Paper · 2013 · Journal of Proteomics

Proteomics and transcriptomics of broccoli subjected to exogenously supplied and transgenic senescence-induced cytokinin for amelioration of postharvest yellowing

Mao-Sen Liu; Hui-Chun Li; Ying-Mi Lai; et al.

11
claims
22
verbatim quotes
45
citations
2
research areas
✓
Open access · cc-by-nc-nd

Abstract

Previously, we investigated transgenic broccoli harboring senescence-associated-gene (SAG) promoter-triggered isopentenyltransferase (ipt), which encodes the key enzyme for cytokinin (CK) synthesis and mimics the action of exogenous supplied CK in delaying postharvest senescence of broccoli. Here, we used proteomics and transcriptomics to compare the mechanisms of ipt-transgenic and N(6)-benzylaminopurine (BA) CK treatment of broccoli during postharvest storage. The 2 treatments conferred common and distinct mechanisms. BA treatment decreased the quantity of proteins involved in energy and carbohydrate metabolism and amino acid metabolism, and ipt-transgenic treatment increased that of stress-related proteins and molecular chaperones and slightly affected levels of carbohydrate metabolism proteins. Both treatments regulated genes involved in CK signaling, sugar transport, energy and carbohydrate metabolism, amino acid metabolism and lipid metabolism, although ipt-transgenic treatment to a lesser extent. BA treatment induced genes encoding molecular chaperones, whereas ipt-transgenic treatment induced stress-related genes for cellular protection during storage. Both BA and ipt-transgenic treatments acted antagonistically on ethylene functions. We propose a long-term acclimation of metabolism and protection systems with ipt-transgenic treatment of broccoli and short-term modulation of metabolism and establishment of a protection system with both BA and ipt-transgenic treatments in delaying senescence of broccoli florets. BIOLOGICAL SIGNIFICANCE: Transgenic broccoli harboring senescence-associated-gene (SAG) promoter-triggered isopentenyltransferase (ipt), which encodes the key enzyme for cytokinin (CK) synthesis and N(6)-benzylaminopurine (BA) CK treated broccoli both showed retardation of postharvest senescence during storage. The mechanisms underlying the two treatments were compared. The combination of proteomic and transcriptomic evidences revealed that the 2 treatments conferred common and distinct mechanisms in delaying senescence of broccoli florets. We propose a long-term acclimation of metabolism and protection systems with ipt-transgenic treatment of broccoli and short-term modulation of metabolism and establishment of a protection system with both BA and ipt-transgenic treatments in delaying senescence of broccoli florets. This article is part of a Special Issue entitled: Translational Plant Proteomics.

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Claims 11

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

BA treatment reduced abundance of energy, carbohydrate and amino-acid metabolism proteins.

Treatment
BA treatmente0
Outcome
quantity of proteins involved in energy and carbohydrate metabolism and amino acid metabolisme0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“BA treatment decreased the quantity of proteins involved in energy and carbohydrate metabolism and amino acid metabolism”

✓ located verbatim in the source · abstract, characters 526–646 · show in text ↑
t0

“broccoli”

✓ located verbatim in the source · title, characters 34–42 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ipt-transgenic treatment increased stress-related proteins and molecular chaperones.

Treatment
ipt-transgenic treatmente0
Outcome
stress-related proteins and molecular chaperonese0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ipt-transgenic treatment increased that of stress-related proteins and molecular chaperones”

✓ located verbatim in the source · abstract, characters 652–743 · show in text ↑
t0

“broccoli”

✓ located verbatim in the source · title, characters 34–42 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ipt-transgenic treatment slightly affected carbohydrate-metabolism proteins.

Treatment
ipt-transgenic treatmente0
Outcome
levels of carbohydrate metabolism proteinse0
Qualifier
slightly affectede0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ipt-transgenic treatment increased that of stress-related proteins and molecular chaperones and slightly affected levels of carbohydrate metabolism proteins.”

✓ located verbatim in the source · abstract, characters 652–809 · show in text ↑
t0

“broccoli”

✓ located verbatim in the source · title, characters 34–42 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

BA regulated genes involved in cytokinin signaling, sugar transport and energy, carbohydrate, amino-acid and lipid metabolism.

Treatment
BAe1
Outcome
genes involved in CK signaling, sugar transport, energy and carbohydrate metabolism, amino acid metabolism and lipid metabolisme0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Both treatments regulated genes involved in CK signaling, sugar transport, energy and carbohydrate metabolism, amino acid metabolism and lipid metabolism”

✓ located verbatim in the source · abstract, characters 810–963 · show in text ↑
e1

“Both BA and ipt-transgenic treatments acted antagonistically on ethylene functions.”

✓ located verbatim in the source · abstract, characters 1179–1262 · show in text ↑
t0

“broccoli”

✓ located verbatim in the source · title, characters 34–42 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ipt-transgenic treatment regulated those gene groups to a lesser extent.

Treatment
ipt-transgenic treatmente0
Outcome
genes involved in CK signaling, sugar transport, energy and carbohydrate metabolism, amino acid metabolism and lipid metabolisme0
Direction
lesser extente0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Both treatments regulated genes involved in CK signaling, sugar transport, energy and carbohydrate metabolism, amino acid metabolism and lipid metabolism, although ipt-transgenic treatment to a lesser extent.”

✓ located verbatim in the source · abstract, characters 810–1018 · show in text ↑
t0

“broccoli”

✓ located verbatim in the source · title, characters 34–42 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

BA induced genes encoding molecular chaperones.

Treatment
BA treatmente0
Outcome
genes encoding molecular chaperonese0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“BA treatment induced genes encoding molecular chaperones”

✓ located verbatim in the source · abstract, characters 1019–1075 · show in text ↑
t0

“broccoli”

✓ located verbatim in the source · title, characters 34–42 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ipt-transgenic treatment induced stress-related cellular-protection genes during storage.

Treatment
ipt-transgenic treatmente0
Outcome
stress-related genes for cellular protectione0
Direction
inducede0
Qualifier
during storagee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ipt-transgenic treatment induced stress-related genes for cellular protection during storage.”

✓ located verbatim in the source · abstract, characters 1085–1178 · show in text ↑
t0

“broccoli”

✓ located verbatim in the source · title, characters 34–42 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

BA antagonized ethylene functions.

Treatment
BAe0
Outcome
ethylene functionse0
Direction
antagonisticallye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Both BA and ipt-transgenic treatments acted antagonistically on ethylene functions.”

✓ located verbatim in the source · abstract, characters 1179–1262 · show in text ↑
t0

“broccoli”

✓ located verbatim in the source · title, characters 34–42 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ipt-transgenic treatment antagonized ethylene functions.

Treatment
ipt-transgenic treatmentse0
Outcome
ethylene functionse0
Direction
antagonisticallye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Both BA and ipt-transgenic treatments acted antagonistically on ethylene functions.”

✓ located verbatim in the source · abstract, characters 1179–1262 · show in text ↑
t0

“broccoli”

✓ located verbatim in the source · title, characters 34–42 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

BA treatment retarded postharvest senescence during storage.

Treatment
N(6)-benzylaminopurine (BA) CKe0
Outcome
postharvest senescencee0
Direction
retardatione0
Qualifier
during storagee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“N(6)-benzylaminopurine (BA) CK treated broccoli both showed retardation of postharvest senescence during storage.”

✓ located verbatim in the source · abstract, characters 1744–1857 · show in text ↑
t0

“broccoli”

✓ located verbatim in the source · title, characters 34–42 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ipt-transgenic broccoli retarded postharvest senescence during storage.

Treatment
Transgenic broccoli harboring senescence-associated-gene (SAG) promoter-triggered isopentenyltransferase (ipt)e0
Outcome
postharvest senescencee0
Direction
retardatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica oleracea var. italica
Brassica oleracea var. italica · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Transgenic broccoli harboring senescence-associated-gene (SAG) promoter-triggered isopentenyltransferase (ipt), which encodes the key enzyme for cytokinin (CK) synthesis and N(6)-benzylaminopurine (BA) CK treated broccoli both showed retardation of postharvest senescence during storage.”

✓ located verbatim in the source · abstract, characters 1570–1857 · show in text ↑

N-benzyladenine · quality: postharvest · Brassica oleracea (wild cabbage)Results agree

6 papers: 6 positive, 0 negative or no effect

5 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

2 papers more in this group

See all 6 papers →

class · quality: postharvest · Brassica oleracea (wild cabbage)Positive and negative results

4 papers: 3 positive, 1 negative or no effect

2 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. no effect
  3. positive
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.