Paper · 2025 · Plant Biotechnology

Citrate pretreatment promotes rice (Oryza sativa L.) coleoptile elongation under submergence

Akio Kubo; Miho Sanagi; Yuko Maki; et al.

6
claims
13
verbatim quotes
0
citations
2
research areas
✓
Open access · cc-by

Abstract

L.) possesses various adaptive mechanisms including energy production from seed storage starch via anaerobic respiration and coleoptile elongation during early post-germinative growth. However, further investigation of the submergence tolerance mechanism is important for understanding its effect on plant physiology and agricultural production. Here, we found that pretreatment of rice seeds with organic acids, such as citrate and lactate, improved subsequent seedling growth under submergence. Citrate pretreatment promoted coleoptile elongation under submergence. Moreover, the expression of genes related to anaerobic respiration and phenylpropanoid biosynthesis was activated in the embryo of citrate treated seeds during submergence while the expression of genes encoding starch degradation enzymes and signaling factors was not significantly influenced. Accordingly, starch and soluble sugar amounts in the endosperm were not altered by citrate pretreatment. These results suggest that citrate pretreatment promotes coleoptile elongation in rice seeds under submergence via the transcriptional regulation of genes related to anaerobic energy production, possibly through an unknown mechanism related to phenylpropanoid metabolism.

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Claims 6

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Pretreatment of rice seeds with organic acids such as citrate and lactate improved seedling growth under submergence.

Treatment
pretreatment of rice seeds with organic acidse1
Outcome
seedling growthe1
Direction
improvede1
Qualifier
under submergencee1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Citrate pretreatment promotes rice (Oryza sativa L.) coleoptile elongation under submergence”

✓ located verbatim in the source · title, characters 0–92 · show in text ↑
e1

“pretreatment of rice seeds with organic acids, such as citrate and lactate, improved subsequent seedling growth under submergence”

✓ located verbatim in the source · abstract, characters 366–495 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Citrate pretreatment promoted coleoptile elongation of rice under submergence.

Treatment
Citrate pretreatmente2
Outcome
coleoptile elongatione2
Direction
promotede2
Qualifier
under submergencee2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Citrate pretreatment promotes rice (Oryza sativa L.) coleoptile elongation under submergence”

✓ located verbatim in the source · title, characters 0–92 · show in text ↑
e2

“Citrate pretreatment promoted coleoptile elongation under submergence”

✓ located verbatim in the source · abstract, characters 497–566 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Citrate treatment activated the expression of genes for anaerobic respiration and phenylpropanoid biosynthesis in the rice embryo during submergence.

Organ / stage
embryoe3
Treatment
citratee3
Gene
genes related to anaerobic respiration and phenylpropanoid biosynthesise3
Outcome
expressione3
Direction
activatede3
Qualifier
during submergencee3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Citrate pretreatment promotes rice (Oryza sativa L.) coleoptile elongation under submergence”

✓ located verbatim in the source · title, characters 0–92 · show in text ↑
e3

“the expression of genes related to anaerobic respiration and phenylpropanoid biosynthesis was activated in the embryo of citrate treated seeds during submergence”

✓ located verbatim in the source · abstract, characters 578–739 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Citrate treatment did not significantly influence expression of genes for starch degradation enzymes and signaling factors in rice under submergence.

Treatment
citratee3
Gene
genes encoding starch degradation enzymes and signaling factorse4
Outcome
expressione4
Direction
not significantly influencede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Citrate pretreatment promotes rice (Oryza sativa L.) coleoptile elongation under submergence”

✓ located verbatim in the source · title, characters 0–92 · show in text ↑
e3

“the expression of genes related to anaerobic respiration and phenylpropanoid biosynthesis was activated in the embryo of citrate treated seeds during submergence”

✓ located verbatim in the source · abstract, characters 578–739 · show in text ↑
e4

“the expression of genes encoding starch degradation enzymes and signaling factors was not significantly influenced”

✓ located verbatim in the source · abstract, characters 746–860 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Citrate pretreatment did not alter starch and soluble sugar amounts in the rice endosperm.

Organ / stage
endosperme5
Treatment
citrate pretreatmente5
Outcome
starch and soluble sugar amountse5
Direction
not alterede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Citrate pretreatment promotes rice (Oryza sativa L.) coleoptile elongation under submergence”

✓ located verbatim in the source · title, characters 0–92 · show in text ↑
e5

“starch and soluble sugar amounts in the endosperm were not altered by citrate pretreatment”

✓ located verbatim in the source · abstract, characters 875–965 · show in text ↑
Mechanismhypothesisoriginal resultpositivemeasured

Claim · model-written summary

Citrate pretreatment is suggested to promote rice coleoptile elongation under submergence through transcriptional regulation of anaerobic energy genes, possibly via an unknown phenylpropanoid-related mechanism.

Treatment
citrate pretreatmente6
Gene
genes related to anaerobic energy productione6
Outcome
coleoptile elongatione6
Qualifier
possibly through an unknown mechanism related to phenylpropanoid metabolisme6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“Citrate pretreatment promotes rice (Oryza sativa L.) coleoptile elongation under submergence”

✓ located verbatim in the source · title, characters 0–92 · show in text ↑
e6

“These results suggest that citrate pretreatment promotes coleoptile elongation in rice seeds under submergence via the transcriptional regulation of genes related to anaerobic energy production, possibly through an unknown mechanism related to phenylpropanoid metabolism”

✓ located verbatim in the source · abstract, characters 967–1237 · show in text ↑

organic acid · growth · Oryza sativa (rice)Positive and negative results

6 papers: 5 positive, 1 negative or no effect

4 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

2 papers more in this group

See all 6 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.