Paper · 2024 · The Plant Cell

The OsEIL1–OsWOX11 transcription factor module controls rice crown root development in response to soil compaction

Yuxiang Li; Juan Wang; Yadi Gao; et al.

10
claims
17
verbatim quotes
25
citations
3
research areas
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Open access · cc-by

Abstract

Optimizing the root architecture of crops is an effective strategy for improving crop yields. Soil compaction is a serious global problem that limits crop productivity by restricting root growth, but the underlying molecular mechanisms are largely unclear. Here, we show that ethylene stimulates rice (Oryza sativa) crown root development in response to soil compaction. First, we demonstrate that compacted soil promotes ethylene production and the accumulation of ETHYLENE INSENSITIVE 3-LIKE 1 (OsEIL1) in rice roots, stimulating crown root primordia initiation and development, thereby increasing crown root number in lower stem nodes. Through transcriptome profiling and molecular analyses, we reveal that OsEIL1 directly activates the expression of WUSCHEL-RELATED HOMEOBOX 11 (OsWOX11), an activator of crown root emergence and growth, and that OsWOX11 mutations delay crown root development, thus impairing the plant's response to ethylene and soil compaction. Genetic analysis demonstrates that OsWOX11 functions downstream of OsEIL1. In summary, our results demonstrate that the OsEIL1-OsWOX11 module regulates ethylene action during crown root development in response to soil compaction, providing a strategy for the genetic modification of crop root architecture and grain agronomic traits.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

Ethylene stimulates rice crown root development in response to compaction.

Treatment
soil compactione0
Compound
ethylenee0
Outcome
crown root developmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“ethylene stimulates rice (Oryza sativa) crown root development in response to soil compaction”

✓ located verbatim in the source · abstract, characters 276–369 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Compacted soil promotes ethylene production in rice roots.

Organ / stage
rice rootse0
Treatment
compacted soile0
Outcome
ethylene productione0
Direction
promotese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“compacted soil promotes ethylene production and the accumulation of ETHYLENE INSENSITIVE 3-LIKE 1 (OsEIL1) in rice roots”

✓ located verbatim in the source · abstract, characters 398–518 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Compacted soil promotes OsEIL1 accumulation in rice roots.

Treatment
compacted soile0
Gene
ETHYLENE INSENSITIVE 3-LIKE 1 (OsEIL1)e0
Outcome
accumulation of ETHYLENE INSENSITIVE 3-LIKE 1 (OsEIL1)e0
Direction
promotese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“compacted soil promotes ethylene production and the accumulation of ETHYLENE INSENSITIVE 3-LIKE 1 (OsEIL1) in rice roots”

✓ located verbatim in the source · abstract, characters 398–518 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

The compaction response stimulates crown root primordia initiation and development.

Gene
OsEIL1e1
Outcome
crown root primordia initiation and developmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“stimulating crown root primordia initiation and development, thereby increasing crown root number in lower stem nodes”

✓ located verbatim in the source · abstract, characters 520–637 · show in text ↑
e1

“compacted soil promotes ethylene production and the accumulation of ETHYLENE INSENSITIVE 3-LIKE 1 (OsEIL1) in rice roots”

✓ located verbatim in the source · abstract, characters 398–518 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

The compaction response increases crown root number in lower stem nodes.

Organ / stage
lower stem nodese0
Gene
OsEIL1e1
Outcome
crown root numbere0
Direction
increasinge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“stimulating crown root primordia initiation and development, thereby increasing crown root number in lower stem nodes”

✓ located verbatim in the source · abstract, characters 520–637 · show in text ↑
e1

“compacted soil promotes ethylene production and the accumulation of ETHYLENE INSENSITIVE 3-LIKE 1 (OsEIL1) in rice roots”

✓ located verbatim in the source · abstract, characters 398–518 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

OsEIL1 directly activates OsWOX11 expression.

Gene
OsEIL1e0
Outcome
expression of WUSCHEL-RELATED HOMEOBOX 11 (OsWOX11)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsEIL1 directly activates the expression of WUSCHEL-RELATED HOMEOBOX 11 (OsWOX11)”

✓ located verbatim in the source · abstract, characters 710–791 · show in text ↑
t0

“rice crown root development”

✓ located verbatim in the source · title, characters 56–83 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

OsWOX11 activates crown root emergence and growth.

Gene
OsWOX11e0
Outcome
crown root emergence and growthe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsWOX11), an activator of crown root emergence and growth”

✓ located verbatim in the source · abstract, characters 783–840 · show in text ↑
t0

“rice crown root development”

✓ located verbatim in the source · title, characters 56–83 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsWOX11 mutations delay crown root development.

Treatment
OsWOX11 mutationse0
Gene
OsWOX11e0
Outcome
crown root developmente0
Direction
delaye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsWOX11 mutations delay crown root development, thus impairing the plant's response to ethylene and soil compaction”

✓ located verbatim in the source · abstract, characters 851–966 · show in text ↑
t0

“rice crown root development”

✓ located verbatim in the source · title, characters 56–83 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

OsWOX11 mutations impair response to ethylene and soil compaction.

Treatment
OsWOX11 mutationse0
Outcome
response to ethylene and soil compactione0
Direction
impairinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsWOX11 mutations delay crown root development, thus impairing the plant's response to ethylene and soil compaction”

✓ located verbatim in the source · abstract, characters 851–966 · show in text ↑
t0

“rice crown root development”

✓ located verbatim in the source · title, characters 56–83 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

OsWOX11 functions downstream of OsEIL1.

Gene
OsWOX11e0
Outcome
functions downstream of OsEIL1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsWOX11 functions downstream of OsEIL1”

✓ located verbatim in the source · abstract, characters 1003–1041 · show in text ↑
t0

“rice crown root development”

✓ located verbatim in the source · title, characters 56–83 · show in text ↑

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