Paper · 2018 · Phytopathology

Interaction of Brassicaceae Seed Meal Soil Amendment and Apple Rootstock Genotype on Microbiome Structure and Replant Disease Suppression

Likun Wang; Mark Mazzola

10
claims
20
verbatim quotes
29
citations
3
research areas
✓
Open access · public-domain

Abstract

Preplant soil application of a Brassica juncea–Sinapis alba seed meal formulation (SM) at a rate of 6.6 t ha −1 alters composition of the orchard soil microbiome in a manner that yields sustainable long-term suppression of soilborne pathogens in apple production systems. However, the cost of SM amendment has hindered the adoption of this tactic to manage apple replant disease in commercial orchards. Greenhouse trials were conducted to assess the effect of reduced SM application rates in concert with apple rootstock genotype on structure of the rhizosphere microbiome and associated disease control outcomes. At all application rates assessed, SM treatment increased tree growth and reduced disease development relative to the control. In general, total tree biomass and leader shoot length were similar in soils treated with SM at 4.4 or 6.6 t ha −1 regardless of rootstock genotype. Equivalent increase in tree biomass when cultivated in soil treated at the lowest and highest SM amendment rate was attained when used in conjunction with G.41 or G.210 apple rootstocks. Suppression of Pythium spp. or Pratylenchus penetrans root densities was similar at all SM application rates. When cultivated in nontreated replant orchard soil, Geneva rootstocks (G.41 and G.210) exhibited lower levels of Pythium spp. and P. penetrans root colonization relative to Malling rootstocks (M.9 and MM.106). For a given rootstock, structure of the rhizosphere microbiome was similar in soils treated with SM at 4.4 and 6.6 t ha −1 . G.41 and G.210 rootstocks but not M.9 or MM.106 cultivated in soil treated with SM at 2.2 t ha −1 possessed a rhizosphere bacterial community structure that differed significantly from the control. Findings indicate that effective control of apple replant disease may be attained at lower SM amendment rates than employed previously, with lower effective rates possible when integrated with tolerant rootstock genotypes such as G.41 or G.210.

Abstract from the paper’s OpenAlex record; open copy licensed public-domain. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seed meal increased tree growth at every tested rate.

Treatment
SM treatmente0
Outcome
tree growthe0
Direction
increasede0
Comparator
the controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Apple Rootstock”

✓ located verbatim in the source · title, characters 57–72 · show in text ↑
e0

“At all application rates assessed, SM treatment increased tree growth and reduced disease development relative to the control.”

✓ located verbatim in the source · abstract, characters 614–740 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seed meal reduced disease development at every tested rate.

Treatment
SM treatmente0
Outcome
disease developmente0
Direction
reducede0
Comparator
the controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Apple Rootstock”

✓ located verbatim in the source · title, characters 57–72 · show in text ↑
e0

“At all application rates assessed, SM treatment increased tree growth and reduced disease development relative to the control.”

✓ located verbatim in the source · abstract, characters 614–740 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Tree biomass and leader shoot length were generally similar at 4.4 and 6.6 t ha −1.

Treatment
SM at 4.4 or 6.6 t ha −1e0
Outcome
total tree biomass and leader shoot lengthe0
Direction
similare0
Comparator
4.4 or 6.6 t ha −1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Apple Rootstock”

✓ located verbatim in the source · title, characters 57–72 · show in text ↑
e0

“total tree biomass and leader shoot length were similar in soils treated with SM at 4.4 or 6.6 t ha −1 regardless of rootstock genotype.”

✓ located verbatim in the source · abstract, characters 753–889 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

G.41 and G.210 attained equivalent biomass increases at lowest and highest seed meal rates.

Material
G.41 or G.210e0
Treatment
SM amendmente0
Outcome
tree biomasse0
Direction
Equivalent increasee0
Comparator
lowest and highest SM amendment ratee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Apple Rootstock”

✓ located verbatim in the source · title, characters 57–72 · show in text ↑
e0

“Equivalent increase in tree biomass when cultivated in soil treated at the lowest and highest SM amendment rate was attained when used in conjunction with G.41 or G.210 apple rootstocks.”

✓ located verbatim in the source · abstract, characters 890–1076 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Pythium root densities were similarly suppressed across seed meal rates.

Treatment
SM application ratese0
Interactor
Pythium spp.Pythiume0pathogen
Outcome
root densitiese0
Direction
similare0
Comparator
all SM application ratese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Pythium
Pythium · Interactor · picture of the genus (one of its species)Doc. RNDr. Josef Reischig, CSc. · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Apple Rootstock”

✓ located verbatim in the source · title, characters 57–72 · show in text ↑
e0

“Suppression of Pythium spp. or Pratylenchus penetrans root densities was similar at all SM application rates.”

✓ located verbatim in the source · abstract, characters 1077–1186 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Pratylenchus root densities were similarly suppressed across seed meal rates.

Treatment
SM application ratese0
Interactor
Pratylenchus penetransPratylenchus penetranse0pathogen
Outcome
Pratylenchus penetrans root densitiese0
Direction
similare0
Comparator
all SM application ratese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Pratylenchus penetrans
Pratylenchus penetrans · InteractorUSDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

t0

“Apple Rootstock”

✓ located verbatim in the source · title, characters 57–72 · show in text ↑
e0

“Suppression of Pythium spp. or Pratylenchus penetrans root densities was similar at all SM application rates.”

✓ located verbatim in the source · abstract, characters 1077–1186 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Geneva rootstocks had lower Pythium colonization than Malling rootstocks in untreated soil.

Material
Geneva rootstockse0
Interactor
Pythium spp.Pythiume0pathogen
Outcome
root colonizatione0
Direction
lowere0
Comparator
Malling rootstockse0
Setting
replant orchard soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Pythium
Pythium · Interactor · picture of the genus (one of its species)Doc. RNDr. Josef Reischig, CSc. · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Apple Rootstock”

✓ located verbatim in the source · title, characters 57–72 · show in text ↑
e0

“When cultivated in nontreated replant orchard soil, Geneva rootstocks (G.41 and G.210) exhibited lower levels of Pythium spp. and P. penetrans root colonization relative to Malling rootstocks (M.9 and MM.106).”

✓ located verbatim in the source · abstract, characters 1187–1396 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Geneva rootstocks had lower P. penetrans colonization than Malling rootstocks in untreated soil.

Material
Geneva rootstockse0
Interactor
P. penetransPratylenchus penetranse0pathogen
Outcome
P. penetrans root colonizatione0
Direction
lowere0
Comparator
Malling rootstockse0
Setting
replant orchard soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗
Pratylenchus penetrans
Pratylenchus penetrans · InteractorUSDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

t0

“Apple Rootstock”

✓ located verbatim in the source · title, characters 57–72 · show in text ↑
e0

“When cultivated in nontreated replant orchard soil, Geneva rootstocks (G.41 and G.210) exhibited lower levels of Pythium spp. and P. penetrans root colonization relative to Malling rootstocks (M.9 and MM.106).”

✓ located verbatim in the source · abstract, characters 1187–1396 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Rhizosphere microbiome structure was similar at the two higher seed meal rates.

Treatment
SM at 4.4e0
Outcome
structure of the rhizosphere microbiomee0
Direction
similare0
Comparator
6.6 t ha −1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Apple Rootstock”

✓ located verbatim in the source · title, characters 57–72 · show in text ↑
e0

“For a given rootstock, structure of the rhizosphere microbiome was similar in soils treated with SM at 4.4 and 6.6 t ha −1 .”

✓ located verbatim in the source · abstract, characters 1397–1521 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Low seed meal treatment significantly changed bacterial community structure for G.41 and G.210, but not M.9 or MM.106.

Material
G.41 and G.210e0
Treatment
SM at 2.2 t ha −1e0
Outcome
rhizosphere bacterial community structuree0
Direction
differede0
Qualifier
but not M.9 or MM.106e0
Comparator
the controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Malus domestica
Malus domestica · TaxonW.carter · CC0 · Wikimedia Commons ↗

Verbatim

t0

“Apple Rootstock”

✓ located verbatim in the source · title, characters 57–72 · show in text ↑
e0

“G.41 and G.210 rootstocks but not M.9 or MM.106 cultivated in soil treated with SM at 2.2 t ha −1 possessed a rhizosphere bacterial community structure that differed significantly from the control.”

✓ located verbatim in the source · abstract, characters 1522–1719 · show in text ↑

other · growth · Malus domestica (apple)Positive and negative results

20 papers: 18 positive, 2 negative or no effect

17 papers in the same direction as this paper · 1 in the opposite direction · 1 reporting no difference from an alternative

  1. positive
  2. positive
  3. positive

16 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.