Paper · 2024 · Biology

Proteomic Analysis to Understand the Promotive Effect of Ethanol on Soybean Growth Under Salt Stress

Setsuko Komatsu; Takumi Nishiuchi

11
claims
21
verbatim quotes
3
citations
3
research areas
✓
Open access · cc-by

Abstract

Finding solutions to mitigate the impact of salinity on crops is important for global food security because soil salinity significantly reduces plant growth and grain yield. Ethanol may play an important role in mitigating the negative salt-induced effects on crops. Soybean root growth was significantly reduced under salt stress; however, it was restored and comparable to control values by ethanol application even under stress. To study the positive mechanism of ethanol on soybean growth, a proteomic approach was carried out. The categories with the greatest changes in protein numbers were protein metabolism, transport, and cell organization in biological processes, nucleus and cytosol in cellular components, and nucleic acid binding activity in molecular functions. Proteomic data were confirmed using immunoblot analysis. Reactive oxygen species enzymes increased under salt stress; among them, mitochondrial ascorbate peroxidase was further accumulated by ethanol application. Among the cell wall and membrane-associated proteins, xyloglucan xyloglucosyl transferase and H+-ATPase increased and decreased, respectively, under salt stress; however, they were restored to control levels by ethanol application. These results suggest that soybeans were adversely affected by salt stress and recovered with ethanol application via the regulation of cell wall and membrane functions through the detoxification of reactive oxygen species.

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Claims 11

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Salt stress significantly reduced soybean root growth.

Taxon
SoybeanGlycine maxe0
Treatment
salt stresse0
Outcome
root growthe0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Soybean root growth was significantly reduced under salt stress”

✓ located verbatim in the source · abstract, characters 267–330 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ethanol restored soybean root growth under salt stress to control values.

Taxon
SoybeanGlycine maxt0
Treatment
ethanol applicatione0
Outcome
Growtht0
Direction
restorede0
Comparator
control valuese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“it was restored and comparable to control values by ethanol application even under stress”

✓ located verbatim in the source · abstract, characters 341–430 · show in text ↑
t0

“Soybean Growth Under Salt Stress”

✓ located verbatim in the source · title, characters 68–100 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Proteins in metabolism, transport and cell organization categories changed most.

Taxon
SoybeanGlycine maxt0
Outcome
protein numberse0
Direction
greatest changese0
Qualifier
protein metabolism, transport, and cell organizatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“The categories with the greatest changes in protein numbers were protein metabolism, transport, and cell organization in biological processes”

✓ located verbatim in the source · abstract, characters 532–673 · show in text ↑
t0

“Proteomic Analysis to Understand the Promotive Effect of Ethanol on Soybean Growth Under Salt Stress”

✓ located verbatim in the source · title, characters 0–100 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Nucleus and cytosol categories had the greatest protein count changes.

Taxon
SoybeanGlycine maxt0
Outcome
nucleus and cytosole0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“nucleus and cytosol in cellular components”

✓ located verbatim in the source · abstract, characters 675–717 · show in text ↑
t0

“Proteomic Analysis to Understand the Promotive Effect of Ethanol on Soybean Growth Under Salt Stress”

✓ located verbatim in the source · title, characters 0–100 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Nucleic acid binding activity had among the greatest protein count changes.

Taxon
SoybeanGlycine maxt0
Outcome
nucleic acid binding activitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“nucleic acid binding activity in molecular functions”

✓ located verbatim in the source · abstract, characters 723–775 · show in text ↑
t0

“Proteomic Analysis to Understand the Promotive Effect of Ethanol on Soybean Growth Under Salt Stress”

✓ located verbatim in the source · title, characters 0–100 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Immunoblot analysis confirmed proteomic data.

Taxon
SoybeanGlycine maxt0
Outcome
Proteomic data were confirmede0
Comparator
immunoblot analysise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Proteomic data were confirmed using immunoblot analysis.”

✓ located verbatim in the source · abstract, characters 777–833 · show in text ↑
t0

“Proteomic Analysis to Understand the Promotive Effect of Ethanol on Soybean Growth Under Salt Stress”

✓ located verbatim in the source · title, characters 0–100 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Reactive oxygen species enzymes increased under salt stress.

Taxon
SoybeanGlycine maxt0
Treatment
salt stresse0
Outcome
Reactive oxygen species enzymese0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Reactive oxygen species enzymes increased under salt stress”

✓ located verbatim in the source · abstract, characters 834–893 · show in text ↑
t0

“Proteomic Analysis to Understand the Promotive Effect of Ethanol on Soybean Growth Under Salt Stress”

✓ located verbatim in the source · title, characters 0–100 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ethanol further accumulated mitochondrial ascorbate peroxidase under salt stress.

Taxon
SoybeanGlycine maxt0
Treatment
ethanol applicatione0
Gene
mitochondrial ascorbate peroxidasee0
Outcome
mitochondrial ascorbate peroxidasee0
Direction
further accumulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“mitochondrial ascorbate peroxidase was further accumulated by ethanol application”

✓ located verbatim in the source · abstract, characters 907–988 · show in text ↑
t0

“Proteomic Analysis to Understand the Promotive Effect of Ethanol on Soybean Growth Under Salt Stress”

✓ located verbatim in the source · title, characters 0–100 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salt stress increased xyloglucan xyloglucosyl transferase.

Taxon
SoybeanGlycine maxt0
Treatment
salt stresse0
Gene
xyloglucan xyloglucosyl transferasee0
Outcome
xyloglucan xyloglucosyl transferasee0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“xyloglucan xyloglucosyl transferase and H+-ATPase increased and decreased, respectively, under salt stress”

✓ located verbatim in the source · abstract, characters 1044–1150 · show in text ↑
t0

“Proteomic Analysis to Understand the Promotive Effect of Ethanol on Soybean Growth Under Salt Stress”

✓ located verbatim in the source · title, characters 0–100 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Salt stress decreased H+-ATPase.

Taxon
SoybeanGlycine maxt0
Treatment
salt stresse0
Gene
H+-ATPasee0
Outcome
H+-ATPasee0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“xyloglucan xyloglucosyl transferase and H+-ATPase increased and decreased, respectively, under salt stress”

✓ located verbatim in the source · abstract, characters 1044–1150 · show in text ↑
t0

“Proteomic Analysis to Understand the Promotive Effect of Ethanol on Soybean Growth Under Salt Stress”

✓ located verbatim in the source · title, characters 0–100 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ethanol restored xyloglucan xyloglucosyl transferase and H+-ATPase to control levels under salt stress.

Taxon
SoybeanGlycine maxt0
Treatment
ethanol applicatione0
Outcome
xyloglucan xyloglucosyl transferase and H+-ATPasee0
Direction
restorede0
Comparator
control levelse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“xyloglucan xyloglucosyl transferase and H+-ATPase increased and decreased, respectively, under salt stress; however, they were restored to control levels by ethanol application.”

✓ located verbatim in the source · abstract, characters 1044–1221 · show in text ↑
t0

“Proteomic Analysis to Understand the Promotive Effect of Ethanol on Soybean Growth Under Salt Stress”

✓ located verbatim in the source · title, characters 0–100 · show in text ↑

ethanol · molecular: metabolites · Glycine max (soybean)Positive and negative results

5 papers: 3 positive, 2 negative or no effect

2 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. no effect
  3. no effect

1 paper more in this group

See all 5 papers →

ethanol · growth · Glycine max (soybean)Positive and negative results

8 papers: 6 positive, 2 negative or no effect

5 papers in the same direction as this paper · 1 in the opposite direction · 1 reporting no difference from an alternative

  1. positive
  2. positive
  3. negative

4 papers more in this group

See all 8 papers →

ethanol · physiology: antioxidant enzymes · Glycine max (soybean)Results agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

salinity · growth · Glycine max (soybean)Positive and negative results

116 papers: 6 positive, 110 negative or no effect

109 papers in the same direction as this paper · 6 in the opposite direction

  1. negative
  2. negative
  3. positive

112 papers more in this group

See all 116 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.