Paper · 2019 · Current Biology

Short- and Long-Term Effects of UVA on Arabidopsis Are Mediated by a Novel cGMP Phosphodiesterase

Jean-Charles Isner; Vlad-Aris Olteanu; Alexander J. Hetherington; et al.

9
claims
16
verbatim quotes
39
citations
2
research areas
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Open access · cc-by

Abstract

Although UVA radiation (315-400 nm) represents 95% of the UV radiation reaching the earth's surface, surprisingly little is known about its effects on plants [1]. We show that in Arabidopsis, short-term exposure to UVA inhibits the opening of stomata, and this requires a reduction in the cytosolic level of cGMP. This process is independent of UVR8, the UVB receptor. A cGMP-activated phosphodiesterase (AtCN-PDE1) was responsible for the UVA-induced decrease in cGMP in Arabidopsis. AtCN-PDE1-like proteins form a clade within the large HD-domain/PDEase-like protein superfamily, but no eukaryotic members of this subfamily have been functionally characterized. These genes have been lost from the genomes of metazoans but are otherwise conserved as single-copy genes across the tree of life. In longer-term experiments, UVA radiation increased growth and decreased water-use efficiency. These experiments revealed that PDE1 is also a negative regulator of growth. As the PDE1 gene is ancient and not represented in animal lineages, it is likely that at least one element of cGMP signaling in plants has evolved differently to the system present in metazoans.

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Claims 9

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Short UVA exposure inhibits Arabidopsis stomatal opening.

Taxon
ArabidopsisArabidopsise0
Treatment
short-term exposure to UVAe0
Outcome
opening of stomatae0
Direction
inhibitse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“in Arabidopsis, short-term exposure to UVA inhibits the opening of stomata”

✓ located verbatim in the source · abstract, characters 176–250 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Short UVA inhibition of stomatal opening requires reduced cytosolic cGMP.

Taxon
ArabidopsisArabidopsist0
Compound
cGMPe0
Outcome
reduction in the cytosolic level of cGMPe0
Qualifier
requirese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“this requires a reduction in the cytosolic level of cGMP”

✓ located verbatim in the source · abstract, characters 256–312 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 39–50 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

The UVA stomatal process is independent of UVR8.

Taxon
ArabidopsisArabidopsist0
Gene
UVR8e0
Outcome
independent of UVR8e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This process is independent of UVR8, the UVB receptor”

✓ located verbatim in the source · abstract, characters 314–367 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 39–50 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

AtCN-PDE1 causes the UVA-associated cGMP decrease in Arabidopsis.

Taxon
ArabidopsisArabidopsise0
Gene
AtCN-PDE1e0
Compound
cGMPe0
Outcome
UVA-induced decrease in cGMPe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A cGMP-activated phosphodiesterase (AtCN-PDE1) was responsible for the UVA-induced decrease in cGMP in Arabidopsis”

✓ located verbatim in the source · abstract, characters 369–483 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AtCN-PDE1-like proteins form a clade within the HD-domain/PDEase-like superfamily.

Taxon
ArabidopsisArabidopsist0
Gene
AtCN-PDE1-like proteinse0
Outcome
form a clade within the large HD-domain/PDEase-like protein superfamilye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AtCN-PDE1-like proteins form a clade within the large HD-domain/PDEase-like protein superfamily”

✓ located verbatim in the source · abstract, characters 485–580 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 39–50 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

These genes are absent from metazoan genomes and otherwise conserved as single-copy genes across life.

Taxon
ArabidopsisArabidopsist0
Outcome
lost from the genomes of metazoans but are otherwise conserved as single-copy genes across the tree of lifee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“These genes have been lost from the genomes of metazoans but are otherwise conserved as single-copy genes across the tree of life”

✓ located verbatim in the source · abstract, characters 664–793 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 39–50 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Longer UVA exposure increased growth.

Taxon
ArabidopsisArabidopsist0
Treatment
UVA radiatione0
Outcome
growthe0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“UVA radiation increased growth”

✓ located verbatim in the source · abstract, characters 823–853 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 39–50 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Longer UVA exposure decreased water-use efficiency.

Taxon
ArabidopsisArabidopsist0
Treatment
UVA radiatione0
Outcome
water-use efficiencye0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“UVA radiation increased growth and decreased water-use efficiency”

✓ located verbatim in the source · abstract, characters 823–888 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 39–50 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

PDE1 negatively regulates growth.

Taxon
ArabidopsisArabidopsist0
Gene
PDE1e0
Outcome
growthe0
Qualifier
negative regulatore0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“PDE1 is also a negative regulator of growth”

✓ located verbatim in the source · abstract, characters 922–965 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 39–50 · show in text ↑

uv · physiology: gas exchange · ArabidopsisPositive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

uv · growth · ArabidopsisPositive and negative results

11 papers: 4 positive, 7 negative or no effect

3 papers in the same direction as this paper · 7 in the opposite direction

  1. negative
  2. negative
  3. negative

7 papers more in this group

See all 11 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.