Paper · 2004 · PLANT PHYSIOLOGY

The Arabidopsis ATR1 Myb Transcription Factor Controls Indolic Glucosinolate Homeostasis

John L. Celenza; Juan A. Quiel; Gromoslaw A. Smolen; et al.

7
claims
14
verbatim quotes
304
citations
2
research areas
✓
Open access

Abstract

Plants derive a number of important secondary metabolites from the amino acid tryptophan (Trp), including the growth regulator indole-3-acetic acid (IAA) and defense compounds against pathogens and herbivores. In previous work, we found that a dominant overexpression allele of the Arabidopsis (Arabidopsis thaliana) Myb transcription factor ATR1, atr1D, activates expression of a Trp synthesis gene as well as the Trp-metabolizing genes CYP79B2, CYP79B3, and CYP83B1, which encode enzymes implicated in production of IAA and indolic glucosinolate (IG) antiherbivore compounds. Here, we show that ATR1 overexpression confers elevated levels of IAA and IGs. In addition, we show that an atr1 loss-of-function mutation impairs expression of IG synthesis genes and confers reduced IG levels. Furthermore, the atr1-defective mutation suppresses Trp gene dysregulation in a cyp83B1 mutant background. Together, this work implicates ATR1 as a key homeostatic regulator of Trp metabolism and suggests that ATR1 can be manipulated to coordinately control the suite of enzymes that synthesize IGs.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 7

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ATR1 overexpression elevated IAA levels.

Taxon
ArabidopsisArabidopsist0
Treatment
ATR1 overexpressione0
Gene
ATR1e0
Outcome
levels of IAAe0
Direction
elevatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ATR1 overexpression confers elevated levels of IAA and IGs.”

✓ located verbatim in the source · abstract, characters 597–656 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 4–15 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ATR1 overexpression elevated indolic glucosinolate levels.

Taxon
ArabidopsisArabidopsist0
Treatment
ATR1 overexpressione0
Gene
ATR1e0
Outcome
IGse0
Direction
elevatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ATR1 overexpression confers elevated levels of IAA and IGs.”

✓ located verbatim in the source · abstract, characters 597–656 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 4–15 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The atr1 loss-of-function mutation impaired expression of indolic glucosinolate synthesis genes.

Taxon
ArabidopsisArabidopsist0
Treatment
atr1 loss-of-function mutatione0
Gene
atr1e0
Outcome
expression of IG synthesis genese0
Direction
impairse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“an atr1 loss-of-function mutation impairs expression of IG synthesis genes and confers reduced IG levels.”

✓ located verbatim in the source · abstract, characters 683–788 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 4–15 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The atr1 loss-of-function mutation reduced indolic glucosinolate levels.

Taxon
ArabidopsisArabidopsist0
Treatment
atr1 loss-of-function mutatione0
Gene
atr1e0
Outcome
IG levelse0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“an atr1 loss-of-function mutation impairs expression of IG synthesis genes and confers reduced IG levels.”

✓ located verbatim in the source · abstract, characters 683–788 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 4–15 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

An atr1-defective mutation suppressed tryptophan gene dysregulation in the cyp83B1 background.

Taxon
ArabidopsisArabidopsist0
Material
cyp83B1 mutant backgrounde0
Treatment
atr1-defective mutatione0
Gene
cyp83B1e0
Outcome
Trp gene dysregulatione0
Direction
suppressese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the atr1-defective mutation suppresses Trp gene dysregulation in a cyp83B1 mutant background.”

✓ located verbatim in the source · abstract, characters 802–895 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 4–15 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors implicate ATR1 as a homeostatic regulator of tryptophan metabolism.

Taxon
ArabidopsisArabidopsist0
Gene
ATR1e0
Outcome
Trp metabolisme0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Together, this work implicates ATR1 as a key homeostatic regulator of Trp metabolism and suggests that ATR1 can be manipulated to coordinately control the suite of enzymes that synthesize IGs.”

✓ located verbatim in the source · abstract, characters 896–1088 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 4–15 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors suggest ATR1 manipulation could coordinately control enzymes synthesizing indolic glucosinolates.

Taxon
ArabidopsisArabidopsist0
Gene
ATR1e0
Outcome
coordinately control the suite of enzymes that synthesize IGse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“suggests that ATR1 can be manipulated to coordinately control the suite of enzymes that synthesize IGs.”

✓ located verbatim in the source · abstract, characters 985–1088 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 4–15 · show in text ↑

loss of function · quality: phytochemicals · ArabidopsisPositive and negative results

7 papers: 3 positive, 4 negative or no effect

3 papers in the same direction as this paper · 3 in the opposite direction

  1. positive
  2. positive
  3. positive

3 papers more in this group

See all 7 papers →

loss of function · molecular: expression · ArabidopsisPositive and negative results

197 papers: 38 positive, 159 negative or no effect

37 papers in the same direction as this paper · 159 in the opposite direction

  1. negative
  2. negative
  3. negative

193 papers more in this group

See all 197 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.