Paper · 2006 · Plant Cell & Environment

Mechanisms of microbially enhanced Fe acquisition in red clover (Trifolium pratense L.)

CHONG WEI JIN; YUN FENG HE; CAI XIAN TANG; et al.

15
claims
31
verbatim quotes
114
citations
2
research areas
✓
Open access

Abstract

Soil microorganisms may play an important role in plant Fe uptake from soils with low Fe bioavailability, but there is little direct experimental evidence to date. We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil to investigate the role of soil microbial activity in plant Fe uptake. Compared with plants grown in non-sterlie (NS) grown plants, growth and Fe content of the sterile(s) grown plants was significantly inhibited, but was improved by foliar application of Fe EDTA, indicating that soil microbial activity should play an important role in plant Fe acquisition. When soil solution was incubated with phenolic root exudates from Fe-deficient red clover, a few microbial species thrived while growth of the rest was inhibited, suggesting that the Fe-deficient (-Fe) root exudates selectively influenced the rhizosphere's microbial community. Eighty six per cent of the phenolic-tolerant microbes could produce siderophore [the Fe(III) chelator] under -Fe conditions, and 71% could secrete auxin-like compounds. Interestingly, the synthetic and microbial auxins (MAs) significantly enhanced the Ferric reduction system, suggesting that MAs, in addition to siderophores, are important to plant Fe uptake. Finally, plant growth and Fe uptake in sterilized soil were significantly increased by rhizobia inoculation. Root Fe-EDTA reductase activity in the -Fe plant was significantly enhanced by rhizobia infection, and the rhizobia could produce auxin but not siderophore under Fe-limiting conditions, suggesting that the contribution of nodulating rhizobia to plant Fe uptake can be at least partially attributed to stimulation of turbo reductase activity through nodule formation and auxin production in the rhizosphere. Based on these observations, we propose as a model that root exudates from -Fe plants selectively influence the rhizosphere microbial community, and the microbes in turn favour plant Fe acquisition by producing siderophores and auxins.

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Claims 15

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Growth and Fe content of red clover grown in sterile soil were significantly inhibited compared with non-sterile plants.

Taxon
red cloverTrifolium pratensee0
Treatment
sterilee1
Outcome
growth and Fe contente1
Direction
inhibitede1
Comparator
non-sterlie (NS) grown plantse1
Setting
calcareous soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e1

“Compared with plants grown in non-sterlie (NS) grown plants, growth and Fe content of the sterile(s) grown plants was significantly inhibited”

✓ located verbatim in the source · abstract, characters 310–451 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Foliar application of Fe EDTA improved growth and Fe content of sterile-grown red clover.

Taxon
red cloverTrifolium pratensee0
Treatment
foliar application of Fe EDTAe2
Outcome
growth and Fe contente1
Direction
improvede2
Comparator
sterile(s) grown plantse1
Setting
calcareous soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e1

“Compared with plants grown in non-sterlie (NS) grown plants, growth and Fe content of the sterile(s) grown plants was significantly inhibited”

✓ located verbatim in the source · abstract, characters 310–451 · show in text ↑
e2

“but was improved by foliar application of Fe EDTA”

✓ located verbatim in the source · abstract, characters 453–502 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Soil microbial activity is probably an important factor in plant Fe acquisition.

Taxon
red cloverTrifolium pratensee0
Outcome
plant Fe acquisitione3
Qualifier
soil microbial activitye3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e3

“indicating that soil microbial activity should play an important role in plant Fe acquisition”

✓ located verbatim in the source · abstract, characters 504–597 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Phenolic root exudates from Fe-deficient red clover allowed a few microbial species to thrive in soil solution.

Taxon
red cloverTrifolium pratensee0
Treatment
phenolic root exudates from Fe-deficient red clovere4
Interactor
microbial speciese4other
Outcome
a few microbial species thrivede4

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e4

“When soil solution was incubated with phenolic root exudates from Fe-deficient red clover, a few microbial species thrived while growth of the rest was inhibited”

✓ located verbatim in the source · abstract, characters 599–760 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Phenolic root exudates from Fe-deficient red clover inhibited the growth of the other microbial species in soil solution.

Taxon
red cloverTrifolium pratensee0
Treatment
phenolic root exudates from Fe-deficient red clovere4
Interactor
microbial speciese4other
Outcome
growth of the reste4
Direction
inhibitede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e4

“When soil solution was incubated with phenolic root exudates from Fe-deficient red clover, a few microbial species thrived while growth of the rest was inhibited”

✓ located verbatim in the source · abstract, characters 599–760 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Fe-deficient root exudates probably selectively influence the rhizosphere microbial community of red clover.

Taxon
red cloverTrifolium pratensee0
Outcome
rhizosphere's microbial communitye5
Qualifier
selectively influencede5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e5

“the Fe-deficient (-Fe) root exudates selectively influenced the rhizosphere's microbial community”

✓ located verbatim in the source · abstract, characters 778–875 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Eighty six per cent of the phenolic-tolerant microbes could produce siderophore under -Fe conditions.

Taxon
red cloverTrifolium pratensee0
Interactor
phenolic-tolerant microbese6other
Compound
siderophoree6
Outcome
produce siderophoree6
Value
Eighty six per cente6
Qualifier
under -Fe conditionse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e6

“Eighty six per cent of the phenolic-tolerant microbes could produce siderophore [the Fe(III) chelator] under -Fe conditions, and 71% could secrete auxin-like compounds”

✓ located verbatim in the source · abstract, characters 877–1044 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

71% of the phenolic-tolerant microbes could secrete auxin-like compounds.

Taxon
red cloverTrifolium pratensee0
Interactor
phenolic-tolerant microbese6other
Outcome
secrete auxin-like compoundse6
Value
71%e6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e6

“Eighty six per cent of the phenolic-tolerant microbes could produce siderophore [the Fe(III) chelator] under -Fe conditions, and 71% could secrete auxin-like compounds”

✓ located verbatim in the source · abstract, characters 877–1044 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Synthetic and microbial auxins significantly enhanced the Ferric reduction system of red clover.

Taxon
red cloverTrifolium pratensee0
Treatment
synthetic and microbial auxinse7
Outcome
the Ferric reduction systeme7
Direction
enhancede7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e7

“the synthetic and microbial auxins (MAs) significantly enhanced the Ferric reduction system”

✓ located verbatim in the source · abstract, characters 1061–1152 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Microbial auxins are probably important for plant Fe uptake in addition to siderophores.

Taxon
red cloverTrifolium pratensee0
Compound
MAse1
Outcome
plant Fe uptakee1
Qualifier
in addition to siderophorese1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e1

“suggesting that MAs, in addition to siderophores, are important to plant Fe uptake”

✓ located verbatim in the source · abstract, characters 1154–1236 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Rhizobia inoculation significantly increased plant growth and Fe uptake in sterilized soil.

Taxon
red cloverTrifolium pratensee0
Treatment
rhizobia inoculatione2
Interactor
rhizobiae2symbiont
Outcome
plant growth and Fe uptakee2
Direction
increasede2
Setting
sterilized soile2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e2

“Finally, plant growth and Fe uptake in sterilized soil were significantly increased by rhizobia inoculation”

✓ located verbatim in the source · abstract, characters 1238–1345 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Rhizobia infection significantly enhanced root Fe-EDTA reductase activity in Fe-deficient red clover.

Taxon
red cloverTrifolium pratensee0
Organ / stage
Roote3
Treatment
rhizobia infectione3
Interactor
rhizobiae3symbiont
Outcome
Root Fe-EDTA reductase activitye3
Direction
enhancede3
Qualifier
-Fe plante3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e3

“Root Fe-EDTA reductase activity in the -Fe plant was significantly enhanced by rhizobia infection”

✓ located verbatim in the source · abstract, characters 1347–1444 · show in text ↑
Observationobservedoriginal resultmixedmeasured

Claim · model-written summary

Rhizobia could produce auxin but not siderophore under Fe-limiting conditions.

Taxon
red cloverTrifolium pratensee0
Interactor
rhizobiae4symbiont
Outcome
produce auxin but not siderophoree4
Qualifier
under Fe-limiting conditionse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e4

“the rhizobia could produce auxin but not siderophore under Fe-limiting conditions”

✓ located verbatim in the source · abstract, characters 1450–1531 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Nodulating rhizobia probably contribute to plant Fe uptake through nodule formation and auxin production.

Taxon
red cloverTrifolium pratensee0
Interactor
nodulating rhizobiae5symbiont
Outcome
plant Fe uptakee5
Qualifier
nodule formation and auxin productione5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e5

“the contribution of nodulating rhizobia to plant Fe uptake can be at least partially attributed to stimulation of turbo reductase activity through nodule formation and auxin production in the rhizosphere”

✓ located verbatim in the source · abstract, characters 1549–1752 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Rhizosphere microbes probably favour plant Fe acquisition by producing siderophores and auxins.

Taxon
red cloverTrifolium pratensee0
Outcome
favour plant Fe acquisitione6
Qualifier
by producing siderophores and auxinse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trifolium pratense
Trifolium pratense · TaxonIvar Leidus · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“We grew red clover, an Fe-efficient leguminous plant, in a calcareous soil”

✓ located verbatim in the source · abstract, characters 164–238 · show in text ↑
e6

“the microbes in turn favour plant Fe acquisition by producing siderophores and auxins”

✓ located verbatim in the source · abstract, characters 1903–1988 · show in text ↑

iron atom · growth · Trifolium pratense (red clover)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. negative
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ethylenediaminetetraacetic acid · growth · Trifolium pratense (red clover)Results agree

2 papers: 2 positive, 0 negative or no effect

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application · growth · Trifolium pratense (red clover)Positive and negative results

5 papers: 3 positive, 2 negative or no effect

2 papers in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. no effect
  3. positive

1 paper more in this group

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inoculation · growth · Trifolium pratense (red clover)Positive and negative results

18 papers: 16 positive, 2 negative or no effect

15 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. negative
  3. no effect

14 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.