Paper · 2005 · Journal of Experimental Botany

Acclimation of photosynthesis to high irradiance in rice: gene expression and interactions with leaf development

E. H. Murchie; S. Hubbart; S. Peng; et al.

11
claims
28
verbatim quotes
148
citations
3
research areas
✓
Open access

Abstract

Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance focusing on the composition of the photosynthetic apparatus and leaf morphology. Typical sun/shade differences in chloroplast composition are seen in the fifth leaf following growth in high irradiance compared with low irradiance (1000 and 200 micromol m(-2) s(-1), respectively): higher light-saturated rates of photosynthesis (P(max)), higher amounts of Rubisco protein, and a lower chlorophyll a:b ratio. In addition, leaves were thicker under high light compared with low light. However, responses appear more complex when leaf developmental stage is considered. Using a system of transferring plants from low to high light in the laboratory responses that occur before and after full leaf extension have been studied. Acclimation of photosynthesis is limited by leaf age: the transfer to high light, post-leaf extension, is characterized by alterations in chlorophyll a:b but not in Rubisco protein, which may be limited by leaf morphology. Microarray analysis of gene expression was carried out on plants that were transferred to high light post-leaf extension. A down-regulation of light-harvesting genes was seen. No change in the expression level of Rubisco genes was observed. Up-regulation of genes involved in photoprotection was observed. It was also shown that high-light leaf morphology is established prior to formation of the zone of cellular elongation and division. The endogenous and environmental factors which establish the characteristics of high light acclimation may be important for attaining high rates of assimilation in leaves and crop canopies, and the fifth leaf in rice provides a convenient model system for the determination of the mechanisms involved.

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Claims 11

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The fifth leaf grown in high irradiance has higher light-saturated photosynthesis rates than in low irradiance.

Organ / stage
fifth leafe1
Treatment
growth in high irradiancee1
Outcome
light-saturated rates of photosynthesis (P(max))e2
Direction
highere2
Qualifier
1000 and 200 micromol m(-2) s(-1)e1
Comparator
low irradiancee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e1

“the fifth leaf following growth in high irradiance compared with low irradiance (1000 and 200 micromol m(-2) s(-1), respectively)”

✓ located verbatim in the source · abstract, characters 257–386 · show in text ↑
e2

“higher light-saturated rates of photosynthesis (P(max))”

✓ located verbatim in the source · abstract, characters 388–443 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The fifth leaf grown in high irradiance has higher amounts of Rubisco protein than in low irradiance.

Organ / stage
fifth leafe1
Treatment
growth in high irradiancee1
Outcome
amounts of Rubisco proteine3
Direction
highere3
Comparator
low irradiancee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e1

“the fifth leaf following growth in high irradiance compared with low irradiance (1000 and 200 micromol m(-2) s(-1), respectively)”

✓ located verbatim in the source · abstract, characters 257–386 · show in text ↑
e3

“higher amounts of Rubisco protein”

✓ located verbatim in the source · abstract, characters 445–478 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

The fifth leaf grown in high irradiance has a lower chlorophyll a:b ratio than in low irradiance.

Organ / stage
fifth leafe1
Treatment
growth in high irradiancee1
Outcome
chlorophyll a:b ratioe4
Direction
lowere4
Comparator
low irradiancee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e1

“the fifth leaf following growth in high irradiance compared with low irradiance (1000 and 200 micromol m(-2) s(-1), respectively)”

✓ located verbatim in the source · abstract, characters 257–386 · show in text ↑
e4

“a lower chlorophyll a:b ratio”

✓ located verbatim in the source · abstract, characters 484–513 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Leaves were thicker under high light than under low light.

Treatment
under high lighte5
Outcome
leaves were thickere5
Direction
thickere5
Comparator
low lighte5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e5

“leaves were thicker under high light compared with low light”

✓ located verbatim in the source · abstract, characters 528–588 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Transfer to high light after leaf extension alters chlorophyll a:b.

Treatment
the transfer to high light, post-leaf extensione6
Outcome
alterations in chlorophyll a:be6

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e6

“the transfer to high light, post-leaf extension, is characterized by alterations in chlorophyll a:b but not in Rubisco protein”

✓ located verbatim in the source · abstract, characters 884–1010 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Transfer to high light after leaf extension does not change Rubisco protein.

Treatment
the transfer to high light, post-leaf extensione6
Outcome
Rubisco proteine6
Direction
no_changeinferrede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e6

“the transfer to high light, post-leaf extension, is characterized by alterations in chlorophyll a:b but not in Rubisco protein”

✓ located verbatim in the source · abstract, characters 884–1010 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Acclimation of photosynthesis is associated with leaf age.

Organ / stage
leaf agee7
Outcome
Acclimation of photosynthesise7

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e7

“Acclimation of photosynthesis is limited by leaf age”

✓ located verbatim in the source · abstract, characters 830–882 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Light-harvesting genes are down-regulated after transfer to high light after leaf extension.

Treatment
transferred to high light post-leaf extensione2
Gene
light-harvesting genese1
Outcome
down-regulation of light-harvesting genese1
Direction
down-regulatione1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e1

“A down-regulation of light-harvesting genes was seen”

✓ located verbatim in the source · abstract, characters 1175–1227 · show in text ↑
e2

“Microarray analysis of gene expression was carried out on plants that were transferred to high light post-leaf extension”

✓ located verbatim in the source · abstract, characters 1053–1173 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Rubisco gene expression does not change after transfer to high light after leaf extension.

Treatment
transferred to high light post-leaf extensione2
Gene
Rubisco genese1
Outcome
expression level of Rubisco genese1
Direction
no_changeinferrede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e2

“Microarray analysis of gene expression was carried out on plants that were transferred to high light post-leaf extension”

✓ located verbatim in the source · abstract, characters 1053–1173 · show in text ↑
e1

“No change in the expression level of Rubisco genes was observed”

✓ located verbatim in the source · abstract, characters 1229–1292 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Genes involved in photoprotection are up-regulated after transfer to high light after leaf extension.

Treatment
transferred to high light post-leaf extensione2
Gene
genes involved in photoprotectione3
Outcome
genes involved in photoprotectione3
Direction
Up-regulatione3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e2

“Microarray analysis of gene expression was carried out on plants that were transferred to high light post-leaf extension”

✓ located verbatim in the source · abstract, characters 1053–1173 · show in text ↑
e3

“Up-regulation of genes involved in photoprotection was observed”

✓ located verbatim in the source · abstract, characters 1294–1357 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

High-light leaf morphology is established before the zone of cellular elongation and division forms.

Outcome
high-light leaf morphologye1
Qualifier
prior to formation of the zone of cellular elongation and divisione1

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Rice (Oryza sativa L.) has been used to study the long-term responses of photosynthesis to high irradiance”

✓ located verbatim in the source · abstract, characters 0–106 · show in text ↑
e1

“high-light leaf morphology is established prior to formation of the zone of cellular elongation and division”

✓ located verbatim in the source · abstract, characters 1382–1490 · show in text ↑

light · physiology: photosynthesis · Oryza sativa (rice)Results differ

47 papers: 24 positive, 23 negative or no effect

23 papers in the same direction as this paper · 23 in the opposite direction

  1. negative
  2. negative
  3. negative

43 papers more in this group

See all 47 papers →

light · molecular: expression · Oryza sativa (rice)Positive and negative results

32 papers: 20 positive, 12 negative or no effect

11 papers in the same direction as this paper · 20 in the opposite direction

  1. negative
  2. positive
  3. positive

28 papers more in this group

See all 32 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.