Paper · 2004 · The Plant Journal

Biological functions of ent‐ and syn‐copalyl diphosphate synthases in rice: key enzymes for the branch point of gibberellin and phytoalexin biosynthesis

Kazuko Otomo; Hiromichi Kenmoku; Hideaki Oikawa; et al.

8
claims
12
verbatim quotes
185
citations
2
research areas
—
Not open access

Abstract

Rice (Oryza sativa L.) produces ent-copalyl diphosphate (ent-CDP) and syn-CDP as precursors for several classes of phytoalexins and the phytohormones, gibberellins (GAs). It has recently been shown that a loss-of-function mutation of OsCPS1, a gene encoding a putative ent-CDP synthase, results in a severely GA-deficient dwarf phenotype in rice. To clarify the biological functions of the ent- and syn-CDP synthases involved in the biosynthesis of phytoalexins and/or GAs, we isolated two cDNAs, OsCyc1 and OsCyc2, encoding putative diterpene cyclases from ultraviolet (UV)-irradiated rice leaves (cv. Nipponbare). The production of phytoalexins in rice leaves is known to be highly induced by UV treatment. Using a bacterial expression system, we demonstrated that OsCyc1 encodes syn-CDP synthase and that OsCyc2 and OsCPS1 encode ent-CDP synthase. The level of expression of the OsCyc1 and OsCyc2 transcripts in rice leaves increased drastically in response to UV treatment, whereas expression of the OsCPS1 transcript was not induced by UV light. These results suggest that OsCyc1, OsCyc2 and OsCPS1 are responsible for the biosynthesis of momilactones A and B and oryzalexin S, oryzalexins A-F and phytocassanes A-E, and GAs, respectively. Our results strongly suggest the presence of two ent-CDP synthase isoforms in rice, one that participates in the biosynthesis of GAs and a second that is involved in the biosynthesis of phytoalexins.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

OsCyc1 encodes syn-CDP synthase in rice, as demonstrated using a bacterial expression system.

Gene
OsCyc1e0
Outcome
encodes syn-CDP synthasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 70–74 · show in text ↑
e0

“OsCyc1 encodes syn-CDP synthase”

✓ located verbatim in the source · abstract, characters 767–798 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsCyc2 and OsCPS1 encode ent-CDP synthase in rice, as demonstrated using a bacterial expression system.

Gene
OsCyc2 and OsCPS1e0
Outcome
encode ent-CDP synthasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 70–74 · show in text ↑
e0

“OsCyc2 and OsCPS1 encode ent-CDP synthase”

✓ located verbatim in the source · abstract, characters 808–849 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Two cDNAs, OsCyc1 and OsCyc2, encoding putative diterpene cyclases were isolated from UV-irradiated rice leaves of cv. Nipponbare.

Material
Nipponbaree0
Organ / stage
rice leavese0
Treatment
ultraviolet (UV)-irradiatede0
Gene
OsCyc1 and OsCyc2e0
Outcome
encoding putative diterpene cyclasese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“we isolated two cDNAs, OsCyc1 and OsCyc2, encoding putative diterpene cyclases from ultraviolet (UV)-irradiated rice leaves (cv. Nipponbare)”

✓ located verbatim in the source · abstract, characters 474–614 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Expression of the OsCyc1 and OsCyc2 transcripts in rice leaves increased drastically in response to UV treatment.

Organ / stage
rice leavese0
Treatment
UV treatmente0
Gene
OsCyc1 and OsCyc2e0
Outcome
level of expression of the OsCyc1 and OsCyc2 transcriptse0
Direction
increased drasticallye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The level of expression of the OsCyc1 and OsCyc2 transcripts in rice leaves increased drastically in response to UV treatment”

✓ located verbatim in the source · abstract, characters 851–976 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Expression of the OsCPS1 transcript was not induced by UV light.

Treatment
UV lighte0
Gene
OsCPS1e0
Outcome
expression of the OsCPS1 transcripte0
Direction
not inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 70–74 · show in text ↑
e0

“expression of the OsCPS1 transcript was not induced by UV light”

✓ located verbatim in the source · abstract, characters 986–1049 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors suggest OsCyc1, OsCyc2 and OsCPS1 are responsible for the biosynthesis of momilactones and oryzalexin S, oryzalexins and phytocassanes, and GAs, respectively.

Gene
OsCyc1, OsCyc2 and OsCPS1e0
Outcome
biosynthesis of momilactones A and B and oryzalexin S, oryzalexins A-F and phytocassanes A-E, and GAse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 70–74 · show in text ↑
e0

“OsCyc1, OsCyc2 and OsCPS1 are responsible for the biosynthesis of momilactones A and B and oryzalexin S, oryzalexins A-F and phytocassanes A-E, and GAs”

✓ located verbatim in the source · abstract, characters 1078–1229 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors strongly suggest two ent-CDP synthase isoforms exist in rice, one in GA biosynthesis and a second in phytoalexin biosynthesis.

Outcome
presence of two ent-CDP synthase isoformse0
Qualifier
one that participates in the biosynthesis of GAs and a second that is involved in the biosynthesis of phytoalexinse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the presence of two ent-CDP synthase isoforms in rice, one that participates in the biosynthesis of GAs and a second that is involved in the biosynthesis of phytoalexins”

✓ located verbatim in the source · abstract, characters 1274–1443 · show in text ↑
Observationobservedcited backgroundmeasured

Claim · model-written summary

A loss-of-function mutation of OsCPS1 was previously shown to give a severely GA-deficient dwarf phenotype in rice.

Gene
OsCPS1e0
Outcome
severely GA-deficient dwarf phenotypee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“a loss-of-function mutation of OsCPS1, a gene encoding a putative ent-CDP synthase, results in a severely GA-deficient dwarf phenotype in rice”

✓ located verbatim in the source · abstract, characters 203–345 · show in text ↑

uv · molecular: expression · Oryza sativa (rice)Positive and negative results

10 papers: 7 positive, 3 negative or no effect

2 papers in the same direction as this paper · 7 in the opposite direction

  1. positive
  2. positive
  3. positive

6 papers more in this group

See all 10 papers →

light · molecular: expression · Oryza sativa (rice)Positive and negative results

32 papers: 20 positive, 12 negative or no effect

11 papers in the same direction as this paper · 20 in the opposite direction

  1. positive
  2. positive
  3. positive

28 papers more in this group

See all 32 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.