Paper · 2011 · Plant Signaling & Behavior

Identification and characterization of the major mitochondrial Fe transporter in rice

Khurram Bashir; Yasuhiro Ishimaru; Naoko K. Nishizawa

9
claims
20
verbatim quotes
50
citations
2
research areas
✓
Open access

Abstract

The uptake, translocation, and compartmentalization of Fe are essential for plant cell function and life cycle. Despite rapid progress in our understanding of Fe homeostasis in plants, Fe transport from the cytoplasm to mitochondria was, until recently, poorly understood. The screening of 3,993 mutant lines for symptoms of Fe deficiency resulted in the identification and characterization of a major mitochondrial Fe transporter (MIT) in rice. MIT was found to localize to mitochondria and to complement the growth of a yeast strain defective in mitochondrial Fe transport. The knock-out of MIT resulted in a lethal phenotype, and in knock-down plants, several agronomic characteristics were compromised, such as plant height, average number of tillers, days to flower, fertility, and yield. Changes in the expression of genes involved in Fe transport suggested a disturbance of cellular Fe transport. Furthermore, the mitochondrial Fe concentration and the activity of the mitochondrial Fe-S enzyme aconitase were significantly reduced compared with wild-type plants. The identification of MIT is a significant advance in the field of plant Fe nutrition and should facilitate the cloning of paralogs from other plant species.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

Screening rice mutants identified a major mitochondrial iron transporter, MIT.

Gene
MITe0
Outcome
major mitochondrial Fe transportere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“identification and characterization of a major mitochondrial Fe transporter (MIT) in rice”

✓ located verbatim in the source · abstract, characters 355–444 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

MIT localized to mitochondria.

Gene
MITe0
Outcome
localize to mitochondriae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“MIT was found to localize to mitochondria”

✓ located verbatim in the source · abstract, characters 446–487 · show in text ↑
e1

“in rice”

✓ located verbatim in the source · abstract, characters 437–444 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

MIT complemented growth of yeast defective in mitochondrial iron transport.

Gene
MITe1
Outcome
complement the growth of a yeast strain defective in mitochondrial Fe transporte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“to complement the growth of a yeast strain defective in mitochondrial Fe transport”

✓ located verbatim in the source · abstract, characters 492–574 · show in text ↑
e1

“MIT was found to localize to mitochondria”

✓ located verbatim in the source · abstract, characters 446–487 · show in text ↑
e2

“in rice”

✓ located verbatim in the source · abstract, characters 437–444 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

MIT knock out resulted in a lethal phenotype in rice.

Treatment
knock-out of MITe0
Gene
MITe0
Outcome
lethal phenotypee0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The knock-out of MIT resulted in a lethal phenotype”

✓ located verbatim in the source · abstract, characters 576–627 · show in text ↑
e1

“in rice”

✓ located verbatim in the source · abstract, characters 437–444 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

MIT knock down compromised plant height, tiller number and days to flower.

Treatment
knock-downe0
Outcome
plant height, average number of tillers, days to flowere0
Direction
compromisede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“in knock-down plants, several agronomic characteristics were compromised, such as plant height, average number of tillers, days to flower, fertility, and yield”

✓ located verbatim in the source · abstract, characters 633–792 · show in text ↑
e1

“in rice”

✓ located verbatim in the source · abstract, characters 437–444 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

MIT knock down compromised fertility and yield.

Treatment
knock-downe0
Outcome
fertility, and yielde0
Direction
compromisede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“in knock-down plants, several agronomic characteristics were compromised, such as plant height, average number of tillers, days to flower, fertility, and yield”

✓ located verbatim in the source · abstract, characters 633–792 · show in text ↑
e1

“in rice”

✓ located verbatim in the source · abstract, characters 437–444 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Expression changes in iron transport genes suggested disturbed cellular iron transport.

Gene
genes involved in Fe transporte0
Outcome
cellular Fe transporte0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Changes in the expression of genes involved in Fe transport suggested a disturbance of cellular Fe transport”

✓ located verbatim in the source · abstract, characters 794–902 · show in text ↑
e1

“in rice”

✓ located verbatim in the source · abstract, characters 437–444 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Mitochondrial iron concentration was significantly reduced compared with wild type rice.

Treatment
knock-downe1
Outcome
mitochondrial Fe concentratione0
Direction
reducede0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“mitochondrial Fe concentration and the activity of the mitochondrial Fe-S enzyme aconitase were significantly reduced compared with wild-type plants”

✓ located verbatim in the source · abstract, characters 921–1069 · show in text ↑
e1

“in knock-down plants”

✓ located verbatim in the source · abstract, characters 633–653 · show in text ↑
e2

“in rice”

✓ located verbatim in the source · abstract, characters 437–444 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Mitochondrial aconitase activity was significantly reduced compared with wild type rice.

Treatment
knock-downe1
Gene
aconitasee0
Outcome
activity of the mitochondrial Fe-S enzyme aconitasee0
Direction
reducede0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“mitochondrial Fe concentration and the activity of the mitochondrial Fe-S enzyme aconitase were significantly reduced compared with wild-type plants”

✓ located verbatim in the source · abstract, characters 921–1069 · show in text ↑
e1

“in knock-down plants”

✓ located verbatim in the source · abstract, characters 633–653 · show in text ↑
e2

“in rice”

✓ located verbatim in the source · abstract, characters 437–444 · show in text ↑

iron atom · pest · Oryza sativa (rice)Positive and negative results

5 papers: 3 positive, 2 negative or no effect

1 paper in the same direction as this paper · 3 in the opposite direction

  1. positive
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loss of function · pest · Oryza sativa (rice)Positive and negative results

22 papers: 7 positive, 15 negative or no effect

14 papers in the same direction as this paper · 7 in the opposite direction

  1. positive
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loss of function · yield · Oryza sativa (rice)Positive and negative results

134 papers: 62 positive, 72 negative or no effect

71 papers in the same direction as this paper · 62 in the opposite direction

  1. positive
  2. positive
  3. positive

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.