Paper · 2016 · PLANT PHYSIOLOGY

Stability of Single-Parent Gene Expression Complementation in Maize Hybrids upon Water Deficit Stress

Caroline Marcon; Anja Paschold; Waqas Ahmed Malik; et al.

8
claims
16
verbatim quotes
42
citations
3
research areas
✓
Open access · cc-by

Abstract

Heterosis is the superior performance of F1 hybrids compared with their homozygous, genetically distinct parents. In this study, we monitored the transcriptomic divergence of the maize (Zea mays) inbred lines B73 and Mo17 and their reciprocal F1 hybrid progeny in primary roots under control and water deficit conditions simulated by polyethylene glycol treatment. Single-parent expression (SPE) of genes is an extreme instance of gene expression complementation, in which genes are active in only one of two parents but are expressed in both reciprocal hybrids. In this study, 1,997 genes only expressed in B73 and 2,024 genes only expressed in Mo17 displayed SPE complementation under control and water deficit conditions. As a consequence, the number of active genes in hybrids exceeded the number of active genes in the parental inbred lines significantly independent of treatment. SPE patterns were substantially more stable to expression changes by water deficit treatment than other genotype-specific expression profiles. While, on average, 75% of all SPE patterns were not altered in response to polyethylene glycol treatment, only 17% of the remaining genotype-specific expression patterns were not changed by water deficit. Nonsyntenic genes that lack syntenic orthologs in other grass species, and thus evolved late in the grass lineage, were significantly overrepresented among SPE genes. Hence, the significant overrepresentation of nonsyntenic genes among SPE patterns and their stability under water limitation might suggest a function of these genes during the early developmental manifestation of heterosis under fluctuating environmental conditions in hybrid progeny of the inbred lines B73 and Mo17.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Under control and water deficit conditions, 1,997 B73-only genes showed single-parent expression complementation.

Taxon
MaizeZea mayst0
Material
B73e0
Outcome
genes only expressed in B73e0
Value
1,997 genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“In this study, 1,997 genes only expressed in B73 and 2,024 genes only expressed in Mo17 displayed SPE complementation under control and water deficit conditions.”

✓ located verbatim in the source · abstract, characters 563–724 · show in text ↑
t0

“Maize”

✓ located verbatim in the source · title, characters 62–67 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Under control and water deficit conditions, 2,024 Mo17-only genes showed single-parent expression complementation.

Taxon
MaizeZea mayst0
Material
Mo17e0
Outcome
genes only expressed in Mo17e0
Value
2,024 genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“In this study, 1,997 genes only expressed in B73 and 2,024 genes only expressed in Mo17 displayed SPE complementation under control and water deficit conditions.”

✓ located verbatim in the source · abstract, characters 563–724 · show in text ↑
t0

“Maize”

✓ located verbatim in the source · title, characters 62–67 · show in text ↑
Observationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Hybrids had significantly more active genes than parental inbreds irrespective of treatment.

Taxon
MaizeZea mayst0
Outcome
number of active genese0
Direction
exceedede0
Comparator
parental inbred linese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“As a consequence, the number of active genes in hybrids exceeded the number of active genes in the parental inbred lines significantly independent of treatment.”

✓ located verbatim in the source · abstract, characters 725–885 · show in text ↑
t0

“Maize”

✓ located verbatim in the source · title, characters 62–67 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Single-parent expression patterns were more stable under water deficit than other genotype-specific expression profiles.

Taxon
MaizeZea mayst0
Treatment
water deficit treatmente0
Outcome
SPE patternse0
Direction
more stablee0
Comparator
other genotype-specific expression profilese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“SPE patterns were substantially more stable to expression changes by water deficit treatment than other genotype-specific expression profiles.”

✓ located verbatim in the source · abstract, characters 886–1028 · show in text ↑
t0

“Maize”

✓ located verbatim in the source · title, characters 62–67 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seventy-five percent of single-parent expression patterns were unchanged by polyethylene glycol treatment.

Taxon
MaizeZea mayst0
Treatment
polyethylene glycol treatmente0
Outcome
SPE patternse0
Direction
not alterede0
Value
75%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“While, on average, 75% of all SPE patterns were not altered in response to polyethylene glycol treatment, only 17% of the remaining genotype-specific expression patterns were not changed by water deficit.”

✓ located verbatim in the source · abstract, characters 1029–1233 · show in text ↑
t0

“Maize”

✓ located verbatim in the source · title, characters 62–67 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Only 17% of remaining genotype-specific expression patterns were unchanged by water deficit.

Taxon
MaizeZea mayst0
Treatment
water deficite0
Outcome
remaining genotype-specific expression patternse0
Direction
not changede0
Value
17%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“While, on average, 75% of all SPE patterns were not altered in response to polyethylene glycol treatment, only 17% of the remaining genotype-specific expression patterns were not changed by water deficit.”

✓ located verbatim in the source · abstract, characters 1029–1233 · show in text ↑
t0

“Maize”

✓ located verbatim in the source · title, characters 62–67 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Nonsyntenic genes were significantly overrepresented among single-parent expression genes.

Taxon
MaizeZea mayst0
Gene
Nonsyntenic genese0
Outcome
SPE genese0
Direction
overrepresentede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Nonsyntenic genes that lack syntenic orthologs in other grass species, and thus evolved late in the grass lineage, were significantly overrepresented among SPE genes.”

✓ located verbatim in the source · abstract, characters 1234–1400 · show in text ↑
t0

“Maize”

✓ located verbatim in the source · title, characters 62–67 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The authors suggested stable nonsyntenic genes may contribute to early heterosis under changing environments.

Taxon
MaizeZea mayst0
Gene
nonsyntenic genese0
Outcome
early developmental manifestation of heterosise0
Qualifier
under fluctuating environmental conditionse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Hence, the significant overrepresentation of nonsyntenic genes among SPE patterns and their stability under water limitation might suggest a function of these genes during the early developmental manifestation of heterosis under fluctuating environmental conditions in hybrid progeny of the inbred lines B73 and Mo17.”

✓ located verbatim in the source · abstract, characters 1401–1718 · show in text ↑
t0

“Maize”

✓ located verbatim in the source · title, characters 62–67 · show in text ↑

poly(ethylene glycol) · molecular: expression · Zea mays (maize)Positive and negative results

5 papers: 4 positive, 1 negative or no effect

3 papers in the same direction as this paper · 1 in the opposite direction

  1. no effect
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.