Paper · 2001 · The Plant Journal

A deficiency of coproporphyrinogen III oxidase causes lesion formation in Arabidopsis

Atsushi Ishikawa; Hiroki Okamoto; Yukimoto Iwasaki; et al.

10
claims
17
verbatim quotes
168
citations
4
research areas
—
Not open access

Abstract

We isolated an Arabidopsis lesion initiation 2 (lin2) mutant, which develops lesion formation on leaves and siliques in a developmentally regulated and light-dependent manner. The phenotype of the lin2 plants resulted from a single nuclear recessive mutation, and LIN2 was isolated by a T-DNA tagging approach. LIN2 encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway, in Arabidopsis. The lin2 plants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection. These results demonstrate that a porphyrin pathway impairment is responsible for the lesion initiation phenotype, which leads to the activation of defense responses, in Arabidopsis. Lesion formation was not suppressed, and was even enhanced when accumulation of salicylic acid (SA) was prevented in lin2 plants by the expression of an SA-degrading salicylate hydroxylase (nahG) gene. This suggests that the lesion formation triggered in lin2 plants is determined prior to or independently of the accumulation of SA but that the accumulation is required to limit the spread of lesions in lin2 plants.

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Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

The lin2 mutant develops lesion formation on leaves and siliques in a developmentally regulated and light-dependent manner.

Taxon
ArabidopsisArabidopsise1
Material
lin2e1
Organ / stage
leaves and siliquese1
Outcome
lesion formatione1
Qualifier
developmentally regulated and light-dependent mannere1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“We isolated an Arabidopsis lesion initiation 2 (lin2) mutant, which develops lesion formation on leaves and siliques in a developmentally regulated and light-dependent manner”

✓ located verbatim in the source · abstract, characters 0–174 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The lin2 phenotype results from a single nuclear recessive mutation.

Taxon
ArabidopsisArabidopsist0
Material
lin2 plantse2
Outcome
phenotypee2
Qualifier
resulted from a single nuclear recessive mutatione2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“causes lesion formation in Arabidopsis”

✓ located verbatim in the source · title, characters 47–85 · show in text ↑
e2

“The phenotype of the lin2 plants resulted from a single nuclear recessive mutation”

✓ located verbatim in the source · abstract, characters 176–258 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

LIN2 encodes coproporphyrinogen III oxidase, a key enzyme of chlorophyll and heme biosynthesis in Arabidopsis.

Taxon
ArabidopsisArabidopsist0
Gene
LIN2e3
Outcome
LIN2 encodes coproporphyrinogen III oxidasee3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“causes lesion formation in Arabidopsis”

✓ located verbatim in the source · title, characters 47–85 · show in text ↑
e3

“LIN2 encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme”

✓ located verbatim in the source · abstract, characters 311–420 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The lin2 plants express cytological and molecular markers associated with defense responses.

Taxon
ArabidopsisArabidopsist0
Material
lin2 plantse4
Outcome
cytological and molecular markerse4
Qualifier
associated with the defense responsese4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“causes lesion formation in Arabidopsis”

✓ located verbatim in the source · title, characters 47–85 · show in text ↑
e4

“The lin2 plants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection”

✓ located verbatim in the source · abstract, characters 462–598 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

A porphyrin pathway impairment is responsible for the lesion initiation phenotype in Arabidopsis.

Taxon
ArabidopsisArabidopsise5
Outcome
lesion initiation phenotypee5
Qualifier
porphyrin pathway impairmente5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“These results demonstrate that a porphyrin pathway impairment is responsible for the lesion initiation phenotype, which leads to the activation of defense responses, in Arabidopsis”

✓ located verbatim in the source · abstract, characters 600–780 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The porphyrin pathway impairment leads to activation of defense responses in Arabidopsis.

Taxon
ArabidopsisArabidopsise5
Outcome
activation of defense responsese5
Qualifier
porphyrin pathway impairmente5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“These results demonstrate that a porphyrin pathway impairment is responsible for the lesion initiation phenotype, which leads to the activation of defense responses, in Arabidopsis”

✓ located verbatim in the source · abstract, characters 600–780 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Expression of nahG did not suppress lesion formation in lin2 plants.

Taxon
ArabidopsisArabidopsist0
Material
lin2 plantse6
Treatment
expression of an SA-degrading salicylate hydroxylase (nahG) genee6
Gene
nahGe6
Compound
salicylic acide6
Outcome
Lesion formatione6
Direction
not suppressede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“causes lesion formation in Arabidopsis”

✓ located verbatim in the source · title, characters 47–85 · show in text ↑
e6

“Lesion formation was not suppressed, and was even enhanced when accumulation of salicylic acid (SA) was prevented in lin2 plants by the expression of an SA-degrading salicylate hydroxylase (nahG) gene”

✓ located verbatim in the source · abstract, characters 782–982 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Expression of nahG enhanced lesion formation in lin2 plants.

Taxon
ArabidopsisArabidopsist0
Material
lin2 plantse6
Treatment
expression of an SA-degrading salicylate hydroxylase (nahG) genee6
Gene
nahGe6
Compound
salicylic acide6
Outcome
Lesion formatione6
Direction
enhancede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“causes lesion formation in Arabidopsis”

✓ located verbatim in the source · title, characters 47–85 · show in text ↑
e6

“Lesion formation was not suppressed, and was even enhanced when accumulation of salicylic acid (SA) was prevented in lin2 plants by the expression of an SA-degrading salicylate hydroxylase (nahG) gene”

✓ located verbatim in the source · abstract, characters 782–982 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Accumulation of SA is required to limit the spread of lesions in lin2 plants.

Taxon
ArabidopsisArabidopsist0
Compound
SAe7
Outcome
spread of lesionse7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“causes lesion formation in Arabidopsis”

✓ located verbatim in the source · title, characters 47–85 · show in text ↑
e7

“This suggests that the lesion formation triggered in lin2 plants is determined prior to or independently of the accumulation of SA but that the accumulation is required to limit the spread of lesions in lin2 plants”

✓ located verbatim in the source · abstract, characters 984–1198 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Lesion formation in lin2 plants is determined prior to or independently of SA accumulation.

Taxon
ArabidopsisArabidopsist0
Compound
SAe7
Outcome
lesion formatione7
Qualifier
determined prior to or independently of the accumulation of SAe7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“causes lesion formation in Arabidopsis”

✓ located verbatim in the source · title, characters 47–85 · show in text ↑
e7

“This suggests that the lesion formation triggered in lin2 plants is determined prior to or independently of the accumulation of SA but that the accumulation is required to limit the spread of lesions in lin2 plants”

✓ located verbatim in the source · abstract, characters 984–1198 · show in text ↑

salicylate · disease · ArabidopsisPositive and negative results

6 papers: 1 positive, 5 negative or no effect

4 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
  3. negative

2 papers more in this group

See all 6 papers →

transgenic · disease · ArabidopsisPositive and negative results

55 papers: 36 positive, 19 negative or no effect

18 papers in the same direction as this paper · 36 in the opposite direction

  1. negative
  2. positive
  3. positive

51 papers more in this group

See all 55 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.