Paper · 2006 · Journal of Experimental Botany

Two new cysteine proteinases with specific expression patterns in mature and senescent tobacco (Nicotiana tabacum L.) leaves*

Getu Beyene; Christine H. Foyer; Karl J. Kunert

11
claims
24
verbatim quotes
89
citations
3
research areas
✓
Open access

Abstract

Cysteine proteinases are involved in various physiological and developmental processes in plants. Two cDNAs from senescent and non-senescent tobacco leaves were isolated with degenerate primers designed from conserved regions of plant senescence-associated cysteine proteinases using rapid amplification of cDNA ends (RACE). Both sequences encode papain-like cysteine proteinases: the 833 bp fragment (NtCP1) encoding a C-terminus partial sequence of a putative tobacco cysteine proteinase gene whereas the 1300 bp fragment (NtCP2) is a full-length cysteine proteinase. On the amino acid sequence level, NtCP1 has a high similarity with other senescence-associated cysteine proteinases. It is expressed only in senescent leaves. It is not induced in mature green leaves upon exposure to drought or heat. These results suggest that it might be a good developmental senescence marker in tobacco. By contrast, NtCP2 has a high similarity to KDEL-tailed cysteine proteinases and is expressed in mature green leaves. Both drought and heat decreased NtCP2 transcript abundance in mature green leaves. It is concluded that NtCP1 is a senescence-specific cysteine proteinase whereas NtCP2 fulfils roles in green leaves that might be similar to those of KDEL-tailed cysteine proteinases involved, for example, in programmed cell death.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

NtCP1 is a partial putative tobacco cysteine proteinase sequence of 833 bp.

Gene
NtCP1e0
Outcome
C-terminus partial sequencee0
Value
833 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“the 833 bp fragment (NtCP1) encoding a C-terminus partial sequence of a putative tobacco cysteine proteinase gene”

✓ located verbatim in the source · abstract, characters 381–494 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

NtCP2 is a full-length cysteine proteinase sequence of 1300 bp.

Gene
NtCP2e0
Outcome
full-length cysteine proteinasee0
Value
1300 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“the 1300 bp fragment (NtCP2) is a full-length cysteine proteinase”

✓ located verbatim in the source · abstract, characters 503–568 · show in text ↑
t0

“tobacco (Nicotiana tabacum L.)”

✓ located verbatim in the source · title, characters 87–117 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

NtCP1 has high amino acid similarity to other senescence-associated cysteine proteinases.

Gene
NtCP1e0
Outcome
high similarity with other senescence-associated cysteine proteinasese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“NtCP1 has a high similarity with other senescence-associated cysteine proteinases”

✓ located verbatim in the source · abstract, characters 604–685 · show in text ↑
t0

“tobacco (Nicotiana tabacum L.)”

✓ located verbatim in the source · title, characters 87–117 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

NtCP1 is expressed only in senescent tobacco leaves.

Organ / stage
senescent leavese0
Gene
NtCP1e1
Outcome
expressed only in senescent leavese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“It is expressed only in senescent leaves”

✓ located verbatim in the source · abstract, characters 687–727 · show in text ↑
e1

“NtCP1 has a high similarity with other senescence-associated cysteine proteinases”

✓ located verbatim in the source · abstract, characters 604–685 · show in text ↑
t0

“tobacco (Nicotiana tabacum L.)”

✓ located verbatim in the source · title, characters 87–117 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Drought did not induce NtCP1 in mature green tobacco leaves.

Organ / stage
mature green leavese0
Treatment
droughte0
Gene
NtCP1e1
Outcome
inducede0
Direction
not inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“It is not induced in mature green leaves upon exposure to drought or heat”

✓ located verbatim in the source · abstract, characters 729–802 · show in text ↑
e1

“NtCP1 has a high similarity with other senescence-associated cysteine proteinases”

✓ located verbatim in the source · abstract, characters 604–685 · show in text ↑
t0

“tobacco (Nicotiana tabacum L.)”

✓ located verbatim in the source · title, characters 87–117 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Heat did not induce NtCP1 in mature green tobacco leaves.

Organ / stage
mature green leavese0
Treatment
heate0
Gene
NtCP1e1
Outcome
inducede0
Direction
not inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“It is not induced in mature green leaves upon exposure to drought or heat”

✓ located verbatim in the source · abstract, characters 729–802 · show in text ↑
e1

“NtCP1 has a high similarity with other senescence-associated cysteine proteinases”

✓ located verbatim in the source · abstract, characters 604–685 · show in text ↑
t0

“tobacco (Nicotiana tabacum L.)”

✓ located verbatim in the source · title, characters 87–117 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

NtCP1 may be a developmental senescence marker in tobacco.

Gene
NtCP1e1
Outcome
developmental senescence markere0
Qualifier
mighte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“it might be a good developmental senescence marker in tobacco”

✓ located verbatim in the source · abstract, characters 831–892 · show in text ↑
e1

“NtCP1 has a high similarity with other senescence-associated cysteine proteinases”

✓ located verbatim in the source · abstract, characters 604–685 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

NtCP2 is similar to KDEL-tailed cysteine proteinases and is expressed in mature green tobacco leaves.

Organ / stage
mature green leavese0
Gene
NtCP2e0
Outcome
high similarity to KDEL-tailed cysteine proteinases and is expressed in mature green leavese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“NtCP2 has a high similarity to KDEL-tailed cysteine proteinases and is expressed in mature green leaves”

✓ located verbatim in the source · abstract, characters 907–1010 · show in text ↑
t0

“tobacco (Nicotiana tabacum L.)”

✓ located verbatim in the source · title, characters 87–117 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Drought decreased NtCP2 transcript abundance in mature green tobacco leaves.

Organ / stage
mature green leavese0
Treatment
droughte0
Gene
NtCP2e0
Outcome
NtCP2 transcript abundancee0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Both drought and heat decreased NtCP2 transcript abundance in mature green leaves”

✓ located verbatim in the source · abstract, characters 1012–1093 · show in text ↑
t0

“tobacco (Nicotiana tabacum L.)”

✓ located verbatim in the source · title, characters 87–117 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Heat decreased NtCP2 transcript abundance in mature green tobacco leaves.

Organ / stage
mature green leavese0
Treatment
heate0
Gene
NtCP2e0
Outcome
NtCP2 transcript abundancee0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Both drought and heat decreased NtCP2 transcript abundance in mature green leaves”

✓ located verbatim in the source · abstract, characters 1012–1093 · show in text ↑
t0

“tobacco (Nicotiana tabacum L.)”

✓ located verbatim in the source · title, characters 87–117 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors infer that NtCP2 may have roles in green leaves similar to KDEL-tailed cysteine proteinases involved in programmed cell death.

Gene
NtCP2e0
Outcome
roles in green leavese0
Qualifier
might be similar to those of KDEL-tailed cysteine proteinases involved, for example, in programmed cell deathe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“NtCP2 fulfils roles in green leaves that might be similar to those of KDEL-tailed cysteine proteinases involved, for example, in programmed cell death”

✓ located verbatim in the source · abstract, characters 1175–1325 · show in text ↑
t0

“tobacco (Nicotiana tabacum L.)”

✓ located verbatim in the source · title, characters 87–117 · show in text ↑

heat · molecular: expression · Nicotiana tabacum (tobacco)Positive and negative results

9 papers: 5 positive, 4 negative or no effect

3 papers in the same direction as this paper · 5 in the opposite direction

  1. positive
  2. positive
  3. positive

5 papers more in this group

See all 9 papers →

drought · molecular: expression · Nicotiana tabacum (tobacco)Positive and negative results

16 papers: 9 positive, 7 negative or no effect

6 papers in the same direction as this paper · 9 in the opposite direction

  1. positive
  2. positive
  3. positive

12 papers more in this group

See all 16 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.