Paper · 2002 · PLANT PHYSIOLOGY

The Arabidopsis Xylem Peptidase XCP1 Is a Tracheary Element Vacuolar Protein That May Be a Papain Ortholog

Vanessa Funk; Boonthida Kositsup; Chengsong Zhao; et al.

6
claims
12
verbatim quotes
189
citations
3
research areas
✓
Open access

Abstract

XCP1 is a xylem-specific papain-like cysteine peptidase in Arabidopsis. To determine whether XCP1 could be involved in tracheary element autolysis, promoter activity and localization of XCP1 were investigated using XCP1 promoter-beta-glucuronidase fusions and immunofluorescence confocal microscopy. A tracheary element expression pattern was detected for XCP1. Results from confocal microscopy and biochemical subcellular fractionation indicated that XCP1 was localized in the vacuole. Ectopic expression of XCP1 resulted in a reduction in plant size in some lines and early leaf senescence, as indicated by early loss of leaf chlorophyll. Reduced plant size was correlated with higher levels of XCP1, as shown by immunoblot and peptidase activity gel analyses. The XCP1 prodomain exhibits exceptionally high similarity (greater than 80%) to the prodomains of papain and other papain-like enzymes isolated from papaya (Carica papaya) laticifers when compared with all other reported papain-like enzymes. The potential for XCP1 and papain to perform common functions as catalysts of autolytic processing following cell death due to programmed suicide or to wounding is discussed.

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Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

XCP1 expression was detected in tracheary elements.

Taxon
ArabidopsisArabidopsise1
Gene
XCP1e0
Outcome
tracheary element expression patterne0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A tracheary element expression pattern was detected for XCP1.”

✓ located verbatim in the source · abstract, characters 300–361 · show in text ↑
e1

“XCP1 is a xylem-specific papain-like cysteine peptidase in Arabidopsis.”

✓ located verbatim in the source · abstract, characters 0–71 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

XCP1 was localized in the vacuole.

Taxon
ArabidopsisArabidopsise1
Gene
XCP1e0
Outcome
localized in the vacuolee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Results from confocal microscopy and biochemical subcellular fractionation indicated that XCP1 was localized in the vacuole.”

✓ located verbatim in the source · abstract, characters 362–486 · show in text ↑
e1

“XCP1 is a xylem-specific papain-like cysteine peptidase in Arabidopsis.”

✓ located verbatim in the source · abstract, characters 0–71 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Ectopic XCP1 expression reduced plant size in some lines.

Taxon
ArabidopsisArabidopsise1
Treatment
Ectopic expression of XCP1e0
Gene
XCP1e0
Outcome
plant sizee0
Direction
reductione0
Qualifier
some linese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Ectopic expression of XCP1 resulted in a reduction in plant size in some lines and early leaf senescence”

✓ located verbatim in the source · abstract, characters 487–591 · show in text ↑
e1

“XCP1 is a xylem-specific papain-like cysteine peptidase in Arabidopsis.”

✓ located verbatim in the source · abstract, characters 0–71 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Ectopic XCP1 expression caused early leaf senescence, indicated by early chlorophyll loss.

Taxon
ArabidopsisArabidopsise1
Organ / stage
leafe0
Treatment
Ectopic expression of XCP1e0
Gene
XCP1e0
Outcome
early leaf senescencee0
Qualifier
early loss of leaf chlorophylle0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Ectopic expression of XCP1 resulted in a reduction in plant size in some lines and early leaf senescence, as indicated by early loss of leaf chlorophyll.”

✓ located verbatim in the source · abstract, characters 487–640 · show in text ↑
e1

“XCP1 is a xylem-specific papain-like cysteine peptidase in Arabidopsis.”

✓ located verbatim in the source · abstract, characters 0–71 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Smaller plant size correlated with higher XCP1 levels.

Taxon
ArabidopsisArabidopsise1
Gene
XCP1e0
Outcome
plant sizee0
Direction
Reducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Reduced plant size was correlated with higher levels of XCP1, as shown by immunoblot and peptidase activity gel analyses.”

✓ located verbatim in the source · abstract, characters 641–762 · show in text ↑
e1

“XCP1 is a xylem-specific papain-like cysteine peptidase in Arabidopsis.”

✓ located verbatim in the source · abstract, characters 0–71 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The XCP1 prodomain showed over 80% similarity to papain and other papaya peptidase prodomains relative to other reported enzymes.

Taxon
ArabidopsisArabidopsise1
Gene
XCP1e0
Outcome
similaritye0
Direction
exceptionally highe0
Value
greater than 80%e0
Comparator
papain and other papain-like enzymes isolated from papaya (Carica papaya) laticiferse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The XCP1 prodomain exhibits exceptionally high similarity (greater than 80%) to the prodomains of papain and other papain-like enzymes isolated from papaya (Carica papaya) laticifers when compared with all other reported papain-like enzymes.”

✓ located verbatim in the source · abstract, characters 763–1004 · show in text ↑
e1

“XCP1 is a xylem-specific papain-like cysteine peptidase in Arabidopsis.”

✓ located verbatim in the source · abstract, characters 0–71 · show in text ↑

overexpression · quality: postharvest · ArabidopsisPositive and negative results

11 papers: 4 positive, 7 negative or no effect

6 papers in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
  3. positive

7 papers more in this group

See all 11 papers →

overexpression · growth · ArabidopsisPositive and negative results

109 papers: 71 positive, 38 negative or no effect

37 papers in the same direction as this paper · 71 in the opposite direction

  1. positive
  2. positive
  3. positive

105 papers more in this group

See all 109 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.