Paper · 2025 · Environmental and Experimental Botany

Transcriptomic analysis reveals distinct strategies of two potato cultivars against Phytophthora infestans and identifies StWRKY26 as a positive regulator of late blight resistance

Jingye Fu; Ben Ma; Li Zhu; et al.

9
claims
25
verbatim quotes
4
citations
3
research areas
✓
Open access · cc-by-nc-nd

Abstract

Late blight caused by Phytophthora infestans seriously threatens world’s potato production. Understanding the responsive mechanism of potato to P. infestans infection and exploring key regulators would be advantageous for improving the late blight resistance. Here, we firstly assessed the late blight resistance of 10 potato cultivars collected from Liangshan Yi Autonomous Prefecture and found that Chuan Liang Shu (CLS) is highly resistant, while Bu Wu Yu (BWY) is extremely susceptible. Comparative transcriptomics further revealed distinct mechanisms of CLS and BWY in response to P. infestans infection, in which CLS activates defense pathways rapidly, while BWY prioritizes energy towards growth and development pathways. Specifically, the up-regulated genes in CLS were largely enriched in oxidation-reduction process and SA-related pathways, resulting in activated ROS-scavenging systems and SA signaling. Clustering analysis for the expression patterns of transcription factors (TFs) demonstrates that the WRKY family members were significantly enriched in a cluster that is specifically induced in CLS after P. infestans infection. Silencing StWRKY26, one of the four WRKYs with higher induction levels, significantly compromise the intrinsic resistance against P. infestans in CLS. Our study enriches the knowledge of transcriptional responses of potato under P. infestans infection and provide candidate genes for breeding potato cultivars with strong late blight resistance. • Comparative transcriptomics reveals CLS (resistant) activates defense pathways quickly, while BWY (susceptible) prioritizes energy for growth. • Elevated SA signaling and oxidation-reduction process contribute to the increased resistance of CLS against P. infestans . • StWRKY26 was identified as a positive regulator for late blight resistance in CLS.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc-nd. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Chuan Liang Shu was highly resistant to late blight.

Material
Chuan Liang Shue0
Interactor
Phytophthora infestansPhytophthora infestanse2pathogen
Outcome
highly resistante0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Chuan Liang Shu (CLS) is highly resistant”

✓ located verbatim in the source · abstract, characters 401–442 · show in text ↑
e1

“late blight resistance of 10 potato cultivars”

✓ located verbatim in the source · abstract, characters 290–335 · show in text ↑
e2

“Phytophthora infestans”

✓ located verbatim in the source · abstract, characters 22–44 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Bu Wu Yu was extremely susceptible to late blight.

Material
Bu Wu Yue0
Interactor
Phytophthora infestansPhytophthora infestanse2pathogen
Outcome
extremely susceptiblee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Bu Wu Yu (BWY) is extremely susceptible”

✓ located verbatim in the source · abstract, characters 450–489 · show in text ↑
e1

“late blight resistance of 10 potato cultivars”

✓ located verbatim in the source · abstract, characters 290–335 · show in text ↑
e2

“Phytophthora infestans”

✓ located verbatim in the source · abstract, characters 22–44 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The resistant cultivar rapidly activated defense pathways after infection.

Material
CLSe0
Interactor
P. infestansPhytophthora infestanse2pathogen
Outcome
defense pathwayse0
Direction
activatese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“CLS activates defense pathways rapidly”

✓ located verbatim in the source · abstract, characters 619–657 · show in text ↑
e1

“of potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 131–166 · show in text ↑
e2

“potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 134–166 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The susceptible cultivar prioritized growth and development pathways after infection.

Material
BWYe0
Interactor
P. infestansPhytophthora infestanse2pathogen
Outcome
growth and development pathwayse0
Direction
prioritizese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“BWY prioritizes energy towards growth and development pathways”

✓ located verbatim in the source · abstract, characters 665–727 · show in text ↑
e1

“of potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 131–166 · show in text ↑
e2

“potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 134–166 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Upregulated genes in the resistant cultivar were enriched in oxidation-reduction processes.

Material
CLSe0
Interactor
P. infestansPhytophthora infestanse2pathogen
Outcome
oxidation-reduction processe0
Direction
enrichede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“up-regulated genes in CLS were largely enriched in oxidation-reduction process and SA-related pathways”

✓ located verbatim in the source · abstract, characters 747–849 · show in text ↑
e1

“of potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 131–166 · show in text ↑
e2

“potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 134–166 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Upregulated genes in the resistant cultivar were enriched in SA-related pathways.

Material
CLSe0
Interactor
P. infestansPhytophthora infestanse2pathogen
Outcome
SA-related pathwayse0
Direction
enrichede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“up-regulated genes in CLS were largely enriched in oxidation-reduction process and SA-related pathways”

✓ located verbatim in the source · abstract, characters 747–849 · show in text ↑
e1

“of potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 131–166 · show in text ↑
e2

“potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 134–166 · show in text ↑
Observationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

WRKY transcription factors were significantly enriched in a cluster induced specifically in the resistant cultivar after infection.

Material
CLSe0
Interactor
P. infestansPhytophthora infestanse0pathogen
Gene
WRKY family memberse0
Outcome
enriched in a clustere0
Direction
enrichede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“WRKY family members were significantly enriched in a cluster that is specifically induced in CLS after P. infestans infection”

✓ located verbatim in the source · abstract, characters 1016–1141 · show in text ↑
e1

“of potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 131–166 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Silencing StWRKY26 compromised intrinsic resistance in the resistant cultivar.

Material
CLSe0
Treatment
Silencing StWRKY26e0
Interactor
P. infestansPhytophthora infestanse0pathogen
Gene
StWRKY26e0
Outcome
intrinsic resistance against P. infestanse0
Direction
compromisee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Silencing StWRKY26, one of the four WRKYs with higher induction levels, significantly compromise the intrinsic resistance against P. infestans in CLS”

✓ located verbatim in the source · abstract, characters 1143–1292 · show in text ↑
e1

“of potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 131–166 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors identify StWRKY26 as a positive regulator of late-blight resistance.

Material
CLSe0
Interactor
Phytophthora infestansPhytophthora infestanse2pathogen
Gene
StWRKY26e0
Outcome
late blight resistancee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Phytophthora infestans
Phytophthora infestans · InteractorHoward F. Schwartz, Colorado State University, United States · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“StWRKY26 was identified as a positive regulator for late blight resistance in CLS”

✓ located verbatim in the source · abstract, characters 1761–1842 · show in text ↑
e1

“of potato to P. infestans infection”

✓ located verbatim in the source · abstract, characters 131–166 · show in text ↑
e2

“Phytophthora infestans”

✓ located verbatim in the source · abstract, characters 22–44 · show in text ↑

loss of function · Phytophthora infestans · Solanum tuberosum (potato)Positive and negative results

31 papers: 16 positive, 15 negative or no effect

14 papers in the same direction as this paper · 16 in the opposite direction

  1. negative
  2. positive
  3. positive

27 papers more in this group

See all 31 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.