Paper · 1992 · The Plant Journal

Cis‐analysis of a seed protein gene promoter: the conservative RY repeat CATGCATG within the legumin box is essential for tissue‐specific expression of a legumin gene

Helmut Bäumlein; Istvan Nagy†; Raimundo Villarroel; et al.

5
claims
11
verbatim quotes
208
citations
1
research areas
—
Not open access

Abstract

A 2.4 kb fragment containing the 5'-flanking region and the 5'-noncoding sequence of the Vicia faba legumin gene LeB4 mediates high level seed-specific expression in transgenic tobacco plants. Deleted derivatives of this legumin upstream sequence were fused to the npt-II reporter gene to determine the tissue-specific activity of the chimeric constructs in stably transformed tobacco plants. The results indicate the presence of positive regulatory, enhancer-like cis elements within 566 bp of the upstream sequence. Most importantly, however, these elements are only fully functional in conjunction with the core motif CATGCATG of the legumin box around position -95, since destruction of the motif by a 6 bp deletion in an otherwise intact 2.4 kb upstream sequence drastically reduces expression in seeds. At the same time, low level expression in leaves is observed. The occurrence of similar CATGCATG consensus cis elements with alternating purine and pyrimidine base pairs in front of several other plant genes suggests a functional role of the motif in a wider range of plant promoters.

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Claims 5

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The Vicia faba LeB4 promoter fragment mediated high seed-specific expression in tobacco.

Taxon
tobacco plantsNicotiana tabacume0
Material
transgenic tobacco plantse0
Organ / stage
seede0
Gene
Vicia faba legumin gene LeB4e0
Outcome
seed-specific expressione0
Direction
high levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“A 2.4 kb fragment containing the 5'-flanking region and the 5'-noncoding sequence of the Vicia faba legumin gene LeB4 mediates high level seed-specific expression in transgenic tobacco plants”

✓ located verbatim in the source · abstract, characters 0–191 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Positive enhancer-like cis elements were identified within 566 bp upstream.

Taxon
tobacco plantsNicotiana tabacume1
Gene
positive regulatory, enhancer-like cis elementse0
Outcome
presence of positive regulatory, enhancer-like cis elementse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“The results indicate the presence of positive regulatory, enhancer-like cis elements within 566 bp of the upstream sequence”

✓ located verbatim in the source · abstract, characters 393–516 · show in text ↑
e1

“stably transformed tobacco plants”

✓ located verbatim in the source · abstract, characters 358–391 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Deleting the CATGCATG motif drastically reduced seed expression.

Taxon
tobacco plantsNicotiana tabacume2
Treatment
6 bp deletione0
Gene
core motif CATGCATGe1
Outcome
expression in seedse0
Direction
drastically reducese0
Comparator
otherwise intact 2.4 kb upstream sequencee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“destruction of the motif by a 6 bp deletion in an otherwise intact 2.4 kb upstream sequence drastically reduces expression in seeds”

✓ located verbatim in the source · abstract, characters 676–807 · show in text ↑
e1

“core motif CATGCATG of the legumin box”

✓ located verbatim in the source · abstract, characters 610–648 · show in text ↑
e2

“stably transformed tobacco plants”

✓ located verbatim in the source · abstract, characters 358–391 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The motif deletion allowed low expression in leaves.

Taxon
tobacco plantsNicotiana tabacume2
Organ / stage
leavese0
Gene
core motif CATGCATGe1
Outcome
expression in leavese0
Direction
low levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“At the same time, low level expression in leaves is observed”

✓ located verbatim in the source · abstract, characters 809–869 · show in text ↑
e1

“core motif CATGCATG of the legumin box”

✓ located verbatim in the source · abstract, characters 610–648 · show in text ↑
e2

“stably transformed tobacco plants”

✓ located verbatim in the source · abstract, characters 358–391 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Related promoter motifs suggest a wider functional role.

Taxon
tobacco plantsNicotiana tabacume1
Gene
CATGCATG consensus cis elementse0
Outcome
a functional role of the motif in a wider range of plant promoterse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“The occurrence of similar CATGCATG consensus cis elements with alternating purine and pyrimidine base pairs in front of several other plant genes suggests a functional role of the motif in a wider range of plant promoters”

✓ located verbatim in the source · abstract, characters 871–1092 · show in text ↑
e1

“stably transformed tobacco plants”

✓ located verbatim in the source · abstract, characters 358–391 · show in text ↑

loss of function · molecular: expression · Nicotiana tabacum (tobacco)Positive and negative results

50 papers: 14 positive, 36 negative or no effect

35 papers in the same direction as this paper · 14 in the opposite direction

  1. positive
  2. positive
  3. positive

46 papers more in this group

See all 50 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.