Paper · 2020 · International Journal of Molecular Sciences

γ-Aminobutyric Acid Suppresses Iron Transportation from Roots to Shoots in Rice Seedlings by Inducing Aerenchyma Formation

Changhua Zhu; Qi Qi; Huijiao Niu; et al.

9
claims
18
verbatim quotes
12
citations
3
research areas
✓
Open access · cc-by

Abstract

γ-Aminobutyric acid (GABA) is a widely distributed non-protein amino acid mediated the regulation of nitrate uptake and Al3+ tolerance in plants. However, there are few reports about the involvement of GABA in the regulation of iron (Fe) acquisition and translocation. Here, we show that GABA regulates Fe homeostasis in rice seedlings. Exogenous GABA decreased the chlorophyll concentration in leaves, with or without Fe supply. Over-expression of glutamate decarboxylase (GAD) gene, coding a crucial enzyme of GABA production, elevated endogenous GABA content and caused more leaf chlorosis than wild type (Nipponbare). GABA inhibited Fe transportation from roots to shoots and GABA application elevated the expression levels of Fe deficiency (FD)-related genes under conditions of Fe-sufficiency (FS), suggesting that GABA is a regulator of Fe translocation. Using Perls’ blue staining, we found that more ferric iron (Fe3+) was deposited in the epidermal cells of roots treated with GABA compared with control roots. Anatomic section analysis showed that GABA treatment induced more aerenchyma formation compared with the control. Aerenchyma facilitated the oxidization of soluble ferrous iron (Fe2+) into insoluble Fe3+, resulted in Fe precipitation in the epidermis, and inhibited the transportation of Fe from roots to shoots.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Exogenous GABA decreased chlorophyll concentration in rice leaves, with or without Fe supply.

Taxon
rice seedlingsOryza sativae6
Treatment
Exogenous GABAe0
Outcome
chlorophyll concentration in leavese0
Direction
decreasede0
Qualifier
with or without Fe supplye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Exogenous GABA decreased the chlorophyll concentration in leaves, with or without Fe supply”

✓ located verbatim in the source · abstract, characters 337–428 · show in text ↑
e6

“Here, we show that GABA regulates Fe homeostasis in rice seedlings”

✓ located verbatim in the source · abstract, characters 269–335 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Over-expression of the glutamate decarboxylase (GAD) gene elevated endogenous GABA content in rice compared with wild type Nipponbare.

Taxon
rice seedlingsOryza sativae6
Treatment
Over-expression of glutamate decarboxylase (GAD) genee1
Gene
glutamate decarboxylase (GAD)e1
Outcome
endogenous GABA contente1
Direction
elevatede1
Comparator
wild type (Nipponbare)e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“Over-expression of glutamate decarboxylase (GAD) gene, coding a crucial enzyme of GABA production, elevated endogenous GABA content and caused more leaf chlorosis than wild type (Nipponbare)”

✓ located verbatim in the source · abstract, characters 430–620 · show in text ↑
e6

“Here, we show that GABA regulates Fe homeostasis in rice seedlings”

✓ located verbatim in the source · abstract, characters 269–335 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Over-expression of the glutamate decarboxylase (GAD) gene caused more leaf chlorosis than wild type Nipponbare.

Taxon
rice seedlingsOryza sativae6
Treatment
Over-expression of glutamate decarboxylase (GAD) genee1
Gene
glutamate decarboxylase (GAD)e1
Outcome
leaf chlorosise1
Direction
moree1
Comparator
wild type (Nipponbare)e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“Over-expression of glutamate decarboxylase (GAD) gene, coding a crucial enzyme of GABA production, elevated endogenous GABA content and caused more leaf chlorosis than wild type (Nipponbare)”

✓ located verbatim in the source · abstract, characters 430–620 · show in text ↑
e6

“Here, we show that GABA regulates Fe homeostasis in rice seedlings”

✓ located verbatim in the source · abstract, characters 269–335 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

GABA inhibited iron transportation from roots to shoots in rice seedlings.

Taxon
rice seedlingsOryza sativae6
Treatment
GABAe2
Outcome
Fe transportation from roots to shootse2
Direction
inhibitede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e2

“GABA inhibited Fe transportation from roots to shoots and GABA application elevated the expression levels of Fe deficiency (FD)-related genes under conditions of Fe-sufficiency (FS)”

✓ located verbatim in the source · abstract, characters 622–803 · show in text ↑
e6

“Here, we show that GABA regulates Fe homeostasis in rice seedlings”

✓ located verbatim in the source · abstract, characters 269–335 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

GABA application elevated expression of Fe deficiency-related genes under Fe-sufficient conditions.

Taxon
rice seedlingsOryza sativae6
Treatment
GABA applicatione2
Outcome
expression levels of Fe deficiency (FD)-related genese2
Direction
elevatede2
Qualifier
under conditions of Fe-sufficiency (FS)e2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e2

“GABA inhibited Fe transportation from roots to shoots and GABA application elevated the expression levels of Fe deficiency (FD)-related genes under conditions of Fe-sufficiency (FS)”

✓ located verbatim in the source · abstract, characters 622–803 · show in text ↑
e6

“Here, we show that GABA regulates Fe homeostasis in rice seedlings”

✓ located verbatim in the source · abstract, characters 269–335 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

GABA treatment led to more ferric iron deposition in the epidermal cells of roots than control roots.

Taxon
rice seedlingsOryza sativae6
Organ / stage
epidermal cells of rootse4
Treatment
GABAe4
Outcome
ferric iron (Fe3+)e4
Direction
moree4
Comparator
control rootse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e4

“more ferric iron (Fe3+) was deposited in the epidermal cells of roots treated with GABA compared with control roots”

✓ located verbatim in the source · abstract, characters 904–1019 · show in text ↑
e6

“Here, we show that GABA regulates Fe homeostasis in rice seedlings”

✓ located verbatim in the source · abstract, characters 269–335 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

GABA treatment induced more aerenchyma formation than the control in rice seedlings.

Taxon
rice seedlingsOryza sativae6
Treatment
GABA treatmente3
Outcome
aerenchyma formatione3
Direction
moree3
Comparator
controle3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e3

“GABA treatment induced more aerenchyma formation compared with the control”

✓ located verbatim in the source · abstract, characters 1059–1133 · show in text ↑
e6

“Here, we show that GABA regulates Fe homeostasis in rice seedlings”

✓ located verbatim in the source · abstract, characters 269–335 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Aerenchyma facilitated the oxidation of soluble ferrous iron into insoluble Fe3+ in rice roots.

Taxon
rice seedlingsOryza sativae6
Organ / stage
Aerenchymae5
Compound
ferrous iron (Fe2+)e5
Outcome
oxidization of soluble ferrous iron (Fe2+) into insoluble Fe3+e5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e5

“Aerenchyma facilitated the oxidization of soluble ferrous iron (Fe2+) into insoluble Fe3+, resulted in Fe precipitation in the epidermis, and inhibited the transportation of Fe from roots to shoots”

✓ located verbatim in the source · abstract, characters 1135–1332 · show in text ↑
e6

“Here, we show that GABA regulates Fe homeostasis in rice seedlings”

✓ located verbatim in the source · abstract, characters 269–335 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Aerenchyma resulted in iron precipitation in the root epidermis and inhibited iron transportation from roots to shoots.

Taxon
rice seedlingsOryza sativae6
Outcome
transportation of Fe from roots to shootse5
Direction
inhibitede5
Qualifier
resulted in Fe precipitation in the epidermise5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e5

“Aerenchyma facilitated the oxidization of soluble ferrous iron (Fe2+) into insoluble Fe3+, resulted in Fe precipitation in the epidermis, and inhibited the transportation of Fe from roots to shoots”

✓ located verbatim in the source · abstract, characters 1135–1332 · show in text ↑
e6

“Here, we show that GABA regulates Fe homeostasis in rice seedlings”

✓ located verbatim in the source · abstract, characters 269–335 · show in text ↑

gamma-aminobutyric acid · physiology: pigments · Oryza sativa (rice)Results differ

5 papers: 4 positive, 1 negative or no effect

4 in the opposite direction

  1. positive
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.