Paper · 2022 · Agriculture

Morpho-Physiological and Stress-Related Gene Expression of Rice Varieties in Response to Salinity Stress at Early Vegetative Stage

Tasneem Shakri; Muhammad Hafiz Che-Othman; Nurulhikma Md Isa; et al.

9
claims
27
verbatim quotes
19
citations
3
research areas
✓
Open access · cc-by

Abstract

This study focuses on the growth and morpho-physiological responses of the Malaysian commercial variety MR219 rice to salinity stress during the early vegetative stages, specifically during germination and the five-leaf stage. For germination responses, MR219 seeds were grown for 10 days in different salt concentrations. Low salinity significantly improves seed germination and increases the total number of germinated seeds. However, higher salinity (160 mM NaCl) inhibits the germination of MR219 seeds and reduces the total number of germinated seeds by 93.3%. The effects of salinity on the five-leaf stage of MR219 were also determined and compared to the salinity-tolerant (Pokkali) and susceptible (IR64) varieties. There were significant reductions in the photosynthesis rate, transpiration rate, stomatal conductance, and leaf chlorophyll content by 28.1%, 58.6%, 81.1%, and 3.7%, respectively. These reductions could contribute to the significant decrease in growth parameters measured throughout the treatment period. Based on the principal component analysis (PCA) result, MR219 is more tolerant to salinity than IR64, but is less tolerant than Pokkali. Further investigation on stress-related gene expression suggests that significant changes in the transcript level of genes involved in gamma-aminobutyric acid (GABA) shunt, ion transport, and reactive oxygen species detoxification could be attributed to the adaptation and tolerance level of each variety to salinity stress.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Low salinity significantly improved MR219 germination and increased the number of germinated seeds.

Material
MR219e1
Treatment
Low salinitye0
Outcome
seed germination and increases the total number of germinated seedse0
Direction
improvese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Low salinity significantly improves seed germination and increases the total number of germinated seeds.”

✓ located verbatim in the source · abstract, characters 323–427 · show in text ↑
t0

“Rice Varieties in Response to Salinity Stress”

✓ located verbatim in the source · title, characters 59–104 · show in text ↑
e1

“Malaysian commercial variety MR219 rice to salinity stress”

✓ located verbatim in the source · abstract, characters 75–133 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

At 160 mM NaCl, MR219 had 93.3% fewer germinated seeds.

Material
MR219e0
Treatment
higher salinity (160 mM NaCl)e0
Outcome
total number of germinated seedse0
Direction
reducese0
Value
93.3%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“higher salinity (160 mM NaCl) inhibits the germination of MR219 seeds and reduces the total number of germinated seeds by 93.3%.”

✓ located verbatim in the source · abstract, characters 437–565 · show in text ↑
t0

“Rice Varieties in Response to Salinity Stress”

✓ located verbatim in the source · title, characters 59–104 · show in text ↑
e1

“Malaysian commercial variety MR219 rice to salinity stress”

✓ located verbatim in the source · abstract, characters 75–133 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Salinity reduced photosynthesis rate by 28.1%.

Treatment
salinityt0
Outcome
photosynthesis ratee0
Direction
reductionse0
Value
28.1%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“There were significant reductions in the photosynthesis rate, transpiration rate, stomatal conductance, and leaf chlorophyll content by 28.1%, 58.6%, 81.1%, and 3.7%, respectively.”

✓ located verbatim in the source · abstract, characters 725–905 · show in text ↑
t0

“Rice Varieties in Response to Salinity Stress”

✓ located verbatim in the source · title, characters 59–104 · show in text ↑
e1

“Malaysian commercial variety MR219 rice to salinity stress”

✓ located verbatim in the source · abstract, characters 75–133 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Salinity reduced transpiration rate by 58.6%.

Treatment
salinityt0
Outcome
transpiration ratee0
Direction
reductionse0
Value
58.6%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“There were significant reductions in the photosynthesis rate, transpiration rate, stomatal conductance, and leaf chlorophyll content by 28.1%, 58.6%, 81.1%, and 3.7%, respectively.”

✓ located verbatim in the source · abstract, characters 725–905 · show in text ↑
t0

“Rice Varieties in Response to Salinity Stress”

✓ located verbatim in the source · title, characters 59–104 · show in text ↑
e1

“Malaysian commercial variety MR219 rice to salinity stress”

✓ located verbatim in the source · abstract, characters 75–133 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Salinity reduced stomatal conductance by 81.1%.

Treatment
salinityt0
Outcome
stomatal conductancee0
Direction
reductionse0
Value
81.1%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“There were significant reductions in the photosynthesis rate, transpiration rate, stomatal conductance, and leaf chlorophyll content by 28.1%, 58.6%, 81.1%, and 3.7%, respectively.”

✓ located verbatim in the source · abstract, characters 725–905 · show in text ↑
t0

“Rice Varieties in Response to Salinity Stress”

✓ located verbatim in the source · title, characters 59–104 · show in text ↑
e1

“Malaysian commercial variety MR219 rice to salinity stress”

✓ located verbatim in the source · abstract, characters 75–133 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Salinity reduced leaf chlorophyll content by 3.7%.

Treatment
salinityt0
Outcome
leaf chlorophyll contente0
Direction
reductionse0
Value
3.7%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“There were significant reductions in the photosynthesis rate, transpiration rate, stomatal conductance, and leaf chlorophyll content by 28.1%, 58.6%, 81.1%, and 3.7%, respectively.”

✓ located verbatim in the source · abstract, characters 725–905 · show in text ↑
t0

“Rice Varieties in Response to Salinity Stress”

✓ located verbatim in the source · title, characters 59–104 · show in text ↑
e1

“Malaysian commercial variety MR219 rice to salinity stress”

✓ located verbatim in the source · abstract, characters 75–133 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

The physiological reductions could contribute to decreased growth parameters.

Outcome
growth parameterse0
Direction
decreasee0
Qualifier
These reductionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“These reductions could contribute to the significant decrease in growth parameters measured throughout the treatment period.”

✓ located verbatim in the source · abstract, characters 906–1030 · show in text ↑
t0

“Rice Varieties in Response to Salinity Stress”

✓ located verbatim in the source · title, characters 59–104 · show in text ↑
e1

“Malaysian commercial variety MR219 rice to salinity stress”

✓ located verbatim in the source · abstract, characters 75–133 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

PCA placed MR219 above IR64 but below Pokkali for salinity tolerance.

Material
MR219e0
Outcome
more tolerant to salinity than IR64, but is less tolerant than Pokkalie0
Comparator
IR64e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Based on the principal component analysis (PCA) result, MR219 is more tolerant to salinity than IR64, but is less tolerant than Pokkali.”

✓ located verbatim in the source · abstract, characters 1031–1167 · show in text ↑
t0

“Rice Varieties in Response to Salinity Stress”

✓ located verbatim in the source · title, characters 59–104 · show in text ↑
e1

“Malaysian commercial variety MR219 rice to salinity stress”

✓ located verbatim in the source · abstract, characters 75–133 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Stress-related transcript levels changed significantly across rice varieties.

Gene
genes involved in gamma-aminobutyric acid (GABA) shunt, ion transport, and reactive oxygen species detoxificatione0
Outcome
transcript levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“significant changes in the transcript level of genes involved in gamma-aminobutyric acid (GABA) shunt, ion transport, and reactive oxygen species detoxification could be attributed to the adaptation and tolerance level of each variety to salinity stress.”

✓ located verbatim in the source · abstract, characters 1238–1492 · show in text ↑
t0

“Rice Varieties in Response to Salinity Stress”

✓ located verbatim in the source · title, characters 59–104 · show in text ↑
e1

“Malaysian commercial variety MR219 rice to salinity stress”

✓ located verbatim in the source · abstract, characters 75–133 · show in text ↑

sodium chloride · growth · Oryza sativa (rice)Results differ

128 papers: 28 positive, 100 negative or no effect

99 papers in the same direction as this paper · 28 in the opposite direction

  1. positive
  2. negative
  3. negative

124 papers more in this group

See all 128 papers →

salinity · physiology: gas exchange · Oryza sativa (rice)Results differ

14 papers: 2 positive, 12 negative or no effect

11 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. positive
  3. negative

10 papers more in this group

See all 14 papers →

salinity · physiology: photosynthesis · Oryza sativa (rice)Results differ

69 papers: 6 positive, 63 negative or no effect

62 papers in the same direction as this paper · 6 in the opposite direction

  1. negative
  2. negative
  3. positive

65 papers more in this group

See all 69 papers →

salinity · physiology: pigments · Oryza sativa (rice)Positive and negative results

74 papers: 12 positive, 62 negative or no effect

61 papers in the same direction as this paper · 12 in the opposite direction

  1. negative
  2. positive
  3. positive

70 papers more in this group

See all 74 papers →

salinity · growth · Oryza sativa (rice)Positive and negative results

296 papers: 37 positive, 259 negative or no effect

36 papers in the same direction as this paper · 259 in the opposite direction

  1. negative
  2. negative
  3. positive

292 papers more in this group

See all 296 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.