Paper · 2022 · Frontiers in Bioscience-Landmark

OsDOF11 Promotes Crown Root Formation via Cytokinin in Oryza Sativa

Xinyi Dong; Mengyan Zeng; Weixin Hu; et al.

10
claims
18
verbatim quotes
3
citations
3
research areas
✓
Open access · cc-by

Abstract

Background: Crown root is the main part of root system, which performs an important role in rice growth and development, especially in nutrition and water assimilation. Previously, we reported negative feedback regulation loop between Oryza sativa DNA BINDING WITH ONE FINGER 11 (OsDOF11) and cytokinin by Oryza sativa CYTOKININ OXIDASE/DEHYDROGENASE 4 (OsCKX4) in rice development. Methods: Reverse transcription quantitative RT-PCR analyses was used to analyze the related gene transcript level. Nitrogen and hormone were measured by CHN-Nitrogen analyser and Liquid chromatography mass spectrometer, respectively. Exogenous application of cytokinin and [13C] sucrose labeled stable isotope uptake experiments help us to explain the relationship between OsDOF11 and cytokinin. Results: We demonstrate the role of OsDOF11 in root development. We note that the loss function of OsDOF11 displays the reduced crown roots number, low activity of nitrogen assimilation and low content of cytokinin and auxin. The expression level of WUSCHEL-related homeobox (OsWOX11), A-type response regulator 2 (OsRR2), OsRR3, and OsCKX4 were decreased in osdof11-1, as well as in OsDOF11 RNA interference 9 mutants (RNAi-9 lines). Through Exogenous application of multiple concentrations of cytokinin as treatment to osdof11-1 mutant, RNAi-9 lines, and wild type (WT). We found that the crown roots number of osdof11-1 plants were rescued as the cytokinin concentration increased gradually from 1 μM to 10 μM, but the effect was weaker in RNAi-9 line. And cytokinin inhibited sucrose uptake activity from Murashige-Skoog medium with 3.0% sucrose (MS30) by OsDOF11 in rice root. Conclusions: OsDOF11 promotes crown root formation via cytokinin in oryza sativa. These results provide a physiological basis for further analysis of the OsDOF11 function of in rice root development.

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The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Loss of OsDOF11 reduced crown root number.

Gene
OsDOF11e0
Outcome
crown roots numbere0
Direction
reducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the loss function of OsDOF11 displays the reduced crown roots number”

✓ located verbatim in the source · abstract, characters 857–925 · show in text ↑
e1

“OsDOF11 in rice root.”

✓ located verbatim in the source · abstract, characters 1639–1660 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Loss of OsDOF11 reduced nitrogen assimilation activity.

Gene
OsDOF11e1
Outcome
activity of nitrogen assimilatione0
Direction
lowe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“low activity of nitrogen assimilation”

✓ located verbatim in the source · abstract, characters 927–964 · show in text ↑
e1

“OsDOF11 in rice root.”

✓ located verbatim in the source · abstract, characters 1639–1660 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Loss of OsDOF11 lowered cytokinin and auxin content.

Gene
OsDOF11e1
Outcome
content of cytokinin and auxine0
Direction
lowe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“low content of cytokinin and auxin”

✓ located verbatim in the source · abstract, characters 969–1003 · show in text ↑
e1

“OsDOF11 in rice root.”

✓ located verbatim in the source · abstract, characters 1639–1660 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

OsWOX11 expression decreased in osdof11-1 and RNAi-9.

Material
osdof11-1e0
Gene
OsWOX11e0
Outcome
expression levele0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The expression level of WUSCHEL-related homeobox (OsWOX11), A-type response regulator 2 (OsRR2), OsRR3, and OsCKX4 were decreased in osdof11-1, as well as in OsDOF11 RNA interference 9 mutants (RNAi-9 lines)”

✓ located verbatim in the source · abstract, characters 1005–1212 · show in text ↑
e1

“OsDOF11 in rice root.”

✓ located verbatim in the source · abstract, characters 1639–1660 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

OsRR2 expression decreased in osdof11-1 and RNAi-9.

Material
osdof11-1e0
Gene
OsRR2e0
Outcome
expression levele0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The expression level of WUSCHEL-related homeobox (OsWOX11), A-type response regulator 2 (OsRR2), OsRR3, and OsCKX4 were decreased in osdof11-1, as well as in OsDOF11 RNA interference 9 mutants (RNAi-9 lines)”

✓ located verbatim in the source · abstract, characters 1005–1212 · show in text ↑
e1

“OsDOF11 in rice root.”

✓ located verbatim in the source · abstract, characters 1639–1660 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

OsRR3 expression decreased in osdof11-1 and RNAi-9.

Material
osdof11-1e0
Gene
OsRR3e0
Outcome
expression levele0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The expression level of WUSCHEL-related homeobox (OsWOX11), A-type response regulator 2 (OsRR2), OsRR3, and OsCKX4 were decreased in osdof11-1, as well as in OsDOF11 RNA interference 9 mutants (RNAi-9 lines)”

✓ located verbatim in the source · abstract, characters 1005–1212 · show in text ↑
e1

“OsDOF11 in rice root.”

✓ located verbatim in the source · abstract, characters 1639–1660 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

OsCKX4 expression decreased in osdof11-1 and RNAi-9.

Material
osdof11-1e0
Gene
OsCKX4e0
Outcome
expression levele0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The expression level of WUSCHEL-related homeobox (OsWOX11), A-type response regulator 2 (OsRR2), OsRR3, and OsCKX4 were decreased in osdof11-1, as well as in OsDOF11 RNA interference 9 mutants (RNAi-9 lines)”

✓ located verbatim in the source · abstract, characters 1005–1212 · show in text ↑
e1

“OsDOF11 in rice root.”

✓ located verbatim in the source · abstract, characters 1639–1660 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Cytokinin restored osdof11-1 crown root number as concentration rose from 1 to 10 μM.

Material
osdof11-1e0
Treatment
cytokinine0
Outcome
crown roots numbere0
Direction
rescuede0
Value
10 μMe0
Comparator
1 μMe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“crown roots number of osdof11-1 plants were rescued as the cytokinin concentration increased gradually from 1 μM to 10 μM”

✓ located verbatim in the source · abstract, characters 1370–1491 · show in text ↑
e1

“OsDOF11 in rice root.”

✓ located verbatim in the source · abstract, characters 1639–1660 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Cytokinin inhibited sucrose uptake activity in rice roots.

Organ / stage
roote0
Treatment
cytokinine0
Gene
OsDOF11e0
Outcome
sucrose uptake activitye0
Direction
inhibitede0
Comparator
Murashige-Skoog medium with 3.0% sucrose (MS30)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“cytokinin inhibited sucrose uptake activity from Murashige-Skoog medium with 3.0% sucrose (MS30) by OsDOF11 in rice root”

✓ located verbatim in the source · abstract, characters 1539–1659 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors conclude OsDOF11 promotes crown root formation via cytokinin.

Taxon
oryza sativaOryza sativae0
Gene
OsDOF11e0
Compound
cytokinine0
Outcome
crown root formatione0
Direction
promotese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsDOF11 promotes crown root formation via cytokinin in oryza sativa”

✓ located verbatim in the source · abstract, characters 1674–1741 · show in text ↑

class · nutrient: content · Oryza sativa (rice)Positive and negative results

5 papers: 3 positive, 2 negative or no effect

1 paper in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

class · molecular: metabolites · Oryza sativa (rice)Positive and negative results

16 papers: 14 positive, 2 negative or no effect

13 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. negative
  3. positive

12 papers more in this group

See all 16 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.