Paper · 1999 · Development

Members of the YABBY gene family specify abaxial cell fate in Arabidopsis

Kellee R. Siegfried; Yuval Eshed; Stuart F. Baum; et al.

7
claims
14
verbatim quotes
741
citations
2
research areas
—
Not open access

Abstract

Lateral organs produced by shoot apical and flower meristems exhibit a fundamental abaxial-adaxial asymmetry. We describe three members of the YABBY gene family, FILAMENTOUS FLOWER, YABBY2 and YABBY3, isolated on the basis of homology to CRABS CLAW. Each of these genes is expressed in a polar manner in all lateral organ primordia produced from the apical and flower meristems. The expression of these genes is precisely correlated with abaxial cell fate in mutants in which abaxial cell fates are found ectopically, reduced or eliminated. Ectopic expression of either FILAMENTOUS FLOWER or YABBY3 is sufficient to specify the development of ectopic abaxial tissues in lateral organs. Conversely, loss of polar expression of these two genes results in a loss of polar differentiation of tissues in lateral organs. Taken together, these observations indicate that members of this gene family are responsible for the specification of abaxial cell fate in lateral organs of Arabidopsis. Furthermore, ectopic expression studies suggest that ubiquitous abaxial cell fate and maintenance of a functional apical meristem are incompatible.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

FILAMENTOUS FLOWER, YABBY2 and YABBY3 are YABBY family members homologous to CRABS CLAW.

Taxon
ArabidopsisArabidopsist0
Gene
YABBY gene familye0
Outcome
isolated on the basis of homology to CRABS CLAWe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“three members of the YABBY gene family, FILAMENTOUS FLOWER, YABBY2 and YABBY3, isolated on the basis of homology to CRABS CLAW”

✓ located verbatim in the source · abstract, characters 122–248 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 62–73 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The three YABBY genes are expressed polarly in lateral organ primordia.

Taxon
ArabidopsisArabidopsist0
Organ / stage
lateral organ primordiae0
Gene
YABBYt0
Outcome
expressed in a polar mannere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Each of these genes is expressed in a polar manner in all lateral organ primordia produced from the apical and flower meristems”

✓ located verbatim in the source · abstract, characters 250–377 · show in text ↑
t0

“YABBY gene family specify abaxial cell fate in Arabidopsis”

✓ located verbatim in the source · title, characters 15–73 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

YABBY expression correlates with abaxial cell fate in mutants.

Taxon
ArabidopsisArabidopsist0
Gene
YABBYt0
Outcome
abaxial cell fatee0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The expression of these genes is precisely correlated with abaxial cell fate in mutants in which abaxial cell fates are found ectopically, reduced or eliminated”

✓ located verbatim in the source · abstract, characters 379–539 · show in text ↑
t0

“YABBY gene family specify abaxial cell fate in Arabidopsis”

✓ located verbatim in the source · title, characters 15–73 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ectopic FILAMENTOUS FLOWER expression specifies ectopic abaxial tissue.

Taxon
ArabidopsisArabidopsist0
Treatment
Ectopic expression of either FILAMENTOUS FLOWERe0
Gene
FILAMENTOUS FLOWERe0
Outcome
development of ectopic abaxial tissuese0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Ectopic expression of either FILAMENTOUS FLOWER or YABBY3 is sufficient to specify the development of ectopic abaxial tissues in lateral organs”

✓ located verbatim in the source · abstract, characters 541–684 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 62–73 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ectopic YABBY3 expression specifies ectopic abaxial tissue.

Taxon
ArabidopsisArabidopsist0
Treatment
YABBY3e0
Gene
YABBY3e0
Outcome
development of ectopic abaxial tissuese0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Ectopic expression of either FILAMENTOUS FLOWER or YABBY3 is sufficient to specify the development of ectopic abaxial tissues in lateral organs”

✓ located verbatim in the source · abstract, characters 541–684 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 62–73 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Loss of polar expression of the two genes causes loss of polar tissue differentiation.

Taxon
ArabidopsisArabidopsist0
Treatment
loss of polar expressione0
Outcome
polar differentiation of tissuese0
Direction
losse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“loss of polar expression of these two genes results in a loss of polar differentiation of tissues in lateral organs”

✓ located verbatim in the source · abstract, characters 698–813 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 62–73 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Ubiquitous abaxial fate may be incompatible with functional apical meristems.

Taxon
ArabidopsisArabidopsist0
Outcome
maintenance of a functional apical meristeme0
Qualifier
ubiquitous abaxial cell fatee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ubiquitous abaxial cell fate and maintenance of a functional apical meristem are incompatible”

✓ located verbatim in the source · abstract, characters 1038–1131 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 62–73 · show in text ↑

overexpression · growth · ArabidopsisPositive and negative results

109 papers: 71 positive, 38 negative or no effect

70 papers in the same direction as this paper · 38 in the opposite direction

  1. negative
  2. negative
  3. negative

105 papers more in this group

See all 109 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.