Paper · 2013 · Plant Disease

First Report of Fusarium commune Causing Damping-off, Seed Rot, and Seedling Root Rot on Soybean (Glycine max) in the United States

M. L. Ellis; M. M. Díaz Arias; D. R. Cruz Jimenez; et al.

10
claims
21
verbatim quotes
36
citations
1
research areas
—
Not open access

Abstract

During 2007 to 2009, symptomatic and asymptomatic soybean plants were collected from fields in 18 Iowa counties. Fusarium isolates were recovered from surface-sterilized root tissue on peptone PCNB agar (2). Single-spore isolates were transferred to synthetic low nutrient agar (SNA) overlain with pieces (1 × 2 cm) of sterile filter paper, and to potato dextrose agar (PDA), and placed in the dark for 10 to 14 days for morphological identification (4). Twenty-three isolates were identified as Fusarium commune K. Skovg., O'Donnell & Nirenberg, previously in the F. oxysporum species complex (4). Colonies on PDA had white, fluffy, aerial mycelium with magenta to violet pigmentation in the medium. On SNA, macroconidia, chlamydospores, and microconidia on monophialides and polyphialides were consistent with the species description (4). Identification of all 23 isolates was confirmed by DNA sequencing of the translation elongation factor (EF1-α) gene, using ef1 and ef2 primers, and the mitochondrial small subunit (mtSSU), using primers MS1 and MS2 (4) [GenBank accessions for two representative isolates: EF1-α (JX289892 and JX289893), and mtSSU (JX289894 and, JX289895)]. Pathogenicity of two representative isolates of F. commune was tested on soybean (cv. AG2403) in a greenhouse, in water baths set at 18°C, using autoclaved soil mixed with infested sand-cornmeal inoculum (3). The experiment entailed a completely randomized design (CRD) with five replications (single plant/150 ml cone) per treatment, and was conducted three times. Dry root and shoot weights, and root rot severity (visual estimate of percent root rot on the entire root system) were evaluated after 6 weeks. Mean seedling emergence in soil infested with F. commune was 47 and 40% for the two isolates; in contrast, non-inoculated control plants had 100% emergence. There were significant differences in root (P < 0.0001) and shoot (P < 0.0001) weights, and root rot severity (P < 0.0001), between inoculated and non-inoculated plants. Seedlings that emerged were severely stunted and had dark brown lesions. F. commune was reisolated from infected roots of inoculated plants, but not from non-inoculated plants. Pathogenicity of both isolates to soybean (cv. MN1805) was also tested using a petri dish assay, in which eight seeds were placed on a plate with a 4-day-old culture growing on 2% water agar (1). Plates were rated 7 days later for seed germination, seed rot, and lesion development, using an ordinal scale (1). The experiment entailed a CRD with three replicate plates/treatment, and was conducted three times. Germination of inoculated seeds ranged from 37.5 to 75.0%, and germinated seedlings had dark brown lesions on the taproots. There was a significant difference between isolates in the petri dish assay (P = 0.0030); one isolate was less aggressive, but both isolates resulted in significantly more disease than on the non-inoculated control plants, which had 100% germination and no symptoms (P < 0.0001). F. oxysporum is a known soybean pathogen (1), but isolates of F. commune may have been misidentified as F. oxysporum in previous studies. To our knowledge, this is the first report of F. commune as a pathogen on soybean in the U.S.A. References: (1) K. E. Broders et al. Plant Dis. 91:727, 2007. (2) J. F. Leslie and B. A. Summerell. The Fusarium Laboratory Manual. Blackwell Publishing, Oxford, UK, 2006. (3) G. P. Munkvold and J. K. O'Mara. Plant Dis. 86:143, 2002. (4) K. Skovgaard et al. Mycologia. 94:630, 2003.

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Claims 10

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Fusarium commune causes damping-off, seed rot and seedling root rot of soybean.

Taxon
SoybeanGlycine maxt0
Interactor
Fusarium communeFusarium communet0pathogen
Outcome
Damping-off, Seed Rot, and Seedling Root Rott0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“First Report of Fusarium commune Causing Damping-off, Seed Rot, and Seedling Root Rot on Soybean (Glycine max)”

✓ located verbatim in the source · title, characters 0–110 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

All 23 isolates recovered from soybean in Iowa were identified as Fusarium commune.

Taxon
soybeanGlycine maxe0
Interactor
Fusarium communeFusarium communee1pathogen
Outcome
Identification of all 23 isolatese2
Setting
18 Iowa countiese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“soybean plants were collected from fields in 18 Iowa counties”

✓ located verbatim in the source · abstract, characters 50–111 · show in text ↑
e1

“Twenty-three isolates were identified as Fusarium commune”

✓ located verbatim in the source · abstract, characters 455–512 · show in text ↑
e2

“Identification of all 23 isolates was confirmed by DNA sequencing”

✓ located verbatim in the source · abstract, characters 841–906 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Seedling emergence in soil infested with F. commune was 47 and 40% for the two isolates, versus 100% in non-inoculated controls.

Taxon
soybeanGlycine maxe6
Treatment
soil infested with F. communee3
Interactor
F. communeFusarium communee3pathogen
Outcome
seedling emergencee3
Direction
decreaseinferrede3
Value
47 and 40%e3
Comparator
non-inoculated control plantse3
Setting
greenhousee6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e3

“Mean seedling emergence in soil infested with F. commune was 47 and 40% for the two isolates; in contrast, non-inoculated control plants had 100% emergence”

✓ located verbatim in the source · abstract, characters 1691–1846 · show in text ↑
e6

“was tested on soybean (cv. AG2403) in a greenhouse”

✓ located verbatim in the source · abstract, characters 1240–1290 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Root and shoot weights differed significantly between inoculated and non-inoculated soybean plants.

Taxon
soybeanGlycine maxe6
Treatment
inoculatede4
Outcome
Dry root and shoot weightse5
Comparator
non-inoculated plantse4

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e4

“There were significant differences in root (P < 0.0001) and shoot (P < 0.0001) weights, and root rot severity (P < 0.0001), between inoculated and non-inoculated plants”

✓ located verbatim in the source · abstract, characters 1848–2016 · show in text ↑
e5

“Dry root and shoot weights, and root rot severity”

✓ located verbatim in the source · abstract, characters 1547–1596 · show in text ↑
e6

“was tested on soybean (cv. AG2403) in a greenhouse”

✓ located verbatim in the source · abstract, characters 1240–1290 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Root rot severity differed significantly between inoculated and non-inoculated soybean plants.

Taxon
soybeanGlycine maxe6
Treatment
inoculatede4
Outcome
root rot severitye4
Comparator
non-inoculated plantse4

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e4

“There were significant differences in root (P < 0.0001) and shoot (P < 0.0001) weights, and root rot severity (P < 0.0001), between inoculated and non-inoculated plants”

✓ located verbatim in the source · abstract, characters 1848–2016 · show in text ↑
e6

“was tested on soybean (cv. AG2403) in a greenhouse”

✓ located verbatim in the source · abstract, characters 1240–1290 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Seedlings that emerged from inoculated soil were severely stunted and had dark brown lesions.

Taxon
soybeanGlycine maxe6
Outcome
severely stuntede7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e6

“was tested on soybean (cv. AG2403) in a greenhouse”

✓ located verbatim in the source · abstract, characters 1240–1290 · show in text ↑
e7

“Seedlings that emerged were severely stunted and had dark brown lesions”

✓ located verbatim in the source · abstract, characters 2018–2089 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

F. commune was reisolated from infected roots of inoculated soybean plants but not from non-inoculated plants.

Taxon
soybeanGlycine maxe6
Interactor
F. communeFusarium communee7pathogen
Outcome
reisolatede7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e6

“was tested on soybean (cv. AG2403) in a greenhouse”

✓ located verbatim in the source · abstract, characters 1240–1290 · show in text ↑
e7

“F. commune was reisolated from infected roots of inoculated plants, but not from non-inoculated plants”

✓ located verbatim in the source · abstract, characters 2091–2193 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Germination of inoculated soybean seeds in the petri dish assay ranged from 37.5 to 75.0%.

Taxon
soybeanGlycine maxe4
Outcome
Germination of inoculated seedse7
Value
37.5 to 75.0%e7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e7

“Germination of inoculated seeds ranged from 37.5 to 75.0%”

✓ located verbatim in the source · abstract, characters 2606–2663 · show in text ↑
e4

“Pathogenicity of both isolates to soybean (cv. MN1805) was also tested using a petri dish assay”

✓ located verbatim in the source · abstract, characters 2195–2290 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Both isolates caused significantly more disease on soybean than on non-inoculated control plants in the petri dish assay.

Taxon
soybeanGlycine maxe4
Treatment
both isolatese5
Outcome
diseasee5
Direction
moree5
Comparator
non-inoculated control plantse5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e4

“Pathogenicity of both isolates to soybean (cv. MN1805) was also tested using a petri dish assay”

✓ located verbatim in the source · abstract, characters 2195–2290 · show in text ↑
e5

“both isolates resulted in significantly more disease than on the non-inoculated control plants, which had 100% germination and no symptoms”

✓ located verbatim in the source · abstract, characters 2857–2995 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

One F. commune isolate was less aggressive than the other on soybean in the petri dish assay.

Taxon
soybeanGlycine maxe4
Outcome
difference between isolatese5
Direction
less aggressivee5
Value
P = 0.0030e5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e4

“Pathogenicity of both isolates to soybean (cv. MN1805) was also tested using a petri dish assay”

✓ located verbatim in the source · abstract, characters 2195–2290 · show in text ↑
e5

“There was a significant difference between isolates in the petri dish assay (P = 0.0030); one isolate was less aggressive”

✓ located verbatim in the source · abstract, characters 2730–2851 · show in text ↑

infection · growth · Glycine max (soybean)Positive and negative results

36 papers: 9 positive, 27 negative or no effect

26 papers in the same direction as this paper · 9 in the opposite direction

  1. positive
  2. positive
  3. positive

32 papers more in this group

See all 36 papers →

inoculation · disease · Glycine max (soybean)Positive and negative results

127 papers: 60 positive, 67 negative or no effect

66 papers in the same direction as this paper · 60 in the opposite direction

  1. positive
  2. positive
  3. positive

123 papers more in this group

See all 127 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.