Paper · 2024 · Frontiers in Microbiology

Plant growth-promoting rhizobacterium Bacillus megaterium modulates the expression of antioxidant-related and drought-responsive genes to protect rice (Oryza sativa L.) from drought

Sanghun Lee; Jung-Ae Kim; Jeongsup Song; et al.

15
claims
33
verbatim quotes
36
citations
4
research areas
✓
Open access · cc-by

Abstract

Global climate change poses a significant threat to plant growth and crop yield and is exacerbated by environmental factors, such as drought, salinity, greenhouse gasses, and extreme temperatures. Plant growth-promoting rhizobacteria (PGPR) help plants withstand drought. However, the mechanisms underlying PGPR–plant interactions remain unclear. Thus, this study aimed to isolate PGPR, Bacillus megaterium strains CACC109 and CACC119, from a ginseng field and investigate the mechanisms underlying PGPR-stimulated tolerance to drought stress by evaluating their plant growth-promoting activities and effects on rice growth and stress tolerance through in vitro assays, pot experiments, and physiological and molecular analyses. Compared with B. megaterium type strain ATCC14581, CACC109 and CACC119 exhibited higher survival rates under osmotic stress, indicating their potential to enhance drought tolerance. Additionally, CACC109 and CACC119 strains exhibited various plant growth-promoting activities, including phosphate solubilization, nitrogen fixation, indole-3-acetic acid production, siderophore secretion, 1-aminocyclopropane-1-carboxylate deaminase activity, and exopolysaccharide production. After inoculation, CACC109 and CACC119 significantly improved the seed germination of rice ( Oryza sativa L.) under osmotic stress and promoted root growth under stressed and non-stressed conditions. They also facilitated plant growth in pot experiments, as evidenced by increased shoot and root lengths, weights, and leaf widths. Furthermore, CACC109 and CACC119 improved plant physiological characteristics, such as chlorophyll levels, and production of osmolytes, such as proline. In particular, CACC109- and CACC119-treated rice plants showed better drought tolerance, as evidenced by their higher survival rates, greater chlorophyll contents, and lower water loss rates, compared with mock-treated rice plants. Application of CACC109 and CACC119 upregulated the expression of antioxidant-related genes (e.g., OsCAT , OsPOD , OsAPX , and OsSOD ) and drought-responsive genes (e.g., OsWRKY47, OsZIP23, OsDREB2, OsNAC066, OsAREB1, and OsAREB2 ). In conclusion, CACC109 and CACC119 are promising biostimulants for enhancing plant growth and conferring resistance to abiotic stresses in crop production. Future studies should conduct field trials to validate these findings under real agricultural conditions, optimize inoculation methods for practical use, and further investigate the biochemical and physiological responses underlying the observed benefits.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 15

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

CACC109 and CACC119 showed higher survival under osmotic stress than the B. megaterium type strain.

Treatment
osmotic stresse1
Interactor
CACC109 and CACC119e1symbiont
Outcome
survival ratese1
Direction
highere1
Comparator
B. megaterium type strain ATCC14581e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e1

“Compared with B. megaterium type strain ATCC14581, CACC109 and CACC119 exhibited higher survival rates under osmotic stress”

✓ located verbatim in the source · abstract, characters 729–852 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculation with CACC109 and CACC119 significantly improved rice seed germination under osmotic stress.

Treatment
After inoculatione2
Interactor
CACC109 and CACC119e2symbiont
Outcome
seed germinatione2
Direction
significantly improvede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e2

“After inoculation, CACC109 and CACC119 significantly improved the seed germination of rice ( Oryza sativa L.) under osmotic stress”

✓ located verbatim in the source · abstract, characters 1205–1335 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculation with CACC109 and CACC119 promoted rice root growth under stressed and non-stressed conditions.

Treatment
After inoculatione2
Interactor
CACC109 and CACC119e2symbiont
Outcome
root growthe3
Direction
promotede3
Setting
stressed and non-stressed conditionse3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e2

“After inoculation, CACC109 and CACC119 significantly improved the seed germination of rice ( Oryza sativa L.) under osmotic stress”

✓ located verbatim in the source · abstract, characters 1205–1335 · show in text ↑
e3

“promoted root growth under stressed and non-stressed conditions”

✓ located verbatim in the source · abstract, characters 1340–1403 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculation with CACC109 and CACC119 increased shoot and root lengths and weights in pot experiments.

Treatment
After inoculatione2
Interactor
CACC109 and CACC119e2symbiont
Outcome
shoot and root lengths, weightse4
Direction
increasede4
Setting
pot experimentse4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e2

“After inoculation, CACC109 and CACC119 significantly improved the seed germination of rice ( Oryza sativa L.) under osmotic stress”

✓ located verbatim in the source · abstract, characters 1205–1335 · show in text ↑
e4

“They also facilitated plant growth in pot experiments, as evidenced by increased shoot and root lengths, weights, and leaf widths”

✓ located verbatim in the source · abstract, characters 1405–1534 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculation with CACC109 and CACC119 increased rice leaf width in pot experiments.

Treatment
After inoculatione2
Interactor
CACC109 and CACC119e2symbiont
Outcome
leaf widthse4
Direction
increasede4
Setting
pot experimentse4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e2

“After inoculation, CACC109 and CACC119 significantly improved the seed germination of rice ( Oryza sativa L.) under osmotic stress”

✓ located verbatim in the source · abstract, characters 1205–1335 · show in text ↑
e4

“They also facilitated plant growth in pot experiments, as evidenced by increased shoot and root lengths, weights, and leaf widths”

✓ located verbatim in the source · abstract, characters 1405–1534 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

CACC109 and CACC119 improved chlorophyll levels in rice.

Treatment
CACC109 and CACC119e6
Outcome
chlorophyll levelse6
Direction
improvede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e6

“CACC109 and CACC119 improved plant physiological characteristics, such as chlorophyll levels, and production of osmolytes, such as proline”

✓ located verbatim in the source · abstract, characters 1549–1687 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

CACC109 and CACC119 improved production of osmolytes such as proline in rice.

Treatment
CACC109 and CACC119e6
Outcome
production of osmolytes, such as prolinee6
Direction
improvede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e6

“CACC109 and CACC119 improved plant physiological characteristics, such as chlorophyll levels, and production of osmolytes, such as proline”

✓ located verbatim in the source · abstract, characters 1549–1687 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

CACC109- and CACC119-treated rice had higher survival rates under drought than mock-treated plants.

Treatment
CACC109- and CACC119-treatede1
Outcome
survival ratese1
Direction
highere1
Comparator
mock-treated rice plantse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e1

“CACC109- and CACC119-treated rice plants showed better drought tolerance, as evidenced by their higher survival rates, greater chlorophyll contents, and lower water loss rates, compared with mock-treated rice plants”

✓ located verbatim in the source · abstract, characters 1704–1919 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

CACC109- and CACC119-treated rice had lower water loss rates under drought than mock-treated plants.

Treatment
CACC109- and CACC119-treatede1
Outcome
water loss ratese1
Direction
lowere1
Comparator
mock-treated rice plantse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e1

“CACC109- and CACC119-treated rice plants showed better drought tolerance, as evidenced by their higher survival rates, greater chlorophyll contents, and lower water loss rates, compared with mock-treated rice plants”

✓ located verbatim in the source · abstract, characters 1704–1919 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Application of CACC109 and CACC119 upregulated antioxidant-related genes OsCAT, OsPOD and OsAPX in rice.

Treatment
Application of CACC109 and CACC119e1
Gene
OsCAT , OsPOD , OsAPXe1
Outcome
expression of antioxidant-related genese1
Direction
upregulatede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e1

“Application of CACC109 and CACC119 upregulated the expression of antioxidant-related genes (e.g., OsCAT , OsPOD , OsAPX , and OsSOD ) and drought-responsive genes (e.g., OsWRKY47, OsZIP23, OsDREB2, OsNAC066, OsAREB1, and OsAREB2 )”

✓ located verbatim in the source · abstract, characters 1921–2151 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Application of CACC109 and CACC119 upregulated antioxidant-related gene OsSOD in rice.

Treatment
Application of CACC109 and CACC119e1
Gene
OsSODe1
Outcome
expression of antioxidant-related genese1
Direction
upregulatede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e1

“Application of CACC109 and CACC119 upregulated the expression of antioxidant-related genes (e.g., OsCAT , OsPOD , OsAPX , and OsSOD ) and drought-responsive genes (e.g., OsWRKY47, OsZIP23, OsDREB2, OsNAC066, OsAREB1, and OsAREB2 )”

✓ located verbatim in the source · abstract, characters 1921–2151 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Application of CACC109 and CACC119 upregulated drought-responsive genes OsWRKY47, OsZIP23 and OsDREB2 in rice.

Treatment
Application of CACC109 and CACC119e1
Gene
OsWRKY47, OsZIP23, OsDREB2e1
Outcome
drought-responsive genese1
Direction
upregulatede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e1

“Application of CACC109 and CACC119 upregulated the expression of antioxidant-related genes (e.g., OsCAT , OsPOD , OsAPX , and OsSOD ) and drought-responsive genes (e.g., OsWRKY47, OsZIP23, OsDREB2, OsNAC066, OsAREB1, and OsAREB2 )”

✓ located verbatim in the source · abstract, characters 1921–2151 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Application of CACC109 and CACC119 upregulated drought-responsive genes OsNAC066, OsAREB1 and OsAREB2 in rice.

Treatment
Application of CACC109 and CACC119e1
Gene
OsNAC066, OsAREB1, and OsAREB2e1
Outcome
drought-responsive genese1
Direction
upregulatede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e1

“Application of CACC109 and CACC119 upregulated the expression of antioxidant-related genes (e.g., OsCAT , OsPOD , OsAPX , and OsSOD ) and drought-responsive genes (e.g., OsWRKY47, OsZIP23, OsDREB2, OsNAC066, OsAREB1, and OsAREB2 )”

✓ located verbatim in the source · abstract, characters 1921–2151 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

CACC109 and CACC119 are promising biostimulants for rice growth and abiotic stress resistance in crop production (authors conclude).

Outcome
promising biostimulants for enhancing plant growthe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e1

“In conclusion, CACC109 and CACC119 are promising biostimulants for enhancing plant growth and conferring resistance to abiotic stresses in crop production”

✓ located verbatim in the source · abstract, characters 2153–2307 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

CACC109 and CACC119 showed several plant growth-promoting activities in vitro.

Interactor
CACC109 and CACC119e1symbiont
Outcome
plant growth-promoting activitiese1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“protect rice (Oryza sativa L.) from drought”

✓ located verbatim in the source · title, characters 138–181 · show in text ↑
e1

“CACC109 and CACC119 strains exhibited various plant growth-promoting activities, including phosphate solubilization, nitrogen fixation, indole-3-acetic acid production, siderophore secretion, 1-aminocyclopropane-1-carboxylate deaminase activity, and exopolysaccharide production”

✓ located verbatim in the source · abstract, characters 925–1203 · show in text ↑

drought · survival · Oryza sativa (rice)Positive and negative results

5 papers: 4 positive, 1 negative or no effect

3 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

inoculation · growth · Oryza sativa (rice)Positive and negative results

399 papers: 362 positive, 37 negative or no effect

361 papers in the same direction as this paper · 34 in the opposite direction · 3 reporting no difference from an alternative

  1. no effect
  2. negative
  3. no effect

395 papers more in this group

See all 399 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.