Paper · 2018 · Annals of Microbiology

Bacteria endemic to saline coastal belt and their ability to mitigate the effects of salt stress on rice growth and yields

Fahmida Sultana Rima; Sudip Biswas; Protup Kumer Sarker; et al.

13
claims
28
verbatim quotes
55
citations
4
research areas
✓
Open access

Abstract

Increase in soil salinity adversely affects the metabolism and lowers the yield of rice (Oryza sativa L). Application of plant growth-promoting rhizobacteria (PGPR) to ameliorate the effects of salt stress on sensitive rice can be both effective and sustainable. In this study, 20 bacterial strains were isolated from the soil of saline-prone regions of Satkhira, north of the Sundarbans in coastal Bangladesh. Three bacteria among these grew well in the presence of 3 M salt (NaCl) and were Gram positive and non-motile. Their 16S rRNA sequence revealed that they belong to the Halobacillus genus. Two of them were identified as Halobacillus dabanensis strain SB-26 and the other one as Halobacillus sp. GSP 34. A couple of mechanisms by which these microbes could play beneficial role if associated with plants, such as nitrogen fixation and indole acetic acid (IAA) production, were identified. The two bacterial strains showed positive results for nitrogen fixation and indole acetic acid (IAA) activity under salt stress. Their effect on the physiology and yield of a farmer popular but sensitive BRRI dhan 28 rice variety was investigated under both control and salt stress. At the seedling stage, inoculated plants had significantly greater root length, shoot height, total weight, chlorophyll content, but lower electrolyte leakage both in control and salt stress (0, 40, and 80 mM). Performance of the plants was even better when both bacteria were used in combination. At the reproductive stage, the plants also showed better phenology in presence of the inoculated bacteria. Under stress (50 mM NaCl), these plants showed significantly greater plant height, lower spikelet damage, and yield reduction compared to untreated plants. The identified Halobacillus strains can therefore be used to improve the yield of rice by exploiting their plant growth promotion activities in coastal areas affected by moderate salinity, such as those with an ionic conductivity of up to 5 dS m−1.

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Claims 13

Observationobservedoriginal resultmeasured

Claim · model-written summary

Three bacterial isolates tolerated 3 M NaCl and were Gram positive and non-motile.

Outcome
bacteria among these grew welle0
Value
3 M salt (NaCl)e0
Qualifier
Gram positive and non-motilee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Three bacteria among these grew well in the presence of 3 M salt (NaCl) and were Gram positive and non-motile.”

✓ located verbatim in the source · abstract, characters 411–521 · show in text ↑
e1

“yield of rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 74–104 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The bacterial isolates were assigned to Halobacillus; two were H. dabanensis SB-26 and one Halobacillus sp. GSP 34.

Outcome
Halobacillus genuse0
Qualifier
Halobacillus dabanensis strain SB-26 and the other one as Halobacillus sp. GSP 34e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Their 16S rRNA sequence revealed that they belong to the Halobacillus genus. Two of them were identified as Halobacillus dabanensis strain SB-26 and the other one as Halobacillus sp. GSP 34.”

✓ located verbatim in the source · abstract, characters 522–712 · show in text ↑
e1

“yield of rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 74–104 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The two bacterial strains showed nitrogen fixation under salt stress.

Outcome
nitrogen fixatione0
Qualifier
under salt stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The two bacterial strains showed positive results for nitrogen fixation and indole acetic acid (IAA) activity under salt stress.”

✓ located verbatim in the source · abstract, characters 898–1026 · show in text ↑
e1

“yield of rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 74–104 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The two bacterial strains showed indole acetic acid activity under salt stress.

Outcome
indole acetic acid (IAA) activitye0
Qualifier
under salt stresse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The two bacterial strains showed positive results for nitrogen fixation and indole acetic acid (IAA) activity under salt stress.”

✓ located verbatim in the source · abstract, characters 898–1026 · show in text ↑
e1

“yield of rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 74–104 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Inoculated rice seedlings had greater root length, shoot height and total weight under control and salt conditions.

Material
BRRI dhan 28e1
Organ / stage
seedling stagee0
Treatment
inoculatede0
Outcome
root length, shoot height, total weighte0
Direction
greatere0
Qualifier
salt stress (0, 40, and 80 mM)e0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“At the seedling stage, inoculated plants had significantly greater root length, shoot height, total weight, chlorophyll content, but lower electrolyte leakage both in control and salt stress (0, 40, and 80 mM).”

✓ located verbatim in the source · abstract, characters 1181–1391 · show in text ↑
e1

“BRRI dhan 28 rice variety was investigated”

✓ located verbatim in the source · abstract, characters 1102–1144 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Inoculated rice seedlings had greater chlorophyll content under control and salt conditions.

Material
BRRI dhan 28e1
Organ / stage
seedling stagee0
Treatment
inoculatede0
Outcome
chlorophyll contente0
Direction
greatere0
Qualifier
salt stress (0, 40, and 80 mM)e0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“At the seedling stage, inoculated plants had significantly greater root length, shoot height, total weight, chlorophyll content, but lower electrolyte leakage both in control and salt stress (0, 40, and 80 mM).”

✓ located verbatim in the source · abstract, characters 1181–1391 · show in text ↑
e1

“BRRI dhan 28 rice variety was investigated”

✓ located verbatim in the source · abstract, characters 1102–1144 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculated rice seedlings had lower electrolyte leakage under control and salt conditions.

Material
BRRI dhan 28e1
Organ / stage
seedling stagee0
Treatment
inoculatede0
Outcome
electrolyte leakagee0
Direction
lowere0
Qualifier
salt stress (0, 40, and 80 mM)e0
Comparator
controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“At the seedling stage, inoculated plants had significantly greater root length, shoot height, total weight, chlorophyll content, but lower electrolyte leakage both in control and salt stress (0, 40, and 80 mM).”

✓ located verbatim in the source · abstract, characters 1181–1391 · show in text ↑
e1

“BRRI dhan 28 rice variety was investigated”

✓ located verbatim in the source · abstract, characters 1102–1144 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Combining both bacteria gave better rice performance than separate use.

Treatment
both bacteria were used in combinatione0
Outcome
Performance of the plantse0
Direction
bettere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Performance of the plants was even better when both bacteria were used in combination.”

✓ located verbatim in the source · abstract, characters 1392–1478 · show in text ↑
e1

“BRRI dhan 28 rice variety was investigated”

✓ located verbatim in the source · abstract, characters 1102–1144 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculated rice showed better reproductive phenology.

Organ / stage
reproductive stagee0
Treatment
inoculated bacteriae0
Outcome
phenologye0
Direction
bettere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“At the reproductive stage, the plants also showed better phenology in presence of the inoculated bacteria.”

✓ located verbatim in the source · abstract, characters 1479–1585 · show in text ↑
e1

“BRRI dhan 28 rice variety was investigated”

✓ located verbatim in the source · abstract, characters 1102–1144 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Under 50 mM NaCl, inoculated rice had significantly greater plant height than untreated plants.

Treatment
inoculated bacteriae1
Outcome
plant heighte0
Direction
greatere0
Qualifier
50 mM NaCle0
Comparator
untreated plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Under stress (50 mM NaCl), these plants showed significantly greater plant height, lower spikelet damage, and yield reduction compared to untreated plants.”

✓ located verbatim in the source · abstract, characters 1586–1741 · show in text ↑
e1

“in presence of the inoculated bacteria.”

✓ located verbatim in the source · abstract, characters 1546–1585 · show in text ↑
e2

“BRRI dhan 28 rice variety was investigated”

✓ located verbatim in the source · abstract, characters 1102–1144 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Under 50 mM NaCl, inoculated rice had lower spikelet damage than untreated plants.

Treatment
inoculated bacteriae1
Outcome
spikelet damagee0
Direction
lowere0
Qualifier
50 mM NaCle0
Comparator
untreated plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Under stress (50 mM NaCl), these plants showed significantly greater plant height, lower spikelet damage, and yield reduction compared to untreated plants.”

✓ located verbatim in the source · abstract, characters 1586–1741 · show in text ↑
e1

“in presence of the inoculated bacteria.”

✓ located verbatim in the source · abstract, characters 1546–1585 · show in text ↑
e2

“BRRI dhan 28 rice variety was investigated”

✓ located verbatim in the source · abstract, characters 1102–1144 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Under 50 mM NaCl, inoculated rice showed reduced yield loss compared with untreated plants.

Treatment
inoculated bacteriae1
Outcome
yield reductione0
Qualifier
50 mM NaCle0
Comparator
untreated plantse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Under stress (50 mM NaCl), these plants showed significantly greater plant height, lower spikelet damage, and yield reduction compared to untreated plants.”

✓ located verbatim in the source · abstract, characters 1586–1741 · show in text ↑
e1

“in presence of the inoculated bacteria.”

✓ located verbatim in the source · abstract, characters 1546–1585 · show in text ↑
e2

“BRRI dhan 28 rice variety was investigated”

✓ located verbatim in the source · abstract, characters 1102–1144 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors propose using the Halobacillus strains to improve rice yield in moderately saline coastal areas.

Interactor
HalobacillusHalobacilluse0symbiont
Outcome
improve the yield of ricee0
Qualifier
ionic conductivity of up to 5 dS m−1e0
Setting
coastal arease0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The identified Halobacillus strains can therefore be used to improve the yield of rice by exploiting their plant growth promotion activities in coastal areas affected by moderate salinity, such as those with an ionic conductivity of up to 5 dS m−1.”

✓ located verbatim in the source · abstract, characters 1742–1990 · show in text ↑

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.