Paper · 2024 · International Journal of Molecular Sciences

Disruption of Poly(ADP-ribosyl)ation Improves Plant Tolerance to Methyl Viologen-Mediated Oxidative Stress via Induction of ROS Scavenging Enzymes

Natalia O. Kalinina; Nadezhda Spechenkova; Irina Ilina; et al.

11
claims
16
verbatim quotes
5
citations
2
research areas
✓
Open access · cc-by

Abstract

ADP-ribosylation (ADPRylation) is a mechanism which post-translationally modifies proteins in eukaryotes in order to regulate a broad range of biological processes including programmed cell death, cell signaling, DNA repair, and responses to biotic and abiotic stresses. Poly(ADP-ribosyl) polymerases (PARPs) play a key role in the process of ADPRylation, which modifies target proteins by attaching ADP-ribose molecules. Here, we investigated whether and how PARP1 and PARylation modulate responses of Nicotiana benthamiana plants to methyl viologen (MV)-induced oxidative stress. It was found that the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity. This in turn reduced the accumulation of PARylated proteins and significantly increased the gene expression of major ROS scavenging enzymes including SOD (NbMnSOD; mitochondrial manganese SOD), CAT (NbCAT2), GR (NbGR), and APX (NbAPX5), and inhibited cell death. This mechanism may be part of a broader network that regulates plant sensitivity to oxidative stress through various genetically programmed pathways.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 11

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

RNA silencing of the PARP1 gene delayed burst of reactive oxygen species (ROS).

Taxon
N. benthamianaNicotiana benthamianae0
Organ / stage
leavese0
Treatment
RNA silencing of the PARP1 genee0
Outcome
burst of reactive oxygen species (ROS)e0
Direction
delayede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

RNA silencing of the PARP1 gene delayed cell death.

Taxon
N. benthamianaNicotiana benthamianae0
Organ / stage
leavese0
Treatment
RNA silencing of the PARP1 genee0
Outcome
cell deathe0
Direction
delayede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

RNA silencing of the PARP1 gene delayed loss of tissue viability.

Taxon
N. benthamianaNicotiana benthamianae0
Organ / stage
leavese0
Treatment
RNA silencing of the PARP1 genee0
Outcome
loss of tissue viabilitye0
Direction
delayede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

applying the pharmacological inhibitor 3-aminobenzamide (3AB) delayed burst of reactive oxygen species (ROS).

Taxon
N. benthamianaNicotiana benthamianae0
Organ / stage
leavese0
Treatment
applying the pharmacological inhibitor 3-aminobenzamide (3AB)e0
Outcome
burst of reactive oxygen species (ROS)e0
Direction
delayede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

applying the pharmacological inhibitor 3-aminobenzamide (3AB) delayed cell death.

Taxon
N. benthamianaNicotiana benthamianae0
Organ / stage
leavese0
Treatment
applying the pharmacological inhibitor 3-aminobenzamide (3AB)e0
Outcome
cell deathe0
Direction
delayede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

applying the pharmacological inhibitor 3-aminobenzamide (3AB) delayed loss of tissue viability.

Taxon
N. benthamianaNicotiana benthamianae0
Organ / stage
leavese0
Treatment
applying the pharmacological inhibitor 3-aminobenzamide (3AB)e0
Outcome
loss of tissue viabilitye0
Direction
delayede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

PARP1 suppression reduced PARylated protein accumulation.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
RNA silencing of the PARP1 genee0
Outcome
accumulation of PARylated proteinse1
Direction
reducede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
e1

“This in turn reduced the accumulation of PARylated proteins and significantly increased the gene expression of major ROS scavenging enzymes including SOD (NbMnSOD; mitochondrial manganese SOD), CAT (NbCAT2), GR (NbGR), and APX (NbAPX5), and inhibited cell death”

✓ located verbatim in the source · abstract, characters 895–1156 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

PARP1 suppression increased expression of NbMnSOD.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
RNA silencing of the PARP1 genee0
Gene
NbMnSODe1
Outcome
gene expressione1
Direction
increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
e1

“This in turn reduced the accumulation of PARylated proteins and significantly increased the gene expression of major ROS scavenging enzymes including SOD (NbMnSOD; mitochondrial manganese SOD), CAT (NbCAT2), GR (NbGR), and APX (NbAPX5), and inhibited cell death”

✓ located verbatim in the source · abstract, characters 895–1156 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

PARP1 suppression increased expression of NbCAT2.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
RNA silencing of the PARP1 genee0
Gene
NbCAT2e1
Outcome
gene expressione1
Direction
increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
e1

“This in turn reduced the accumulation of PARylated proteins and significantly increased the gene expression of major ROS scavenging enzymes including SOD (NbMnSOD; mitochondrial manganese SOD), CAT (NbCAT2), GR (NbGR), and APX (NbAPX5), and inhibited cell death”

✓ located verbatim in the source · abstract, characters 895–1156 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

PARP1 suppression increased expression of NbGR.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
RNA silencing of the PARP1 genee0
Gene
NbGRe1
Outcome
gene expressione1
Direction
increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
e1

“This in turn reduced the accumulation of PARylated proteins and significantly increased the gene expression of major ROS scavenging enzymes including SOD (NbMnSOD; mitochondrial manganese SOD), CAT (NbCAT2), GR (NbGR), and APX (NbAPX5), and inhibited cell death”

✓ located verbatim in the source · abstract, characters 895–1156 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

PARP1 suppression increased expression of NbAPX5.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
RNA silencing of the PARP1 genee0
Gene
NbAPX5e1
Outcome
gene expressione1
Direction
increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the burst of reactive oxygen species (ROS), cell death, and loss of tissue viability invoked by MV in N. benthamiana leaves was significantly delayed by both the RNA silencing of the PARP1 gene and by applying the pharmacological inhibitor 3-aminobenzamide (3AB) to inhibit PARylation activity”

✓ located verbatim in the source · abstract, characters 600–893 · show in text ↑
e1

“This in turn reduced the accumulation of PARylated proteins and significantly increased the gene expression of major ROS scavenging enzymes including SOD (NbMnSOD; mitochondrial manganese SOD), CAT (NbCAT2), GR (NbGR), and APX (NbAPX5), and inhibited cell death”

✓ located verbatim in the source · abstract, characters 895–1156 · show in text ↑

loss of function · physiology: oxidative · Nicotiana benthamianaPositive and negative results

16 papers: 6 positive, 10 negative or no effect

5 papers in the same direction as this paper · 10 in the opposite direction

  1. negative
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loss of function · growth · Nicotiana benthamianaPositive and negative results

21 papers: 4 positive, 17 negative or no effect

3 papers in the same direction as this paper · 17 in the opposite direction

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loss of function · cytology · Nicotiana benthamianaPositive and negative results

33 papers: 9 positive, 24 negative or no effect

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loss of function · molecular: metabolites · Nicotiana benthamianaPositive and negative results

35 papers: 10 positive, 25 negative or no effect

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loss of function · molecular: expression · Nicotiana benthamianaPositive and negative results

43 papers: 19 positive, 24 negative or no effect

18 papers in the same direction as this paper · 24 in the opposite direction

  1. negative
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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.