Paper · 2020 · PLoS ONE

Biosynthetic pathway of indole-3-acetic acid in ectomycorrhizal fungi collected from northern Thailand

Jaturong Kumla; Nakarin Suwannarach; Kenji Matsui; et al.

6
claims
10
verbatim quotes
51
citations
2
research areas
✓
Open access · cc-by

Abstract

Indole-3-acetic acid (IAA) is an imperative phytohormone for plant growth and development. Ectomycorrhizal fungi (ECM) are able to produce IAA. However, only a few studies on IAA biosynthesis pathways in ECM fungi have been reported. This study aimed to investigate the IAA biosynthesis pathway of six ECM cultures including Astraeus odoratus, Gyrodon suthepensis, Phlebopus portentosus, Pisolithus albus, Pisolithus orientalis and Scleroderma suthepense. The results showed that all ECM fungi produced IAA in liquid medium that had been supplemented with L-tryptophan. Notably, fungal IAA levels vary for different fungal species. The detection of indole-3-lactic acid and indole-3-ethanol in the crude culture extracts of all ECM fungi indicated an enzymatic reduction of indole-3-pyruvic acid and indole-3-acetaldehyde, respectively in the IAA biosynthesis via the indole-3-pyruvic acid pathway. Moreover, the tryptophan aminotransferase activity confirmed that all ECM fungi synthesize IAA through the indole-3-pyruvic acid pathway. Additionally, the elongation of rice and oat coleoptiles was stimulated by crude culture extract. This is the first report of the biosynthesis pathway of IAA in the tested ECM fungi.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

All tested ectomycorrhizal fungi produced IAA in tryptophan-supplemented medium.

Interactor
ECM fungie0symbiont
Outcome
ECM fungi produced IAAe0
Setting
liquid mediume0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“all ECM fungi produced IAA in liquid medium that had been supplemented with L-tryptophan”

✓ located verbatim in the source · abstract, characters 480–568 · show in text ↑
t0

“rice”

✓ located verbatim in the source · abstract, characters 1069–1073 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Fungal IAA levels varied among species.

Interactor
fungal speciese0symbiont
Outcome
fungal IAA levelse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“fungal IAA levels vary for different fungal species”

✓ located verbatim in the source · abstract, characters 579–630 · show in text ↑
t0

“rice”

✓ located verbatim in the source · abstract, characters 1069–1073 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Detection of indole-3-lactic acid and indole-3-ethanol supported fungal IAA synthesis through the indole-3-pyruvic acid pathway.

Interactor
ECM fungie0symbiont
Outcome
IAA biosynthesis via the indole-3-pyruvic acid pathwaye0
Qualifier
enzymatic reduction of indole-3-pyruvic acid and indole-3-acetaldehydee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The detection of indole-3-lactic acid and indole-3-ethanol in the crude culture extracts of all ECM fungi indicated an enzymatic reduction of indole-3-pyruvic acid and indole-3-acetaldehyde, respectively in the IAA biosynthesis via the indole-3-pyruvic acid pathway”

✓ located verbatim in the source · abstract, characters 632–897 · show in text ↑
t0

“rice”

✓ located verbatim in the source · abstract, characters 1069–1073 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Tryptophan aminotransferase activity supported IAA synthesis through the indole-3-pyruvic acid pathway in all tested fungi.

Interactor
ECM fungie0symbiont
Gene
tryptophan aminotransferasee0
Outcome
ECM fungi synthesize IAA through the indole-3-pyruvic acid pathwaye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the tryptophan aminotransferase activity confirmed that all ECM fungi synthesize IAA through the indole-3-pyruvic acid pathway”

✓ located verbatim in the source · abstract, characters 909–1035 · show in text ↑
t0

“rice”

✓ located verbatim in the source · abstract, characters 1069–1073 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Fungal crude culture extract stimulated rice coleoptile elongation.

Treatment
crude culture extracte0
Outcome
elongation of rice and oat coleoptilese0
Direction
stimulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“elongation of rice and oat coleoptiles was stimulated by crude culture extract”

✓ located verbatim in the source · abstract, characters 1055–1133 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Fungal crude culture extract stimulated oat coleoptile elongation.

Treatment
crude culture extracte0
Outcome
elongation of rice and oat coleoptilese0
Direction
stimulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Avena sativa
Avena sativa · TaxonSendelbach ( talk ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“elongation of rice and oat coleoptiles was stimulated by crude culture extract”

✓ located verbatim in the source · abstract, characters 1055–1133 · show in text ↑

botanical · growth · Avena sativa (oats)Positive and negative results

22 papers: 15 positive, 7 negative or no effect

14 papers in the same direction as this paper · 7 in the opposite direction

  1. negative
  2. negative
  3. negative

18 papers more in this group

See all 22 papers →

botanical · growth · Oryza sativa (rice)Positive and negative results

211 papers: 133 positive, 78 negative or no effect

132 papers in the same direction as this paper · 78 in the opposite direction

  1. negative
  2. negative
  3. negative

207 papers more in this group

See all 211 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.