Paper · 2015 · Journal of Experimental Botany

U-box E3 ubiquitin ligase PUB17 acts in the nucleus to promote specific immune pathways triggered by Phytophthora infestans

Qin He; Hazel McLellan; Petra C. Boevink; et al.

10
claims
18
verbatim quotes
61
citations
2
research areas
✓
Open access

Abstract

Ubiquitination regulates many processes in plants, including immunity. The E3 ubiquitin ligase PUB17 is a positive regulator of programmed cell death (PCD) triggered by resistance proteins CF4/9 in tomato. Its role in immunity to the potato late blight pathogen, Phytophthora infestans, was investigated here. Silencing StPUB17 in potato by RNAi and NbPUB17 in Nicotiana benthamiana by virus-induced gene silencing (VIGS) each enhanced P. infestans leaf colonization. PAMP-triggered immunity (PTI) transcriptional responses activated by flg22, and CF4/Avr4-mediated PCD were attenuated by silencing PUB17. However, silencing PUB17 did not compromise PCD triggered by P. infestans PAMP INF1, or co-expression of R3a/AVR3a, demonstrating that not all PTI- and PCD-associated responses require PUB17. PUB17 localizes to the plant nucleus and especially in the nucleolus. Transient over-expression of a dominant-negative StPUB17(V314I,V316I) mutant, which retained nucleolar localization, suppressed CF4-mediated cell death and enhanced P. infestans colonization. Exclusion of the StPUB17(V314I,V316I) mutant from the nucleus abolished its dominant-negative activity, demonstrating that StPUB17 functions in the nucleus. PUB17 is a positive regulator of immunity to late blight that acts in the nucleus to promote specific PTI and PCD pathways.

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Claims 10

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing StPUB17 in potato by RNAi enhanced P. infestans leaf colonization

Treatment
Silencing StPUB17 in potato by RNAie1
Interactor
P. infestansPhytophthora infestanse1pathogen
Gene
StPUB17e1
Outcome
leaf colonizatione1
Direction
enhancede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Its role in immunity to the potato late blight pathogen, Phytophthora infestans, was investigated here”

✓ located verbatim in the source · abstract, characters 206–308 · show in text ↑
e1

“Silencing StPUB17 in potato by RNAi and NbPUB17 in Nicotiana benthamiana by virus-induced gene silencing (VIGS) each enhanced P. infestans leaf colonization”

✓ located verbatim in the source · abstract, characters 310–466 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing NbPUB17 in Nicotiana benthamiana by VIGS enhanced P. infestans leaf colonization

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Treatment
NbPUB17 in Nicotiana benthamiana by virus-induced gene silencing (VIGS)e1
Interactor
P. infestansPhytophthora infestanse1pathogen
Gene
NbPUB17e1
Outcome
leaf colonizatione1
Direction
enhancede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“Silencing StPUB17 in potato by RNAi and NbPUB17 in Nicotiana benthamiana by virus-induced gene silencing (VIGS) each enhanced P. infestans leaf colonization”

✓ located verbatim in the source · abstract, characters 310–466 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing PUB17 attenuated PTI transcriptional responses activated by flg22

Treatment
silencing PUB17e2
Outcome
PAMP-triggered immunity (PTI) transcriptional responses activated by flg22e2
Direction
attenuatede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Its role in immunity to the potato late blight pathogen, Phytophthora infestans, was investigated here”

✓ located verbatim in the source · abstract, characters 206–308 · show in text ↑
e2

“PAMP-triggered immunity (PTI) transcriptional responses activated by flg22, and CF4/Avr4-mediated PCD were attenuated by silencing PUB17”

✓ located verbatim in the source · abstract, characters 468–604 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing PUB17 attenuated CF4/Avr4-mediated PCD

Treatment
silencing PUB17e2
Gene
CF4/Avr4e2
Outcome
CF4/Avr4-mediated PCDe2
Direction
attenuatede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Its role in immunity to the potato late blight pathogen, Phytophthora infestans, was investigated here”

✓ located verbatim in the source · abstract, characters 206–308 · show in text ↑
e2

“PAMP-triggered immunity (PTI) transcriptional responses activated by flg22, and CF4/Avr4-mediated PCD were attenuated by silencing PUB17”

✓ located verbatim in the source · abstract, characters 468–604 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Silencing PUB17 did not compromise PCD triggered by P. infestans PAMP INF1

Treatment
silencing PUB17e3
Interactor
P. infestansPhytophthora infestanse3pathogen
Outcome
PCD triggered by P. infestans PAMP INF1e3
Direction
did not compromisee3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Its role in immunity to the potato late blight pathogen, Phytophthora infestans, was investigated here”

✓ located verbatim in the source · abstract, characters 206–308 · show in text ↑
e3

“However, silencing PUB17 did not compromise PCD triggered by P. infestans PAMP INF1, or co-expression of R3a/AVR3a, demonstrating that not all PTI- and PCD-associated responses require PUB17”

✓ located verbatim in the source · abstract, characters 606–796 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Silencing PUB17 did not compromise PCD triggered by co-expression of R3a/AVR3a

Treatment
silencing PUB17e3
Gene
R3a/AVR3ae3
Outcome
PCDe3
Direction
did not compromisee3
Qualifier
co-expression of R3a/AVR3ae3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Its role in immunity to the potato late blight pathogen, Phytophthora infestans, was investigated here”

✓ located verbatim in the source · abstract, characters 206–308 · show in text ↑
e3

“However, silencing PUB17 did not compromise PCD triggered by P. infestans PAMP INF1, or co-expression of R3a/AVR3a, demonstrating that not all PTI- and PCD-associated responses require PUB17”

✓ located verbatim in the source · abstract, characters 606–796 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Transient over-expression of a dominant-negative StPUB17(V314I,V316I) mutant suppressed CF4-mediated cell death

Treatment
Transient over-expression of a dominant-negative StPUB17(V314I,V316I) mutante4
Gene
StPUB17(V314I,V316I)e4
Outcome
CF4-mediated cell deathe4
Direction
suppressede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Its role in immunity to the potato late blight pathogen, Phytophthora infestans, was investigated here”

✓ located verbatim in the source · abstract, characters 206–308 · show in text ↑
e4

“Transient over-expression of a dominant-negative StPUB17(V314I,V316I) mutant, which retained nucleolar localization, suppressed CF4-mediated cell death and enhanced P. infestans colonization”

✓ located verbatim in the source · abstract, characters 868–1058 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Transient over-expression of a dominant-negative StPUB17(V314I,V316I) mutant enhanced P. infestans colonization

Treatment
Transient over-expression of a dominant-negative StPUB17(V314I,V316I) mutante4
Interactor
P. infestansPhytophthora infestanse4pathogen
Gene
StPUB17(V314I,V316I)e4
Outcome
P. infestans colonizatione4
Direction
enhancede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Its role in immunity to the potato late blight pathogen, Phytophthora infestans, was investigated here”

✓ located verbatim in the source · abstract, characters 206–308 · show in text ↑
e4

“Transient over-expression of a dominant-negative StPUB17(V314I,V316I) mutant, which retained nucleolar localization, suppressed CF4-mediated cell death and enhanced P. infestans colonization”

✓ located verbatim in the source · abstract, characters 868–1058 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

PUB17 localizes to the plant nucleus and especially to the nucleolus

Taxon
plante5
Gene
PUB17e5
Outcome
localizes to the plant nucleus and especially in the nucleoluse5

Verbatim

e5

“PUB17 localizes to the plant nucleus and especially in the nucleolus”

✓ located verbatim in the source · abstract, characters 798–866 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Exclusion of the StPUB17(V314I,V316I) mutant from the nucleus abolished its dominant-negative activity

Treatment
Exclusion of the StPUB17(V314I,V316I) mutant from the nucleuse6
Gene
StPUB17(V314I,V316I)e6
Outcome
dominant-negative activitye6
Direction
abolishede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Its role in immunity to the potato late blight pathogen, Phytophthora infestans, was investigated here”

✓ located verbatim in the source · abstract, characters 206–308 · show in text ↑
e6

“Exclusion of the StPUB17(V314I,V316I) mutant from the nucleus abolished its dominant-negative activity”

✓ located verbatim in the source · abstract, characters 1060–1162 · show in text ↑

loss of function · cytology · Solanum tuberosum (potato)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

loss of function · disease · Solanum tuberosum (potato)Positive and negative results

27 papers: 15 positive, 12 negative or no effect

11 papers in the same direction as this paper · 15 in the opposite direction

  1. positive
  2. positive
  3. positive

23 papers more in this group

See all 27 papers →

loss of function · Phytophthora infestans · Nicotiana benthamianaPositive and negative results

28 papers: 7 positive, 21 negative or no effect

20 papers in the same direction as this paper · 7 in the opposite direction

  1. positive
  2. positive
  3. negative

24 papers more in this group

See all 28 papers →

loss of function · Phytophthora infestans · Solanum tuberosum (potato)Positive and negative results

31 papers: 16 positive, 15 negative or no effect

14 papers in the same direction as this paper · 16 in the opposite direction

  1. positive
  2. positive
  3. positive

27 papers more in this group

See all 31 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.