Paper · 2009 · Biochemistry (Moscow)

Induction of Arabidopsis gdh2 gene expression during changes in redox state of the mitochondrial respiratory chain

V. I. Tarasenko; E. Yu. Garnik; V. N. Shmakov; et al.

8
claims
15
verbatim quotes
26
citations
2
research areas
—
Not open access

Abstract

Expression of the gdh2 gene encoding the alpha-subunit of mitochondrial glutamate dehydrogenase depends on redox state of the mitochondrial electron transport chain. Treatment of Arabidopsis thaliana cell suspension with antimycin A, a respiratory chain complex III inhibitor, resulted in an increase in gdh2 transcripts within 2 h. Inhibition of complex I by rotenone did not influence the transcript level, but treatment with potassium cyanide, a complex IV inhibitor, also increased the transcript content. Thus, gdh2 gene expression obviously responds to changes in the respiratory chain segment localized between complexes I and III. Lack of activation of gene expression after treatment of a cell suspension with hydrogen peroxide and the prooxidant paraquat and results of experiments with antioxidants suggest that gdh2 gene expression is not associated with increased content of reactive oxygen species generated during inhibition of the electron transport chain. Protein phosphorylation by serine/threonine protein kinases is the essential step required for signal transduction into nucleus resulting in the induction of gdh2 expression.

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Claims 8

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Antimycin A increased Arabidopsis gdh2 transcripts within two hours.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
antimycin Ae0
Gene
gdh2e0
Outcome
gdh2 transcriptse0
Direction
increasee0
Value
2 he0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Treatment of Arabidopsis thaliana cell suspension with antimycin A, a respiratory chain complex III inhibitor, resulted in an increase in gdh2 transcripts within 2 h”

✓ located verbatim in the source · abstract, characters 166–331 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Rotenone inhibition of complex I did not affect gdh2 transcript level.

Taxon
ArabidopsisArabidopsist0
Treatment
rotenonee0
Gene
gdh2t0
Outcome
transcript levele0
Direction
did not influencee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Inhibition of complex I by rotenone did not influence the transcript level”

✓ located verbatim in the source · abstract, characters 333–407 · show in text ↑
t0

“Induction of Arabidopsis gdh2 gene expression during changes in redox state of the mitochondrial respiratory chain”

✓ located verbatim in the source · title, characters 0–114 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Potassium cyanide increased gdh2 transcript content.

Taxon
ArabidopsisArabidopsist0
Treatment
potassium cyanidee0
Gene
gdh2t0
Outcome
transcript contente0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“treatment with potassium cyanide, a complex IV inhibitor, also increased the transcript content”

✓ located verbatim in the source · abstract, characters 413–508 · show in text ↑
t0

“Induction of Arabidopsis gdh2 gene expression during changes in redox state of the mitochondrial respiratory chain”

✓ located verbatim in the source · title, characters 0–114 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

hydrogen peroxide did not activate gdh2 expression.

Taxon
ArabidopsisArabidopsist0
Treatment
hydrogen peroxidee0
Gene
gdh2t0
Outcome
gene expressione0
Direction
Lack of activatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Lack of activation of gene expression after treatment of a cell suspension with hydrogen peroxide and the prooxidant paraquat”

✓ located verbatim in the source · abstract, characters 639–764 · show in text ↑
t0

“Induction of Arabidopsis gdh2 gene expression during changes in redox state of the mitochondrial respiratory chain”

✓ located verbatim in the source · title, characters 0–114 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

paraquat did not activate gdh2 expression.

Taxon
ArabidopsisArabidopsist0
Treatment
paraquate0
Gene
gdh2t0
Outcome
gene expressione0
Direction
Lack of activatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Lack of activation of gene expression after treatment of a cell suspension with hydrogen peroxide and the prooxidant paraquat”

✓ located verbatim in the source · abstract, characters 639–764 · show in text ↑
t0

“Induction of Arabidopsis gdh2 gene expression during changes in redox state of the mitochondrial respiratory chain”

✓ located verbatim in the source · title, characters 0–114 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

gdh2 expression responds to respiratory chain changes between complexes I and III.

Taxon
ArabidopsisArabidopsist0
Gene
gdh2e0
Outcome
gdh2 gene expressione0
Qualifier
changes in the respiratory chain segment localized between complexes I and IIIe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“gdh2 gene expression obviously responds to changes in the respiratory chain segment localized between complexes I and III”

✓ located verbatim in the source · abstract, characters 516–637 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 13–24 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

gdh2 expression was interpreted as unrelated to increased reactive oxygen species during respiratory inhibition.

Taxon
ArabidopsisArabidopsist0
Gene
gdh2e0
Outcome
gdh2 gene expressione0
Qualifier
increased content of reactive oxygen speciese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“gdh2 gene expression is not associated with increased content of reactive oxygen species generated during inhibition of the electron transport chain”

✓ located verbatim in the source · abstract, characters 823–971 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 13–24 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Serine/threonine protein kinase phosphorylation is required for induction of gdh2 expression.

Taxon
ArabidopsisArabidopsist0
Gene
serine/threonine protein kinasese0
Outcome
induction of gdh2 expressione0
Qualifier
Protein phosphorylatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Protein phosphorylation by serine/threonine protein kinases is the essential step required for signal transduction into nucleus resulting in the induction of gdh2 expression”

✓ located verbatim in the source · abstract, characters 973–1146 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 13–24 · show in text ↑

hydrogen peroxide · molecular: expression · ArabidopsisPositive and negative results

17 papers: 13 positive, 4 negative or no effect

3 papers in the same direction as this paper · 13 in the opposite direction

  1. positive
  2. positive
  3. positive

13 papers more in this group

See all 17 papers →

rotenone · molecular: expression · ArabidopsisResults agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. no effect
See all 2 papers →

paraquat · molecular: expression · ArabidopsisResults agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. no effect
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.