Paper · 2023 · Biomolecules

Effect of ABA Pre-Treatment on Rice Plant Transcriptome Response to Multiple Abiotic Stress

Fatemeh Habibpourmehraban; Farhad Masoomi-Aladizgeh; Paul A. Haynes

6
claims
13
verbatim quotes
9
citations
2
research areas
✓
Open access · cc-by

Abstract

Half of the world's population depends on rice plant cultivation, yet environmental stresses continue to substantially impact the production of one of our most valuable staple foods. The aim of this study was to investigate the changes in the transcriptome of the IAC1131 rice genotype when exposed to a suite of multiple abiotic stresses, either with or without pre-treatment with the plant hormone ABA (Abscisic acid). Four groups of IAC1131 rice plants were grown including control plants incubated with ABA, non-ABA-incubated control plants, stressed plants incubated with ABA, and non-ABA-incubated stressed plants, with leaf samples harvested after 0 days (control) and 4 days (stressed). We found that high concentrations of ABA applied exogenously to the control plants under normal conditions did not alter the IAC1131 transcriptome profile significantly. The observed changes in the transcriptome of the IAC1131 plants in response to multiple abiotic stress were made even more pronounced by ABA pre-treatment, which induced the upregulation of a significant number of additional genes. Although ABA application impacted the plant transcriptome, multiple abiotic stress was the dominant factor in modifying gene expression in the IAC1131 plants. Exogenous ABA application may mitigate the effects of stress through ABA-dependent signalling pathways related to biological photosynthesis functions. Pre-treatment with ABA alters the photosynthesis function negatively by reducing stomatal conductance, therefore helping plants to conserve the energy required for survival under unfavourable environmental conditions.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Exogenous ABA did not significantly change the control rice transcriptome under normal conditions.

Material
IAC1131e1
Treatment
ABA applied exogenouslye0
Outcome
IAC1131 transcriptome profilee0
Direction
did not altere0
Comparator
control plants under normal conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“high concentrations of ABA applied exogenously to the control plants under normal conditions did not alter the IAC1131 transcriptome profile significantly.”

✓ located verbatim in the source · abstract, characters 709–864 · show in text ↑
e1

“IAC1131 rice genotype”

✓ located verbatim in the source · abstract, characters 264–285 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ABA pretreatment made stress induced rice transcriptome changes more pronounced.

Material
IAC1131e1
Treatment
ABA pre-treatmente0
Outcome
changes in the transcriptomee0
Direction
more pronouncede0
Comparator
multiple abiotic stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The observed changes in the transcriptome of the IAC1131 plants in response to multiple abiotic stress were made even more pronounced by ABA pre-treatment”

✓ located verbatim in the source · abstract, characters 865–1019 · show in text ↑
e1

“IAC1131 rice genotype”

✓ located verbatim in the source · abstract, characters 264–285 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

ABA pretreatment upregulated a significant number of additional genes under multiple stress.

Material
IAC1131e2
Treatment
ABA pre-treatmente0
Outcome
additional genese0
Direction
upregulatione0
Comparator
multiple abiotic stresse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“ABA pre-treatment, which induced the upregulation of a significant number of additional genes.”

✓ located verbatim in the source · abstract, characters 1002–1096 · show in text ↑
e1

“in response to multiple abiotic stress”

✓ located verbatim in the source · abstract, characters 929–967 · show in text ↑
e2

“IAC1131 rice genotype”

✓ located verbatim in the source · abstract, characters 264–285 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Multiple abiotic stress was the dominant factor modifying IAC1131 gene expression.

Material
IAC1131e1
Treatment
multiple abiotic stresse0
Outcome
gene expressione0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“multiple abiotic stress was the dominant factor in modifying gene expression in the IAC1131 plants.”

✓ located verbatim in the source · abstract, characters 1156–1255 · show in text ↑
e1

“IAC1131 rice genotype”

✓ located verbatim in the source · abstract, characters 264–285 · show in text ↑
Mechanismhypothesisoriginal resultpositivemeasured

Claim · model-written summary

Authors propose ABA dependent signalling may mitigate stress effects on photosynthesis.

Taxon
rice plantOryza sativae1
Treatment
Exogenous ABA applicatione0
Outcome
effects of stresse0
Direction
mitigatee0
Qualifier
ABA-dependent signalling pathways related to biological photosynthesis functionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Exogenous ABA application may mitigate the effects of stress through ABA-dependent signalling pathways related to biological photosynthesis functions.”

✓ located verbatim in the source · abstract, characters 1256–1406 · show in text ↑
e1

“rice plant cultivation”

✓ located verbatim in the source · abstract, characters 42–64 · show in text ↑
Intervention effectauthor interpretationoriginal resultmixedmeasured

Claim · model-written summary

ABA pretreatment reduces stomatal conductance, negatively altering photosynthesis function.

Taxon
rice plantOryza sativae1
Treatment
Pre-treatment with ABAe0
Outcome
stomatal conductancee0
Direction
reducinge0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Pre-treatment with ABA alters the photosynthesis function negatively by reducing stomatal conductance”

✓ located verbatim in the source · abstract, characters 1407–1508 · show in text ↑
e1

“rice plant cultivation”

✓ located verbatim in the source · abstract, characters 42–64 · show in text ↑

(+)-abscisic acid · molecular: expression · Oryza sativa (rice)Positive and negative results

69 papers: 54 positive, 15 negative or no effect

14 papers in the same direction as this paper · 54 in the opposite direction

  1. negative
  2. positive
  3. positive

65 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.