Paper · 2024 · Chemical and Biological Technologies in Agriculture

Lignin synthesis pathway in response to Rhizoctonia solani Kühn infection in potato (Solanum tuberosum L.)

XinYu Yang; Wangjun Zhang; Wangjun Zhang; et al.

13
claims
21
verbatim quotes
16
citations
3
research areas
✓
Open access · cc-by-nc-nd

Abstract

Potato black scurf caused by Rhizoctonia solani Kühn is widespread worldwide. The exploration and analysis of the infection mechanism of Rhizoctonia solani Kühn has important scientific significance to enhance the disease resistance of potato and other horticultural crops, and then break the restriction of fungal harm to agricultural production. The physiological and biochemical indexes and the expression levels of related genes were measured at 0, 1, 4, 8 and 16 days (T0, T1, T2, T3, T4) after inoculation with pathogenic bacteria. The results showed that the contents of L-phenylalanine ammonia-lyase (PAL), peroxidase (POD), lignin, total phenols (TP), and flavonoids increased significantly in potato after infection by Rhizoctonia solani Kühn, with the contents of PAL and POD reaching a peak at 8 d and then decreasing, and the contents of lignin and total phenols changing most significantly, reaching the highest levels at day 8 (T3) and day 16 (T4), respectively. During the infestation, the content of eight phenolic compounds increased, and the genes responsible for the lignin synthesis pathway were upregulated. However, in the later stage of infestation, the expression of two genes (PAL PG0031457 and PG2021549, HCT PG0014959, and COMT PG0011266) was down-regulated. In the correlation analysis, gene expression levels of all the genes, except POD (PG0005062), CCoAOMT (PG0018688), and COMT (PG0011266), were found to be positively correlated with the contents of lignin, total phenols, flavonoids, PAL, POD, and eight phenolic substances. Therefore, based on a sound understanding of the occurrence mechanism of Potato black scurf, this experiment analyzed the effect of Rhizoctonia solani Kühn infestation on the content of relevant metabolites in the lignin synthesis pathway as well as gene expression in potatoes, which provides a scientific basis for the prevention and control management of potato black scurf.

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Claims 13

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

L-phenylalanine ammonia-lyase (PAL) content increased significantly after infection.

Treatment
infection by Rhizoctonia solani Kühne0
Interactor
Rhizoctonia solani KühnRhizoctonia solanie0pathogen
Outcome
contents of L-phenylalanine ammonia-lyase (PAL)e0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Rhizoctonia solani
Rhizoctonia solani · Interactoranonimowy, niektóre prawa zastrzeżone (CC BY) · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“The results showed that the contents of L-phenylalanine ammonia-lyase (PAL), peroxidase (POD), lignin, total phenols (TP), and flavonoids increased significantly in potato after infection by Rhizoctonia solani Kühn”

✓ located verbatim in the source · abstract, characters 538–752 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

peroxidase (POD) content increased significantly after infection.

Treatment
infection by Rhizoctonia solani Kühne0
Interactor
Rhizoctonia solani KühnRhizoctonia solanie0pathogen
Outcome
peroxidase (POD)e0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Rhizoctonia solani
Rhizoctonia solani · Interactoranonimowy, niektóre prawa zastrzeżone (CC BY) · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“The results showed that the contents of L-phenylalanine ammonia-lyase (PAL), peroxidase (POD), lignin, total phenols (TP), and flavonoids increased significantly in potato after infection by Rhizoctonia solani Kühn”

✓ located verbatim in the source · abstract, characters 538–752 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

lignin content increased significantly after infection.

Treatment
infection by Rhizoctonia solani Kühne0
Interactor
Rhizoctonia solani KühnRhizoctonia solanie0pathogen
Outcome
lignine0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Rhizoctonia solani
Rhizoctonia solani · Interactoranonimowy, niektóre prawa zastrzeżone (CC BY) · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“The results showed that the contents of L-phenylalanine ammonia-lyase (PAL), peroxidase (POD), lignin, total phenols (TP), and flavonoids increased significantly in potato after infection by Rhizoctonia solani Kühn”

✓ located verbatim in the source · abstract, characters 538–752 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

total phenols (TP) content increased significantly after infection.

Treatment
infection by Rhizoctonia solani Kühne0
Interactor
Rhizoctonia solani KühnRhizoctonia solanie0pathogen
Outcome
total phenols (TP)e0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Rhizoctonia solani
Rhizoctonia solani · Interactoranonimowy, niektóre prawa zastrzeżone (CC BY) · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“The results showed that the contents of L-phenylalanine ammonia-lyase (PAL), peroxidase (POD), lignin, total phenols (TP), and flavonoids increased significantly in potato after infection by Rhizoctonia solani Kühn”

✓ located verbatim in the source · abstract, characters 538–752 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

flavonoids content increased significantly after infection.

Treatment
infection by Rhizoctonia solani Kühne0
Interactor
Rhizoctonia solani KühnRhizoctonia solanie0pathogen
Outcome
flavonoidse0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Rhizoctonia solani
Rhizoctonia solani · Interactoranonimowy, niektóre prawa zastrzeżone (CC BY) · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“The results showed that the contents of L-phenylalanine ammonia-lyase (PAL), peroxidase (POD), lignin, total phenols (TP), and flavonoids increased significantly in potato after infection by Rhizoctonia solani Kühn”

✓ located verbatim in the source · abstract, characters 538–752 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

PAL reached a peak or highest level at 8 d.

Taxon
potato (Solanum tuberosum L.)Solanum tuberosumt0
Outcome
contents of PALe0
Direction
peake0
Qualifier
8 de0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“with the contents of PAL and POD reaching a peak at 8 d and then decreasing, and the contents of lignin and total phenols changing most significantly, reaching the highest levels at day 8 (T3) and day 16 (T4), respectively.”

✓ located verbatim in the source · abstract, characters 754–977 · show in text ↑
t0

“potato (Solanum tuberosum L.)”

✓ located verbatim in the source · title, characters 77–106 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

POD reached a peak or highest level at 8 d.

Taxon
potato (Solanum tuberosum L.)Solanum tuberosumt0
Outcome
PODe0
Direction
peake0
Qualifier
8 de0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“with the contents of PAL and POD reaching a peak at 8 d and then decreasing, and the contents of lignin and total phenols changing most significantly, reaching the highest levels at day 8 (T3) and day 16 (T4), respectively.”

✓ located verbatim in the source · abstract, characters 754–977 · show in text ↑
t0

“potato (Solanum tuberosum L.)”

✓ located verbatim in the source · title, characters 77–106 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

lignin reached a peak or highest level at day 8 (T3).

Taxon
potato (Solanum tuberosum L.)Solanum tuberosumt0
Outcome
lignine0
Direction
highest levelse0
Qualifier
day 8 (T3)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“with the contents of PAL and POD reaching a peak at 8 d and then decreasing, and the contents of lignin and total phenols changing most significantly, reaching the highest levels at day 8 (T3) and day 16 (T4), respectively.”

✓ located verbatim in the source · abstract, characters 754–977 · show in text ↑
t0

“potato (Solanum tuberosum L.)”

✓ located verbatim in the source · title, characters 77–106 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

total phenols reached a peak or highest level at day 16 (T4).

Taxon
potato (Solanum tuberosum L.)Solanum tuberosumt0
Outcome
total phenolse0
Direction
highest levelse0
Qualifier
day 16 (T4)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“with the contents of PAL and POD reaching a peak at 8 d and then decreasing, and the contents of lignin and total phenols changing most significantly, reaching the highest levels at day 8 (T3) and day 16 (T4), respectively.”

✓ located verbatim in the source · abstract, characters 754–977 · show in text ↑
t0

“potato (Solanum tuberosum L.)”

✓ located verbatim in the source · title, characters 77–106 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The content of eight phenolic compounds increased during infestation.

Taxon
potato (Solanum tuberosum L.)Solanum tuberosumt0
Outcome
content of eight phenolic compoundse0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“During the infestation, the content of eight phenolic compounds increased, and the genes responsible for the lignin synthesis pathway were upregulated.”

✓ located verbatim in the source · abstract, characters 978–1129 · show in text ↑
t0

“potato (Solanum tuberosum L.)”

✓ located verbatim in the source · title, characters 77–106 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Genes responsible for the lignin synthesis pathway were upregulated during infestation.

Taxon
potato (Solanum tuberosum L.)Solanum tuberosumt0
Outcome
genes responsible for the lignin synthesis pathwaye0
Direction
upregulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“During the infestation, the content of eight phenolic compounds increased, and the genes responsible for the lignin synthesis pathway were upregulated.”

✓ located verbatim in the source · abstract, characters 978–1129 · show in text ↑
t0

“potato (Solanum tuberosum L.)”

✓ located verbatim in the source · title, characters 77–106 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The named lignin pathway genes were down-regulated later in infestation.

Taxon
potato (Solanum tuberosum L.)Solanum tuberosumt0
Gene
PAL PG0031457 and PG2021549, HCT PG0014959, and COMT PG0011266e0
Outcome
expression of two genese0
Direction
down-regulatede0
Qualifier
later stage of infestatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“However, in the later stage of infestation, the expression of two genes (PAL PG0031457 and PG2021549, HCT PG0014959, and COMT PG0011266) was down-regulated.”

✓ located verbatim in the source · abstract, characters 1130–1286 · show in text ↑
t0

“potato (Solanum tuberosum L.)”

✓ located verbatim in the source · title, characters 77–106 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Expression of most measured genes was positively correlated with lignin, phenol, flavonoid, PAL, POD and phenolic substance contents.

Taxon
potato (Solanum tuberosum L.)Solanum tuberosumt0
Gene
all the genese0
Outcome
contents of lignin, total phenols, flavonoids, PAL, POD, and eight phenolic substancese0
Direction
positively correlatede0
Qualifier
except POD (PG0005062), CCoAOMT (PG0018688), and COMT (PG0011266)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“In the correlation analysis, gene expression levels of all the genes, except POD (PG0005062), CCoAOMT (PG0018688), and COMT (PG0011266), were found to be positively correlated with the contents of lignin, total phenols, flavonoids, PAL, POD, and eight phenolic substances.”

✓ located verbatim in the source · abstract, characters 1287–1559 · show in text ↑
t0

“potato (Solanum tuberosum L.)”

✓ located verbatim in the source · title, characters 77–106 · show in text ↑

Rhizoctonia solani · molecular: metabolites · Solanum tuberosum (potato)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

infection · quality: phytochemicals · Solanum tuberosum (potato)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. negative
See all 2 papers →

infection · physiology: antioxidant enzymes · Solanum tuberosum (potato)Positive and negative results

8 papers: 7 positive, 1 negative or no effect

6 papers in the same direction as this paper · 1 in the opposite direction

  1. no effect
  2. positive
  3. positive

4 papers more in this group

See all 8 papers →

infection · molecular: metabolites · Solanum tuberosum (potato)Positive and negative results

11 papers: 6 positive, 5 negative or no effect

5 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. negative
  3. negative

7 papers more in this group

See all 11 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.