Paper · 2023 · Science Bulletin

Diurnal regulation of alternative splicing associated with thermotolerance in rice by two glycine-rich RNA-binding proteins

Chuang Yang; Anni Luo; Hai-Ping Lu; et al.

8
claims
16
verbatim quotes
30
citations
3
research areas
✓
Open access · cc-by

Abstract

Rice (Oryza sativa L.) production is threatened by global warming associated with extreme high temperatures, and rice heat sensitivity is differed when stress occurs between daytime and nighttime. However, the underlying molecular mechanism are largely unknown. We show here that two glycine-rich RNA binding proteins, OsGRP3 and OsGRP162, are required for thermotolerance in rice, especially at nighttime. The rhythmic expression of OsGRP3/OsGRP162 peaks at midnight, and at these coincident times, is increased by heat stress. This is largely dependent on the evening complex component OsELF3-2. We next found that the double mutant of OsGRP3/OsGRP162 is strikingly more sensitive to heat stress in terms of survival rate and seed setting rate when comparing to the wild-type plants. Interestingly, the defect in thermotolerance is more evident when heat stress occurred in nighttime than that in daytime. Upon heat stress, the double mutant of OsGRP3/OsGRP162 displays globally reduced expression of heat-stress responsive genes, and increases of mRNA alternative splicing dominated by exon-skipping. This study thus reveals the important role of OsGRP3/OsGRP162 in thermotolerance in rice, and unravels the mechanism on how OsGRP3/OsGRP162 regulate thermotolerance in a diurnal manner.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

OsGRP3 and OsGRP162 are required for heat tolerance, especially at night.

Gene
OsGRP3 and OsGRP162e0
Outcome
thermotolerancee0
Qualifier
especially at nighttimee0

Not reportedMaterialOrgan / stageInteractorTreatmentComparatorSettingDirectionValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“OsGRP3 and OsGRP162, are required for thermotolerance in rice, especially at nighttime.”

✓ located verbatim in the source · abstract, characters 319–406 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 78–82 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsGRP3 and OsGRP162 expression peaks at midnight and rises under heat stress.

Gene
OsGRP3/OsGRP162e0
Outcome
expression of OsGRP3/OsGRP162e0
Direction
increasede0
Qualifier
midnighte0

Not reportedMaterialOrgan / stageInteractorTreatmentComparatorSettingValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The rhythmic expression of OsGRP3/OsGRP162 peaks at midnight, and at these coincident times, is increased by heat stress.”

✓ located verbatim in the source · abstract, characters 407–528 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 78–82 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

The heat-induced rhythmic expression largely depends on OsELF3-2.

Gene
OsELF3-2e0
Outcome
largely dependente0

Not reportedMaterialOrgan / stageInteractorTreatmentComparatorSettingDirectionValueQualifier

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“This is largely dependent on the evening complex component OsELF3-2.”

✓ located verbatim in the source · abstract, characters 529–597 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 78–82 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The double mutant had lower heat-stress survival than wild type.

Material
double mutant of OsGRP3/OsGRP162e0
Treatment
heat stresse0
Outcome
survival ratee0
Direction
more sensitivee0
Comparator
wild-type plantse0

Not reportedGeneOrgan / stageInteractorSettingValueQualifier

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the double mutant of OsGRP3/OsGRP162 is strikingly more sensitive to heat stress in terms of survival rate and seed setting rate when comparing to the wild-type plants.”

✓ located verbatim in the source · abstract, characters 617–785 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 78–82 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The double mutant had lower seed setting under heat than wild type.

Material
double mutant of OsGRP3/OsGRP162e0
Treatment
heat stresse0
Outcome
seed setting ratee0
Direction
more sensitivee0
Comparator
wild-type plantse0

Not reportedGeneOrgan / stageInteractorSettingValueQualifier

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the double mutant of OsGRP3/OsGRP162 is strikingly more sensitive to heat stress in terms of survival rate and seed setting rate when comparing to the wild-type plants.”

✓ located verbatim in the source · abstract, characters 617–785 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 78–82 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The thermotolerance defect was greater under night than daytime heat.

Treatment
heat stress occurred in nighttimee0
Outcome
defect in thermotolerancee0
Direction
more evidente0
Comparator
daytimee0

Not reportedMaterialGeneOrgan / stageInteractorSettingValueQualifier

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the defect in thermotolerance is more evident when heat stress occurred in nighttime than that in daytime.”

✓ located verbatim in the source · abstract, characters 801–907 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 78–82 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Heat-stressed double mutants had globally reduced heat-response gene expression.

Material
double mutant of OsGRP3/OsGRP162e0
Treatment
heat stresse0
Outcome
expression of heat-stress responsive genese0
Direction
reducede0

Not reportedGeneOrgan / stageInteractorComparatorSettingValueQualifier

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Upon heat stress, the double mutant of OsGRP3/OsGRP162 displays globally reduced expression of heat-stress responsive genes”

✓ located verbatim in the source · abstract, characters 908–1031 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 78–82 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Heat-stressed double mutants had increased mRNA alternative splicing dominated by exon skipping.

Outcome
mRNA alternative splicinge0
Direction
increasese0
Qualifier
exon-skippinge0

Not reportedMaterialGeneOrgan / stageInteractorTreatmentComparatorSettingValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“increases of mRNA alternative splicing dominated by exon-skipping.”

✓ located verbatim in the source · abstract, characters 1037–1103 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 78–82 · show in text ↑

heat · tolerance: abiotic · Oryza sativa (rice)Positive and negative results

4 papers: 3 positive, 1 negative or no effect

3 in the opposite direction

  1. positive
  2. positive
  3. positive
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.