Paper · 2016 · Biotechnology & Biotechnological Equipment

Cloning and expression analysis of the Hsp70 geneZmERD2inZea mays

Jinhui Song; Qiaoyun Weng; Hailian Ma; et al.

13
claims
28
verbatim quotes
16
citations
1
research areas
✓
Open access · cc-by-nc-nd

Abstract

In this study, an Hsp70 gene was isolated from maize and was designated as ZmERD2 (Early Responsive to Dehydration 2). The full cDNA sequence of ZmERD2 was 2375 bp. It includes a 1949 bp open reading frame (ORF) encoding 649 amino acids. The calculated molecular mass was 71.163 kDa. The protein encoded by ZmERD2 contains an Hsp70 conservative structure domain, three typical Hsp70 family signature sequences and a cytosolic Hsp70-specific motif, which belongs to the Hsp70 family. Phylogenetic tree analysis suggested that ZmEDR2 shares high similarity (92%–95%) with Hsp70 of other plants, such as Arabidopsis thaliana (NP 195870), Triticum urartu (EMS52605), Aegilops tauschii (EMT07406) and Nicotiana tabacum (AAR17080), and was clustered together with T. urartu and A. tauschii. The promoter of ZmERD2, which was located at about 2.2 kb upstream of ZmERD2, was cloned and was predicted to contain important regulatory elements, including TATA-box, CAAT-box and drought-, heat-, cold-, salicylic acid- and methyl jasmonate-responsive elements. Analyzed by quantitative real-time polymerase chain reaction, the expression of ZmERD2 in maize was induced by heat, high-salt, cold, polyethylene glycol, heat stress and dehydration treatments, but not by abscisic acid. The expression of ZmEDR2 was quickly induced at 42 °C and reached its peak after 1 h of heat stress, with an expression of 40-fold above the control level. These results suggested that ZmERD2 might be a stress-related gene in maize.

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Claims 13

Observationobservedoriginal resultmeasured

Claim · model-written summary

A maize Hsp70 gene was isolated and designated ZmERD2.

Taxon
maizeZea mayse0
Gene
ZmERD2e0
Outcome
Hsp70 gene was isolatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“an Hsp70 gene was isolated from maize and was designated as ZmERD2”

✓ located verbatim in the source · abstract, characters 15–81 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmERD2 full cDNA is 2375 bp.

Taxon
maizeZea mayse1
Gene
ZmERD2e0
Outcome
full cDNA sequencee0
Value
2375 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The full cDNA sequence of ZmERD2 was 2375 bp”

✓ located verbatim in the source · abstract, characters 119–163 · show in text ↑
e1

“isolated from maize”

✓ located verbatim in the source · abstract, characters 33–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmERD2 has a 1949 bp open reading frame.

Taxon
maizeZea mayse1
Gene
ZmERD2e2
Outcome
open reading frame (ORF)e0
Value
1949 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“It includes a 1949 bp open reading frame (ORF) encoding 649 amino acids”

✓ located verbatim in the source · abstract, characters 165–236 · show in text ↑
e1

“isolated from maize”

✓ located verbatim in the source · abstract, characters 33–52 · show in text ↑
e2

“designated as ZmERD2”

✓ located verbatim in the source · abstract, characters 61–81 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The ZmERD2 open reading frame encodes 649 amino acids.

Taxon
maizeZea mayse1
Gene
ZmERD2e2
Outcome
encoding 649 amino acidse0
Value
649 amino acidse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“It includes a 1949 bp open reading frame (ORF) encoding 649 amino acids”

✓ located verbatim in the source · abstract, characters 165–236 · show in text ↑
e1

“isolated from maize”

✓ located verbatim in the source · abstract, characters 33–52 · show in text ↑
e2

“designated as ZmERD2”

✓ located verbatim in the source · abstract, characters 61–81 · show in text ↑
Observationobservedoriginal resultsimulated

Claim · model-written summary

The predicted ZmERD2 molecular mass is 71.163 kDa.

Taxon
maizeZea mayse1
Gene
ZmERD2e2
Outcome
molecular masse0
Value
71.163 kDae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The calculated molecular mass was 71.163 kDa”

✓ located verbatim in the source · abstract, characters 238–282 · show in text ↑
e1

“isolated from maize”

✓ located verbatim in the source · abstract, characters 33–52 · show in text ↑
e2

“designated as ZmERD2”

✓ located verbatim in the source · abstract, characters 61–81 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmERD2 protein has an Hsp70 domain and characteristic family motifs.

Taxon
maizeZea mayse1
Gene
ZmERD2e0
Outcome
Hsp70 conservative structure domain, three typical Hsp70 family signature sequences and a cytosolic Hsp70-specific motife0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The protein encoded by ZmERD2 contains an Hsp70 conservative structure domain, three typical Hsp70 family signature sequences and a cytosolic Hsp70-specific motif”

✓ located verbatim in the source · abstract, characters 284–446 · show in text ↑
e1

“isolated from maize”

✓ located verbatim in the source · abstract, characters 33–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phylogenetic analysis found 92%–95% similarity to Hsp70 from other plants.

Taxon
maizeZea mayse1
Gene
ZmEDR2e0
Outcome
similaritye0
Value
92%–95%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ZmEDR2 shares high similarity (92%–95%) with Hsp70 of other plants”

✓ located verbatim in the source · abstract, characters 525–591 · show in text ↑
e1

“isolated from maize”

✓ located verbatim in the source · abstract, characters 33–52 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmEDR2 clustered with T. urartu and A. tauschii.

Taxon
maizeZea mayse1
Gene
ZmEDR2e2
Outcome
clustered together with T. urartu and A. tauschiie0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“was clustered together with T. urartu and A. tauschii”

✓ located verbatim in the source · abstract, characters 730–783 · show in text ↑
e1

“isolated from maize”

✓ located verbatim in the source · abstract, characters 33–52 · show in text ↑
e2

“ZmEDR2 shares”

✓ located verbatim in the source · abstract, characters 525–538 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The ZmERD2 promoter lies about 2.2 kb upstream.

Taxon
maizeZea mayse1
Gene
ZmERD2e0
Outcome
promotere0
Value
2.2 kbe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The promoter of ZmERD2, which was located at about 2.2 kb upstream of ZmERD2, was cloned”

✓ located verbatim in the source · abstract, characters 785–873 · show in text ↑
e1

“isolated from maize”

✓ located verbatim in the source · abstract, characters 33–52 · show in text ↑
Observationobservedoriginal resultsimulated

Claim · model-written summary

The promoter is predicted to have TATA-box, CAAT-box and stress-responsive elements.

Taxon
maizeZea mayse1
Gene
ZmERD2e2
Outcome
TATA-box, CAAT-box and drought-, heat-, cold-, salicylic acid- and methyl jasmonate-responsive elementse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“was predicted to contain important regulatory elements, including TATA-box, CAAT-box and drought-, heat-, cold-, salicylic acid- and methyl jasmonate-responsive elements”

✓ located verbatim in the source · abstract, characters 878–1047 · show in text ↑
e1

“isolated from maize”

✓ located verbatim in the source · abstract, characters 33–52 · show in text ↑
e2

“designated as ZmERD2”

✓ located verbatim in the source · abstract, characters 61–81 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Several stress treatments induced ZmERD2 expression in maize.

Taxon
maizeZea mayse0
Treatment
heat, high-salt, cold, polyethylene glycol, heat stress and dehydration treatmentse0
Gene
ZmERD2e0
Outcome
expression of ZmERD2e0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the expression of ZmERD2 in maize was induced by heat, high-salt, cold, polyethylene glycol, heat stress and dehydration treatments”

✓ located verbatim in the source · abstract, characters 1111–1242 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Abscisic acid did not induce ZmERD2 expression.

Taxon
maizeZea mayse0
Treatment
abscisic acide0
Gene
ZmERD2e0
Outcome
expression of ZmERD2e0
Direction
not bye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the expression of ZmERD2 in maize was induced by heat, high-salt, cold, polyethylene glycol, heat stress and dehydration treatments, but not by abscisic acid”

✓ located verbatim in the source · abstract, characters 1111–1268 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

At 42 °C ZmEDR2 expression peaked after 1 h at 40-fold control.

Taxon
maizeZea mayse1
Treatment
42 °Ce0
Gene
ZmEDR2e0
Outcome
expression of ZmEDR2e0
Direction
abovee0
Value
40-folde0
Qualifier
after 1 h of heat stresse0
Comparator
control levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The expression of ZmEDR2 was quickly induced at 42 °C and reached its peak after 1 h of heat stress, with an expression of 40-fold above the control level”

✓ located verbatim in the source · abstract, characters 1270–1424 · show in text ↑
e1

“isolated from maize”

✓ located verbatim in the source · abstract, characters 33–52 · show in text ↑

poly(ethylene glycol) · molecular: expression · Zea mays (maize)Positive and negative results

5 papers: 4 positive, 1 negative or no effect

3 papers in the same direction as this paper · 1 in the opposite direction

  1. no effect
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

heat · molecular: expression · Zea mays (maize)Positive and negative results

20 papers: 10 positive, 10 negative or no effect

9 papers in the same direction as this paper · 10 in the opposite direction

  1. no effect
  2. negative
  3. no effect

16 papers more in this group

See all 20 papers →

cold · molecular: expression · Zea mays (maize)Positive and negative results

32 papers: 21 positive, 11 negative or no effect

20 papers in the same direction as this paper · 10 in the opposite direction · 1 reporting no difference from an alternative

  1. negative
  2. no effect
  3. no effect

28 papers more in this group

See all 32 papers →

drought · molecular: expression · Zea mays (maize)Positive and negative results

65 papers: 43 positive, 22 negative or no effect

42 papers in the same direction as this paper · 22 in the opposite direction

  1. positive
  2. no effect
  3. negative

61 papers more in this group

See all 65 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.