Paper · 2013 · PLoS ONE

Arabidopsis Clade I TGA Factors Regulate Apoplastic Defences against the Bacterial Pathogen Pseudomonas syringae through Endoplasmic Reticulum-Based Processes

Lipu Wang; Pierre R. Fobert

7
claims
21
verbatim quotes
44
citations
3
research areas
✓
Open access · cc-by

Abstract

During the plant immune response, large-scale transcriptional reprogramming is modulated by numerous transcription (co) factors. The Arabidopsis basic leucine zipper transcription factors TGA1 and TGA4, which comprise the clade I TGA factors, have been shown to positively contribute to disease resistance against virulent strains of the bacterial pathogen Pseudomonas syringae. Despite physically interacting with the key immune regulator, NON-EXPRESSOR OF PATHOGENESIS-RELATED GENES 1 (NPR1), following elicitation with salicylic acid (SA), clade I function was shown to be largely independent of NPR1. Unlike mutants in NPR1, tga1-1 tga4-1 plants do not display reductions in steady-state levels of SA-pathway marker genes following treatment with this phenolic signaling metabolite or after challenge with virulent or avirulent P. syringae. By exploiting bacterial strains that have limited capacity to suppress Arabidopsis defence responses, the present study demonstrates that tga1-1 tga4-1 plants are compromised in basal resistance and defective in several apoplastic defence responses, including the oxidative burst of reactive oxygen species, callose deposition, as well as total and apoplastic PATHOGENESIS-RELATED 1 (PR-1) protein accumulation. Furthermore, analysis of npr1-1 and the tga1-1 tga4-1 npr1-1 triple mutant indicates that clade I TGA factors act substantially independent of NPR1 in mediating disease resistance against these strains of P. syringae. Increased sensitivity to the N-glycosylation inhibitor tunicamycin and elevated levels of endoplasmic reticulum (ER) stress marker genes encoding ER-resident chaperones in mutant seedlings suggest that loss of apoplastic defence responses is associated with aberrant protein secretion and implicate clade I TGA factors as positive regulators of one or more ER-related secretion pathways.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 7

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

tga1-1 tga4-1 mutant plants were compromised in basal resistance to bacterial strains with limited capacity to suppress defence responses.

Taxon
ArabidopsisArabidopsise0
Material
tga1-1 tga4-1e1
Treatment
bacterial strains that have limited capacity to suppress Arabidopsis defence responsese2
Interactor
Pseudomonas syringaePseudomonas syringaee3pathogen
Outcome
basal resistancee1
Direction
compromisede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas syringae
Pseudomonas syringae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The Arabidopsis basic leucine zipper transcription factors”

✓ located verbatim in the source · abstract, characters 129–187 · show in text ↑
e1

“tga1-1 tga4-1 plants are compromised in basal resistance”

✓ located verbatim in the source · abstract, characters 983–1039 · show in text ↑
e2

“By exploiting bacterial strains that have limited capacity to suppress Arabidopsis defence responses”

✓ located verbatim in the source · abstract, characters 845–945 · show in text ↑
e3

“virulent strains of the bacterial pathogen Pseudomonas syringae”

✓ located verbatim in the source · abstract, characters 314–377 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

tga1-1 tga4-1 mutant plants were defective in apoplastic defence responses: oxidative burst, callose deposition and PR-1 protein accumulation.

Taxon
ArabidopsisArabidopsise0
Material
tga1-1 tga4-1e4
Treatment
bacterial strains that have limited capacity to suppress Arabidopsis defence responsese2
Interactor
Pseudomonas syringaePseudomonas syringaee3pathogen
Outcome
apoplastic defence responsese1
Direction
defectivee1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas syringae
Pseudomonas syringae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The Arabidopsis basic leucine zipper transcription factors”

✓ located verbatim in the source · abstract, characters 129–187 · show in text ↑
e1

“defective in several apoplastic defence responses, including the oxidative burst of reactive oxygen species, callose deposition, as well as total and apoplastic PATHOGENESIS-RELATED 1 (PR-1) protein accumulation”

✓ located verbatim in the source · abstract, characters 1044–1255 · show in text ↑
e2

“By exploiting bacterial strains that have limited capacity to suppress Arabidopsis defence responses”

✓ located verbatim in the source · abstract, characters 845–945 · show in text ↑
e3

“virulent strains of the bacterial pathogen Pseudomonas syringae”

✓ located verbatim in the source · abstract, characters 314–377 · show in text ↑
e4

“tga1-1 tga4-1 plants are compromised in basal resistance”

✓ located verbatim in the source · abstract, characters 983–1039 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Clade I TGA factors act substantially independent of NPR1 in mediating disease resistance against P. syringae strains.

Taxon
ArabidopsisArabidopsise0
Material
npr1-1e1
Interactor
P. syringaePseudomonas syringaee1pathogen
Outcome
disease resistancee1
Qualifier
substantially independent of NPR1e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas syringae
Pseudomonas syringae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The Arabidopsis basic leucine zipper transcription factors”

✓ located verbatim in the source · abstract, characters 129–187 · show in text ↑
e1

“analysis of npr1-1 and the tga1-1 tga4-1 npr1-1 triple mutant indicates that clade I TGA factors act substantially independent of NPR1 in mediating disease resistance against these strains of P. syringae”

✓ located verbatim in the source · abstract, characters 1270–1473 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

tga1-1 tga4-1 mutant seedlings showed elevated levels of ER stress marker genes encoding ER-resident chaperones.

Taxon
ArabidopsisArabidopsise0
Treatment
mutant seedlingse1
Gene
ER-resident chaperonese1
Outcome
levels of endoplasmic reticulum (ER) stress marker genese1
Direction
elevatede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The Arabidopsis basic leucine zipper transcription factors”

✓ located verbatim in the source · abstract, characters 129–187 · show in text ↑
e1

“elevated levels of endoplasmic reticulum (ER) stress marker genes encoding ER-resident chaperones in mutant seedlings”

✓ located verbatim in the source · abstract, characters 1546–1663 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

tga1-1 tga4-1 mutant seedlings were more sensitive to the N-glycosylation inhibitor tunicamycin.

Taxon
ArabidopsisArabidopsise0
Treatment
N-glycosylation inhibitor tunicamycine1
Outcome
sensitivitye1
Direction
Increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The Arabidopsis basic leucine zipper transcription factors”

✓ located verbatim in the source · abstract, characters 129–187 · show in text ↑
e1

“Increased sensitivity to the N-glycosylation inhibitor tunicamycin and elevated levels of endoplasmic reticulum (ER) stress marker genes encoding ER-resident chaperones in mutant seedlings”

✓ located verbatim in the source · abstract, characters 1475–1663 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

tga1-1 tga4-1 plants do not show reductions in steady-state levels of SA-pathway marker genes after salicylic acid treatment.

Taxon
ArabidopsisArabidopsise0
Material
tga1-1 tga4-1e1
Treatment
salicylic acid (SA)e2
Outcome
steady-state levels of SA-pathway marker genese1
Direction
do not display reductionse1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The Arabidopsis basic leucine zipper transcription factors”

✓ located verbatim in the source · abstract, characters 129–187 · show in text ↑
e1

“tga1-1 tga4-1 plants do not display reductions in steady-state levels of SA-pathway marker genes following treatment with this phenolic signaling metabolite”

✓ located verbatim in the source · abstract, characters 629–785 · show in text ↑
e2

“following elicitation with salicylic acid (SA)”

✓ located verbatim in the source · abstract, characters 495–541 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

tga1-1 tga4-1 plants do not show reductions in steady-state levels of SA-pathway marker genes after challenge with P. syringae.

Taxon
ArabidopsisArabidopsise0
Material
tga1-1 tga4-1e1
Treatment
virulent or avirulent P. syringaee2
Interactor
P. syringaePseudomonas syringaee2pathogen
Outcome
steady-state levels of SA-pathway marker genese1
Direction
do not display reductionse1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas syringae
Pseudomonas syringae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The Arabidopsis basic leucine zipper transcription factors”

✓ located verbatim in the source · abstract, characters 129–187 · show in text ↑
e1

“tga1-1 tga4-1 plants do not display reductions in steady-state levels of SA-pathway marker genes following treatment with this phenolic signaling metabolite or after challenge with virulent or avirulent P. syringae”

✓ located verbatim in the source · abstract, characters 629–843 · show in text ↑
e2

“virulent or avirulent P. syringae”

✓ located verbatim in the source · abstract, characters 810–843 · show in text ↑

Pseudomonas syringae · molecular: expression · ArabidopsisPositive and negative results

10 papers: 6 positive, 4 negative or no effect

3 papers in the same direction as this paper · 6 in the opposite direction

  1. negative
  2. positive
  3. positive

6 papers more in this group

See all 10 papers →

salicylic acid · molecular: expression · ArabidopsisPositive and negative results

41 papers: 26 positive, 15 negative or no effect

14 papers in the same direction as this paper · 26 in the opposite direction

  1. positive
  2. positive
  3. positive

37 papers more in this group

See all 41 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.