Paper · 2018 · Postharvest Biology and Technology

Integrated transcriptomic-metabolomic analysis reveals cellular responses of harvested strawberry fruit subjected to short-term exposure to high levels of carbon dioxide

Jeewon Bang; Sooyeon Lim; Gibum Yi; et al.

6
claims
14
verbatim quotes
57
citations
3
research areas
✓
Open access · cc-by-nc-nd

Abstract

Harvested strawberry ( Fragaria × ananassa ) fruit has a short shelf life due to rapid postharvest metabolism, quick softening, mechanical damage, and fungal decay. To improve the storability of strawberry fruit, we subjected harvested fruit to short-term exposure to 30% carbon dioxide (CO 2 ) and used transcriptomic and metabolomic analyses to identify the cellular responses induced by this treatment. Fruit was stored at 10 °C for 10 d after a 3-h exposure to 30% CO 2 (treatment) or ambient air (control) at 25 °C, respectively. The CO 2 treatment reduced fruit decay and softening compared to the control throughout the 10-d storage period. Transcriptomic analyses revealed that expression levels of genes encoding cell wall-degrading enzymes (expansin, pectinesterase, and β-xylosidase) decreased in response to the CO 2 treatment. Within 1 d after the CO 2 treatment, the expression levels of genes encoding heat-shock proteins significantly increased. Metabolite profiling revealed that glucose, quinic acid, and succinic acid increased in responses to the CO 2 treatment at 1 d. Transmission electron microscopy showed that disintegration of the middle lamella in the cell wall was inhibited by the CO 2 treatment. Polyuronide (insoluble pectin) content in cell walls was 30% higher, on average, in the treated fruit than those in the control fruit during the 10-d storage period. These results indicate that a short-term treatment with 30% CO 2 reduces the degradation of pectin in the cell wall by reducing the activity of cell wall-degrading enzymes and induces abiotic stress-response genes in harvested strawberry fruit. Our results improve our understanding of the molecular mechanisms behind CO 2 -responsive genes in strawberry fruit and provide insight into ways to improve the postharvest quality of strawberries.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc-nd. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The CO 2 treatment reduced fruit decay and softening compared with the control throughout 10 d of storage.

Taxon
Fragaria × ananassaFragaria ×ananassae0
Organ / stage
fruite0
Treatment
30% carbon dioxidee1
Outcome
fruit decay and softeninge2
Direction
reducede2
Qualifier
throughout the 10-d storage periode2
Comparator
controle2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Harvested strawberry ( Fragaria × ananassa ) fruit”

✓ located verbatim in the source · abstract, characters 0–50 · show in text ↑
e1

“short-term exposure to 30% carbon dioxide”

✓ located verbatim in the source · abstract, characters 245–286 · show in text ↑
e2

“The CO 2 treatment reduced fruit decay and softening compared to the control throughout the 10-d storage period”

✓ located verbatim in the source · abstract, characters 535–646 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Glucose, quinic acid and succinic acid increased in fruit after the CO 2 treatment at 1 d.

Taxon
Fragaria × ananassaFragaria ×ananassae0
Treatment
CO 2 treatmente3
Outcome
glucose, quinic acid, and succinic acide3
Direction
increasede3
Qualifier
at 1 de3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Harvested strawberry ( Fragaria × ananassa ) fruit”

✓ located verbatim in the source · abstract, characters 0–50 · show in text ↑
e3

“Metabolite profiling revealed that glucose, quinic acid, and succinic acid increased in responses to the CO 2 treatment at 1 d”

✓ located verbatim in the source · abstract, characters 962–1088 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Expression of genes encoding cell wall-degrading enzymes (expansin, pectinesterase, beta-xylosidase) decreased after the CO 2 treatment.

Taxon
Fragaria × ananassaFragaria ×ananassae0
Treatment
CO 2 treatmente4
Gene
expansin, pectinesterase, and β-xylosidasee4
Outcome
expression levels of genes encoding cell wall-degrading enzymese4
Direction
decreasede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Harvested strawberry ( Fragaria × ananassa ) fruit”

✓ located verbatim in the source · abstract, characters 0–50 · show in text ↑
e4

“expression levels of genes encoding cell wall-degrading enzymes (expansin, pectinesterase, and β-xylosidase) decreased in response to the CO 2 treatment”

✓ located verbatim in the source · abstract, characters 686–838 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Expression of genes encoding heat-shock proteins significantly increased within 1 d after the CO 2 treatment.

Taxon
Fragaria × ananassaFragaria ×ananassae0
Treatment
CO 2 treatmente5
Gene
heat-shock proteinse5
Outcome
expression levels of genes encoding heat-shock proteinse5
Direction
increasede5
Qualifier
Within 1 d after the CO 2 treatmente5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Harvested strawberry ( Fragaria × ananassa ) fruit”

✓ located verbatim in the source · abstract, characters 0–50 · show in text ↑
e5

“Within 1 d after the CO 2 treatment, the expression levels of genes encoding heat-shock proteins significantly increased”

✓ located verbatim in the source · abstract, characters 840–960 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Insoluble pectin (polyuronide) content in cell walls was 30% higher in CO2-treated fruit than in control fruit during storage.

Taxon
Fragaria × ananassaFragaria ×ananassae0
Organ / stage
cell wallse6
Treatment
30% carbon dioxidee1
Outcome
Polyuronide (insoluble pectin) content in cell wallse6
Direction
highere6
Value
30%e6
Qualifier
on averagee6
Comparator
control fruite6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Harvested strawberry ( Fragaria × ananassa ) fruit”

✓ located verbatim in the source · abstract, characters 0–50 · show in text ↑
e1

“short-term exposure to 30% carbon dioxide”

✓ located verbatim in the source · abstract, characters 245–286 · show in text ↑
e6

“Polyuronide (insoluble pectin) content in cell walls was 30% higher, on average, in the treated fruit than those in the control fruit during the 10-d storage period”

✓ located verbatim in the source · abstract, characters 1226–1390 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The CO 2 treatment inhibited disintegration of the middle lamella in the cell wall, as seen by transmission electron microscopy.

Taxon
Fragaria × ananassaFragaria ×ananassae0
Organ / stage
cell walle7
Treatment
CO 2 treatmente7
Outcome
disintegration of the middle lamella in the cell walle7
Direction
inhibitede7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Fragaria x ananassa
Fragaria ×ananassa · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Harvested strawberry ( Fragaria × ananassa ) fruit”

✓ located verbatim in the source · abstract, characters 0–50 · show in text ↑
e7

“Transmission electron microscopy showed that disintegration of the middle lamella in the cell wall was inhibited by the CO 2 treatment”

✓ located verbatim in the source · abstract, characters 1090–1224 · show in text ↑

co2 · molecular: metabolites · Fragaria x ananassa (strawberry)Results differ

24 papers: 20 positive, 4 negative or no effect

19 papers in the same direction as this paper · 4 in the opposite direction

  1. no effect
  2. positive
  3. negative

20 papers more in this group

See all 24 papers →

co2 · molecular: expression · Fragaria x ananassa (strawberry)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
See all 3 papers →

co2 · disease · Fragaria x ananassa (strawberry)Positive and negative results

18 papers: 17 positive, 1 negative or no effect

16 papers in the same direction as this paper · 1 in the opposite direction

  1. no effect
  2. positive
  3. positive

14 papers more in this group

See all 18 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.