NaOCl sterilization gave about 97% seed germination.

Taxon
Solanum lycopersicum L.Solanum lycopersicume1
Organ / stage
seedse0
Treatment
2.5% (v/v) NaOCle0
Outcome
seeds germinatede0
Direction
most effectivee0
Value
97%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Sterilization of seeds with 2.5% (v/v) NaOCl was found to be most effective, about 97% of seeds germinated on cotton in magenta box moistened with sterile half strength (½)Murashige and Skoog (MS) medium.”

✓ located verbatim in the source · abstract, characters 227–431 · show in text ↑
e1

“Solanum lycopersicum L.”

✓ located verbatim in the source · abstract, characters 139–162 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Cotyledonary leaf explants were more responsive than cotyledonary nodes in both cultivars.

Taxon
Solanum lycopersicumSolanum lycopersicumt0
Material
CL explantse0
Outcome
more responsivee0
Direction
more responsivee0
Comparator
CNe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“CL explants were found more responsive in comparison to CN in both the cultivars.”

✓ located verbatim in the source · abstract, characters 655–736 · show in text ↑
t0

“Solanum lycopersicum”

✓ located verbatim in the source · title, characters 52–72 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Basal media significantly affected shoot regeneration.

Taxon
Solanum lycopersicumSolanum lycopersicumt0
Treatment
Types of basal mediae0
Outcome
shoot regeneratione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Types of basal media were also assessed and found to have a significant effect on shoot regeneration.”

✓ located verbatim in the source · abstract, characters 737–838 · show in text ↑
t0

“Solanum lycopersicum”

✓ located verbatim in the source · title, characters 52–72 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The specified BA, IBA and Kin medium gave the highest regeneration frequency.

Taxon
Solanum lycopersicumSolanum lycopersicumt0
Organ / stage
CL explantse0
Treatment
MS medium supplied with 6-benzyl adenine (BA; 5.0 µM), indole-3-butyric acid (IBA; 2.5 µM) and Kinetin (Kin; 10.0 µM)e0
Outcome
regeneration frequencye0
Direction
Higheste0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Highest regeneration frequency and maximum number of shoots were standardized from CL explants on MS medium supplied with 6-benzyl adenine (BA; 5.0 µM), indole-3-butyric acid (IBA; 2.5 µM) and Kinetin (Kin; 10.0 µM).”

✓ located verbatim in the source · abstract, characters 839–1055 · show in text ↑
t0

“Solanum lycopersicum”

✓ located verbatim in the source · title, characters 52–72 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The specified BA, IBA and Kin medium gave the maximum number of shoots.

Taxon
Solanum lycopersicumSolanum lycopersicumt0
Organ / stage
CL explantse0
Treatment
MS medium supplied with 6-benzyl adenine (BA; 5.0 µM), indole-3-butyric acid (IBA; 2.5 µM) and Kinetin (Kin; 10.0 µM)e0
Outcome
number of shootse0
Direction
maximume0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Highest regeneration frequency and maximum number of shoots were standardized from CL explants on MS medium supplied with 6-benzyl adenine (BA; 5.0 µM), indole-3-butyric acid (IBA; 2.5 µM) and Kinetin (Kin; 10.0 µM).”

✓ located verbatim in the source · abstract, characters 839–1055 · show in text ↑
t0

“Solanum lycopersicum”

✓ located verbatim in the source · title, characters 52–72 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Regenerated microshoots rooted on half-strength MS with IBA.

Taxon
Solanum lycopersicumSolanum lycopersicumt0
Organ / stage
microshootse0
Treatment
½MS medium containing 0.5 µM indole-3-butyric acid (IBA)e0
Outcome
microshoots were rootede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“In vitro regenerated microshoots were rooted on ½MS medium containing 0.5 µM indole-3-butyric acid (IBA).”

✓ located verbatim in the source · abstract, characters 1056–1161 · show in text ↑
t0

“Solanum lycopersicum”

✓ located verbatim in the source · title, characters 52–72 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Regenerated plantlets acclimated successfully ex vitro.

Taxon
Solanum lycopersicumSolanum lycopersicumt0
Organ / stage
plantletse0
Outcome
successfully acclimatede0
Setting
ex vitro conditione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Regenerated plantlets with well-developed roots and shoot system were successfully acclimated to ex vitro condition.”

✓ located verbatim in the source · abstract, characters 1162–1278 · show in text ↑
t0

“Solanum lycopersicum”

✓ located verbatim in the source · title, characters 52–72 · show in text ↑
Observationobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Regenerated plants showed no significant ploidy change versus normal plants.

Taxon
Solanum lycopersicumSolanum lycopersicumt0
Outcome
ploidy levele0
Direction
No significant changese0
Comparator
normal plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“No significant changes in ploidy level and nuclear DNA content profile were observed between in vitro propagated plants and normal plants of both the cultivars.”

✓ located verbatim in the source · abstract, characters 1456–1616 · show in text ↑
t0

“Solanum lycopersicum”

✓ located verbatim in the source · title, characters 52–72 · show in text ↑
Observationobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Regenerated plants showed no significant nuclear DNA content change versus normal plants.

Taxon
Solanum lycopersicumSolanum lycopersicumt0
Outcome
nuclear DNA content profilee0
Direction
No significant changese0
Comparator
normal plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“No significant changes in ploidy level and nuclear DNA content profile were observed between in vitro propagated plants and normal plants of both the cultivars.”

✓ located verbatim in the source · abstract, characters 1456–1616 · show in text ↑
t0

“Solanum lycopersicum”

✓ located verbatim in the source · title, characters 52–72 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

SPAR showed monomorphic patterns in regenerated plantlets.

Taxon
S. lycopersicumSolanum lycopersicume0
Outcome
monomorphic banding patternse0
Qualifier
genetic uniformity and clonal fidelitye0

Not reportedComparatorValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the SPAR analysis also revealed monomorphic banding patterns in regenerated plantlets of S. lycopersicum verifying their genetic uniformity and clonal fidelity.”

✓ located verbatim in the source · abstract, characters 1628–1788 · show in text ↑

N-benzyladenine · growth · Solanum lycopersicum (tomato)Results differ

42 papers: 35 positive, 7 negative or no effect

34 papers in the same direction as this paper · 7 in the opposite direction

  1. positive
  2. negative
  3. negative

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sodium hypochlorite · growth · Solanum lycopersicum (tomato)Positive and negative results

4 papers: 2 positive, 2 negative or no effect

1 paper in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. negative
  3. positive
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indole-3-butyric acid · growth · Solanum lycopersicum (tomato)Positive and negative results

10 papers: 8 positive, 2 negative or no effect

7 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. negative
  3. positive

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kinetin · growth · Solanum lycopersicum (tomato)Positive and negative results

24 papers: 22 positive, 2 negative or no effect

21 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. no effect
  3. positive

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adenine · growth · Solanum lycopersicum (tomato)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
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in vitro · growth · Solanum lycopersicum (tomato)Positive and negative results

123 papers: 93 positive, 30 negative or no effect

92 papers in the same direction as this paper · 25 in the opposite direction · 5 reporting no difference from an alternative

  1. no effect
  2. no effect
  3. no effect

119 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.