Paper · 2009 · The Plant Cell

The WUSCHEL-Related Homeobox GeneWOX11Is Required to Activate Shoot-Borne Crown Root Development in Rice

Yu Zhao; Yongfeng Hu; Mingqiu Dai; et al.

9
claims
19
verbatim quotes
425
citations
3
research areas
✓
Open access

Abstract

In rice (Oryza sativa), the shoot-borne crown roots are the major root type and are initiated at lower stem nodes as part of normal plant development. However, the regulatory mechanism of crown root development is poorly understood. In this work, we show that a WUSCHEL-related Homeobox (WOX) gene, WOX11, is involved in the activation of crown root emergence and growth. WOX11 was found to be expressed in emerging crown roots and later in cell division regions of the root meristem. The expression could be induced by exogenous auxin or cytokinin. Loss-of-function mutation or downregulation of the gene reduced the number and the growth rate of crown roots, whereas overexpression of the gene induced precocious crown root growth and dramatically increased the root biomass by producing crown roots at the upper stem nodes and the base of florets. The expressions of auxin- and cytokinin-responsive genes were affected in WOX11 overexpression and RNA interference transgenic plants. Further analysis showed that WOX11 directly repressed RR2, a type-A cytokinin-responsive regulator gene that was found to be expressed in crown root primordia. The results suggest that WOX11 may be an integrator of auxin and cytokinin signaling that feeds into RR2 to regulate cell proliferation during crown root development.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

WOX11 is expressed in emerging crown roots and later in cell division regions of the root meristem in rice.

Organ / stage
emerging crown rootse1
Gene
WOX11e1
Outcome
expressed in emerging crown rootse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In rice (Oryza sativa), the shoot-borne crown roots are the major root type”

✓ located verbatim in the source · abstract, characters 0–75 · show in text ↑
e1

“WOX11 was found to be expressed in emerging crown roots and later in cell division regions of the root meristem”

✓ located verbatim in the source · abstract, characters 372–483 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Exogenous auxin or cytokinin induces WOX11 expression in rice.

Treatment
exogenous auxin or cytokinine2
Outcome
expressione2
Direction
inducede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In rice (Oryza sativa), the shoot-borne crown roots are the major root type”

✓ located verbatim in the source · abstract, characters 0–75 · show in text ↑
e2

“The expression could be induced by exogenous auxin or cytokinin”

✓ located verbatim in the source · abstract, characters 485–548 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Loss-of-function or downregulation of WOX11 reduced the number and growth rate of rice crown roots.

Treatment
Loss-of-function mutation or downregulation of the genee3
Outcome
the number and the growth rate of crown rootse3
Direction
reducede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In rice (Oryza sativa), the shoot-borne crown roots are the major root type”

✓ located verbatim in the source · abstract, characters 0–75 · show in text ↑
e3

“Loss-of-function mutation or downregulation of the gene reduced the number and the growth rate of crown roots”

✓ located verbatim in the source · abstract, characters 550–659 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

WOX11 overexpression induced precocious crown root growth in rice.

Treatment
overexpression of the genee4
Outcome
precocious crown root growthe4
Direction
inducede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In rice (Oryza sativa), the shoot-borne crown roots are the major root type”

✓ located verbatim in the source · abstract, characters 0–75 · show in text ↑
e4

“overexpression of the gene induced precocious crown root growth”

✓ located verbatim in the source · abstract, characters 669–732 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

WOX11 overexpression dramatically increased rice root biomass.

Treatment
overexpression of the genee4
Outcome
root biomasse5
Direction
dramatically increasede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In rice (Oryza sativa), the shoot-borne crown roots are the major root type”

✓ located verbatim in the source · abstract, characters 0–75 · show in text ↑
e4

“overexpression of the gene induced precocious crown root growth”

✓ located verbatim in the source · abstract, characters 669–732 · show in text ↑
e5

“dramatically increased the root biomass”

✓ located verbatim in the source · abstract, characters 737–776 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

WOX11 overexpression produced crown roots at the upper stem nodes and the base of florets in rice.

Organ / stage
upper stem nodese6
Outcome
producing crown roots at the upper stem nodes and the base of floretse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In rice (Oryza sativa), the shoot-borne crown roots are the major root type”

✓ located verbatim in the source · abstract, characters 0–75 · show in text ↑
e6

“producing crown roots at the upper stem nodes and the base of florets”

✓ located verbatim in the source · abstract, characters 780–849 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

WOX11 overexpression and RNA interference affected expression of auxin- and cytokinin-responsive genes in rice.

Treatment
WOX11 overexpression and RNA interferencee7
Gene
WOX11e7
Outcome
expressions of auxin- and cytokinin-responsive genese7

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In rice (Oryza sativa), the shoot-borne crown roots are the major root type”

✓ located verbatim in the source · abstract, characters 0–75 · show in text ↑
e7

“The expressions of auxin- and cytokinin-responsive genes were affected in WOX11 overexpression and RNA interference transgenic plants”

✓ located verbatim in the source · abstract, characters 851–984 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

WOX11 directly represses RR2, a type-A cytokinin-responsive regulator gene in rice.

Gene
RR2e1
Outcome
RR2e1
Direction
repressede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In rice (Oryza sativa), the shoot-borne crown roots are the major root type”

✓ located verbatim in the source · abstract, characters 0–75 · show in text ↑
e1

“WOX11 directly repressed RR2, a type-A cytokinin-responsive regulator gene that was found to be expressed in crown root primordia”

✓ located verbatim in the source · abstract, characters 1015–1144 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

WOX11 may integrate auxin and cytokinin signalling that feeds into RR2 to regulate cell proliferation during crown root development in rice.

Gene
WOX11e1
Outcome
cell proliferation during crown root developmente1
Qualifier
may be an integrator of auxin and cytokinin signalinge1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“In rice (Oryza sativa), the shoot-borne crown roots are the major root type”

✓ located verbatim in the source · abstract, characters 0–75 · show in text ↑
e1

“The results suggest that WOX11 may be an integrator of auxin and cytokinin signaling that feeds into RR2 to regulate cell proliferation during crown root development”

✓ located verbatim in the source · abstract, characters 1146–1311 · show in text ↑

loss of function · growth · Oryza sativa (rice)Positive and negative results

132 papers: 28 positive, 104 negative or no effect

103 papers in the same direction as this paper · 28 in the opposite direction

  1. negative
  2. negative
  3. positive

128 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.