Paper · 2014 · The Plant Cell

Environmental History Modulates Arabidopsis Pattern-Triggered Immunity in a HISTONE ACETYLTRANSFERASE1–Dependent Manner

Prashant Singh; Shweta Yekondi; Po-Wen Chen; et al.

14
claims
21
verbatim quotes
164
citations
2
research areas
✓
Open access

Abstract

In nature, plants are exposed to a fluctuating environment, and individuals exposed to contrasting environmental factors develop different environmental histories. Whether different environmental histories alter plant responses to a current stress remains elusive. Here, we show that environmental history modulates the plant response to microbial pathogens. Arabidopsis thaliana plants exposed to repetitive heat, cold, or salt stress were more resistant to virulent bacteria than Arabidopsis grown in a more stable environment. By contrast, long-term exposure to heat, cold, or exposure to high concentrations of NaCl did not provide enhanced protection against bacteria. Enhanced resistance occurred with priming of Arabidopsis pattern-triggered immunity (PTI)-responsive genes and the potentiation of PTI-mediated callose deposition. In repetitively stress-challenged Arabidopsis, PTI-responsive genes showed enrichment for epigenetic marks associated with transcriptional activation. Upon bacterial infection, enrichment of RNA polymerase II at primed PTI marker genes was observed in environmentally challenged Arabidopsis. Finally, repetitively stress-challenged histone acetyltransferase1-1 (hac1-1) mutants failed to demonstrate enhanced resistance to bacteria, priming of PTI, and increased open chromatin states. These findings reveal that environmental history shapes the plant response to bacteria through the development of a HAC1-dependent epigenetic mark characteristic of a primed PTI response, demonstrating a mechanistic link between the primed state in plants and epigenetics.

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Claims 14

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Repeated heat stress increased Arabidopsis resistance to virulent bacteria relative to stable conditions.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
repetitive heate0
Interactor
virulent bacteriae0pathogen
Outcome
resistant to virulent bacteriae0
Direction
more resistante0
Comparator
Arabidopsis grown in a more stable environmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis thaliana plants exposed to repetitive heat, cold, or salt stress were more resistant to virulent bacteria than Arabidopsis grown in a more stable environment.”

✓ located verbatim in the source · abstract, characters 359–529 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Repeated cold stress increased Arabidopsis resistance to virulent bacteria relative to stable conditions.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
colde0
Interactor
virulent bacteriae0pathogen
Outcome
resistant to virulent bacteriae0
Direction
more resistante0
Comparator
Arabidopsis grown in a more stable environmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis thaliana plants exposed to repetitive heat, cold, or salt stress were more resistant to virulent bacteria than Arabidopsis grown in a more stable environment.”

✓ located verbatim in the source · abstract, characters 359–529 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Repeated salt stress increased Arabidopsis resistance to virulent bacteria relative to stable conditions.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
salt stresse0
Interactor
virulent bacteriae0pathogen
Outcome
resistant to virulent bacteriae0
Direction
more resistante0
Comparator
Arabidopsis grown in a more stable environmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Arabidopsis thaliana plants exposed to repetitive heat, cold, or salt stress were more resistant to virulent bacteria than Arabidopsis grown in a more stable environment.”

✓ located verbatim in the source · abstract, characters 359–529 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Long-term heat exposure did not enhance protection against bacteria.

Taxon
ArabidopsisArabidopsist0
Treatment
long-term exposure to heate0
Interactor
bacteriaBacteriae0pathogen
Outcome
protection against bacteriae0
Direction
did not provide enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“long-term exposure to heat, cold, or exposure to high concentrations of NaCl did not provide enhanced protection against bacteria.”

✓ located verbatim in the source · abstract, characters 543–673 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 32–43 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Long-term cold exposure did not enhance protection against bacteria.

Taxon
ArabidopsisArabidopsist0
Treatment
colde0
Interactor
bacteriaBacteriae0pathogen
Outcome
protection against bacteriae0
Direction
did not provide enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“long-term exposure to heat, cold, or exposure to high concentrations of NaCl did not provide enhanced protection against bacteria.”

✓ located verbatim in the source · abstract, characters 543–673 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 32–43 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

High NaCl exposure did not enhance protection against bacteria.

Taxon
ArabidopsisArabidopsist0
Treatment
high concentrations of NaCle0
Interactor
bacteriaBacteriae0pathogen
Outcome
protection against bacteriae0
Direction
did not provide enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“exposure to high concentrations of NaCl did not provide enhanced protection against bacteria.”

✓ located verbatim in the source · abstract, characters 580–673 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 32–43 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Enhanced resistance coincided with priming of PTI-responsive genes.

Taxon
ArabidopsisArabidopsise0
Gene
pattern-triggered immunity (PTI)-responsive genese0
Outcome
Enhanced resistancee0
Direction
Enhancede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Enhanced resistance occurred with priming of Arabidopsis pattern-triggered immunity (PTI)-responsive genes”

✓ located verbatim in the source · abstract, characters 674–780 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Enhanced resistance coincided with potentiated PTI-mediated callose deposition.

Taxon
ArabidopsisArabidopsise0
Outcome
PTI-mediated callose depositione0
Direction
potentiatione0
Qualifier
Enhanced resistancee0

Not reportedOrgan / stage

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Enhanced resistance occurred with priming of Arabidopsis pattern-triggered immunity (PTI)-responsive genes and the potentiation of PTI-mediated callose deposition.”

✓ located verbatim in the source · abstract, characters 674–837 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

PTI-responsive genes in repeatedly stressed Arabidopsis were enriched for activation-associated epigenetic marks.

Taxon
ArabidopsisArabidopsise0
Gene
PTI-responsive genese0
Outcome
epigenetic marks associated with transcriptional activatione0
Direction
enrichmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In repetitively stress-challenged Arabidopsis, PTI-responsive genes showed enrichment for epigenetic marks associated with transcriptional activation.”

✓ located verbatim in the source · abstract, characters 838–988 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

After bacterial infection, RNA polymerase II was enriched at primed PTI marker genes in environmentally challenged Arabidopsis.

Taxon
ArabidopsisArabidopsise0
Interactor
bacteriale0pathogen
Gene
RNA polymerase IIe0
Outcome
RNA polymerase II at primed PTI marker genese0
Direction
enrichmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Upon bacterial infection, enrichment of RNA polymerase II at primed PTI marker genes was observed in environmentally challenged Arabidopsis.”

✓ located verbatim in the source · abstract, characters 989–1129 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Repeatedly stressed hac1-1 mutants did not gain enhanced bacterial resistance.

Taxon
ArabidopsisArabidopsist0
Material
histone acetyltransferase1-1 (hac1-1) mutantse0
Interactor
bacteriaBacteriae0pathogen
Outcome
enhanced resistance to bacteriae0
Direction
failed to demonstratee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“repetitively stress-challenged histone acetyltransferase1-1 (hac1-1) mutants failed to demonstrate enhanced resistance to bacteria”

✓ located verbatim in the source · abstract, characters 1139–1269 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 32–43 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Repeatedly stressed hac1-1 mutants failed to show PTI priming.

Taxon
ArabidopsisArabidopsist0
Material
histone acetyltransferase1-1 (hac1-1) mutantse0
Outcome
priming of PTIe0
Direction
failed to demonstratee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“repetitively stress-challenged histone acetyltransferase1-1 (hac1-1) mutants failed to demonstrate enhanced resistance to bacteria, priming of PTI, and increased open chromatin states.”

✓ located verbatim in the source · abstract, characters 1139–1323 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 32–43 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Repeatedly stressed hac1-1 mutants failed to show increased open chromatin.

Taxon
ArabidopsisArabidopsist0
Material
histone acetyltransferase1-1 (hac1-1) mutantse0
Outcome
open chromatin statese0
Direction
failed to demonstratee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“repetitively stress-challenged histone acetyltransferase1-1 (hac1-1) mutants failed to demonstrate enhanced resistance to bacteria, priming of PTI, and increased open chromatin states.”

✓ located verbatim in the source · abstract, characters 1139–1323 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 32–43 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors infer that a HAC1-dependent epigenetic mark links environmental history to primed PTI and bacterial response.

Taxon
ArabidopsisArabidopsist0
Interactor
bacteriaBacteriae0pathogen
Gene
HAC1e0
Outcome
plant response to bacteriae0
Qualifier
HAC1-dependent epigenetic marke0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“environmental history shapes the plant response to bacteria through the development of a HAC1-dependent epigenetic mark characteristic of a primed PTI response”

✓ located verbatim in the source · abstract, characters 1351–1510 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 32–43 · show in text ↑

heat · Bacteria · ArabidopsisPositive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. positive
See all 2 papers →

cold · disease · Arabidopsis thaliana (thale cress)Positive and negative results

7 papers: 2 positive, 5 negative or no effect

1 paper in the same direction as this paper · 5 in the opposite direction

  1. positive
  2. negative
  3. no effect

3 papers more in this group

See all 7 papers →

heat · disease · Arabidopsis thaliana (thale cress)Positive and negative results

8 papers: 5 positive, 3 negative or no effect

4 papers in the same direction as this paper · 3 in the opposite direction

  1. negative
  2. negative
  3. no effect

4 papers more in this group

See all 8 papers →

salinity · disease · Arabidopsis thaliana (thale cress)Positive and negative results

10 papers: 6 positive, 4 negative or no effect

5 papers in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. negative
  3. negative

6 papers more in this group

See all 10 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.