Paper · 2023 · BMC Plant Biology

Transcriptomics and physiology reveal the mechanism of potassium indole-3-butyrate (IBAK) mediating rice resistance to salt stress

Hang Zhou; Meiling Liu; Fengyan Meng; et al.

10
claims
15
verbatim quotes
9
citations
2
research areas
✓
Open access · cc-by

Abstract

Abstract Background IBAK, as a plant growth regulator, has broad application prospects in improving crop resistance to abiotic stress. Results In this study, the regulation mechanism of IBAK on rice was revealed by physiology and transcriptomics by spraying 80 mg·L −1 IBAK solution on rice leaves at the early jointing stage under salt stress. The results showed that spraying IBAK solution on leaves under salt stress could significantly increase K + content, decrease Na + content, increase net photosynthetic rate (Pn), and increase the activity of catalase (CAT) and the contents of glutathione (GSH) and soluble protein in rice leaves. Using IBAK under salt stress increased the expression of plant hormone signal transduction pathway-related genes LOC4332548 and LOC4330957, which may help rice to more effectively sense and respond to plant hormone signals and enhance resistance to salt stress. In addition, the photosynthesis pathway-related genes LOC4339270, LOC4327150, and LOC4346326 were upregulated after using IBAK under salt stress, and the upregulation of these genes may be beneficial to improve the efficiency of photosynthesis and increase the photosynthetic capacity of rice. Regarding starch and sucrose metabolism pathway, spraying IBAK on leaves could promote the expression of sucrose synthesis-related gene LOC4347800 and increase the expression of starch synthesis-related genes LOC4330709 and LOC4343010 under salt stress. Finally, IBAK spraying resulted in the upregulation of multiple 50 S and 30 S ribosomal protein genes in the ribosome pathway, which may increase protein synthesis, help maintain cell function, and promote rice growth and development. Conclusion The results of this study revealed the mechanism of IBAK mediating resistance to salt stress in rice.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

IBAK spraying increased K content in salt-stressed rice leaves.

Treatment
spraying IBAK solution on leaves under salt stresse0
Outcome
K + contente0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“spraying IBAK solution on leaves under salt stress could significantly increase K + content, decrease Na + content, increase net photosynthetic rate (Pn), and increase the activity of catalase (CAT) and the contents of glutathione (GSH) and soluble protein in rice leaves”

✓ located verbatim in the source · abstract, characters 369–640 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

IBAK spraying decreased Na content in salt-stressed rice leaves.

Treatment
spraying IBAK solution on leaves under salt stresse0
Outcome
Na + contente0
Direction
decreasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“spraying IBAK solution on leaves under salt stress could significantly increase K + content, decrease Na + content, increase net photosynthetic rate (Pn), and increase the activity of catalase (CAT) and the contents of glutathione (GSH) and soluble protein in rice leaves”

✓ located verbatim in the source · abstract, characters 369–640 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

IBAK spraying increased net photosynthetic rate in salt-stressed rice leaves.

Treatment
spraying IBAK solution on leaves under salt stresse0
Outcome
net photosynthetic rate (Pn)e0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“spraying IBAK solution on leaves under salt stress could significantly increase K + content, decrease Na + content, increase net photosynthetic rate (Pn), and increase the activity of catalase (CAT) and the contents of glutathione (GSH) and soluble protein in rice leaves”

✓ located verbatim in the source · abstract, characters 369–640 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

IBAK spraying increased catalase activity in salt-stressed rice leaves.

Treatment
spraying IBAK solution on leaves under salt stresse0
Gene
catalase (CAT)e0
Outcome
activity of catalase (CAT)e0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“spraying IBAK solution on leaves under salt stress could significantly increase K + content, decrease Na + content, increase net photosynthetic rate (Pn), and increase the activity of catalase (CAT) and the contents of glutathione (GSH) and soluble protein in rice leaves”

✓ located verbatim in the source · abstract, characters 369–640 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

IBAK spraying increased glutathione and soluble protein content in salt-stressed rice leaves.

Treatment
spraying IBAK solution on leaves under salt stresse0
Outcome
contents of glutathione (GSH) and soluble proteine0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“spraying IBAK solution on leaves under salt stress could significantly increase K + content, decrease Na + content, increase net photosynthetic rate (Pn), and increase the activity of catalase (CAT) and the contents of glutathione (GSH) and soluble protein in rice leaves”

✓ located verbatim in the source · abstract, characters 369–640 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

IBAK increased expression of LOC4332548 and LOC4330957 under salt stress.

Treatment
Using IBAK under salt stresse0
Gene
LOC4332548 and LOC4330957e0
Outcome
expression of plant hormone signal transduction pathway-related genese0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Using IBAK under salt stress increased the expression of plant hormone signal transduction pathway-related genes LOC4332548 and LOC4330957”

✓ located verbatim in the source · abstract, characters 642–780 · show in text ↑
e1

“soluble protein in rice leaves”

✓ located verbatim in the source · abstract, characters 610–640 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

IBAK upregulated photosynthesis pathway genes LOC4339270, LOC4327150 and LOC4346326 under salt stress.

Treatment
using IBAK under salt stresse0
Gene
LOC4339270, LOC4327150, and LOC4346326e0
Outcome
photosynthesis pathway-related genes LOC4339270, LOC4327150, and LOC4346326e0
Direction
upregulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“photosynthesis pathway-related genes LOC4339270, LOC4327150, and LOC4346326 were upregulated after using IBAK under salt stress”

✓ located verbatim in the source · abstract, characters 921–1048 · show in text ↑
e1

“soluble protein in rice leaves”

✓ located verbatim in the source · abstract, characters 610–640 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

IBAK promoted expression of sucrose synthesis gene LOC4347800 under salt stress.

Treatment
spraying IBAK on leavese0
Gene
LOC4347800e0
Outcome
expression of sucrose synthesis-related genee0
Direction
promotee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“spraying IBAK on leaves could promote the expression of sucrose synthesis-related gene LOC4347800 and increase the expression of starch synthesis-related genes LOC4330709 and LOC4343010 under salt stress”

✓ located verbatim in the source · abstract, characters 1247–1450 · show in text ↑
e1

“soluble protein in rice leaves”

✓ located verbatim in the source · abstract, characters 610–640 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

IBAK increased expression of starch synthesis genes LOC4330709 and LOC4343010 under salt stress.

Treatment
spraying IBAK on leavese0
Gene
LOC4330709 and LOC4343010e0
Outcome
expression of starch synthesis-related genese0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“spraying IBAK on leaves could promote the expression of sucrose synthesis-related gene LOC4347800 and increase the expression of starch synthesis-related genes LOC4330709 and LOC4343010 under salt stress”

✓ located verbatim in the source · abstract, characters 1247–1450 · show in text ↑
e1

“soluble protein in rice leaves”

✓ located verbatim in the source · abstract, characters 610–640 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

IBAK upregulated multiple 50 S and 30 S ribosomal protein genes.

Treatment
IBAK sprayinge0
Outcome
multiple 50 S and 30 S ribosomal protein genese0
Direction
upregulatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“IBAK spraying resulted in the upregulation of multiple 50 S and 30 S ribosomal protein genes in the ribosome pathway”

✓ located verbatim in the source · abstract, characters 1461–1577 · show in text ↑
e1

“soluble protein in rice leaves”

✓ located verbatim in the source · abstract, characters 610–640 · show in text ↑

salinity · physiology: osmolytes · Oryza sativa (rice)Results differ

29 papers: 19 positive, 10 negative or no effect

18 papers in the same direction as this paper · 10 in the opposite direction

  1. negative
  2. negative
  3. negative

25 papers more in this group

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salinity · physiology: antioxidant enzymes · Oryza sativa (rice)Results differ

43 papers: 18 positive, 25 negative or no effect

17 papers in the same direction as this paper · 25 in the opposite direction

  1. positive
  2. negative
  3. negative

39 papers more in this group

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salinity · physiology: photosynthesis · Oryza sativa (rice)Results differ

69 papers: 6 positive, 63 negative or no effect

5 papers in the same direction as this paper · 63 in the opposite direction

  1. negative
  2. negative
  3. negative

65 papers more in this group

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application · molecular: expression · Oryza sativa (rice)Positive and negative results

21 papers: 20 positive, 1 negative or no effect

19 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

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application · physiology: photosynthesis · Oryza sativa (rice)Positive and negative results

47 papers: 46 positive, 1 negative or no effect

45 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. no effect
  3. positive

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salinity · molecular: metabolites · Oryza sativa (rice)Positive and negative results

64 papers: 24 positive, 40 negative or no effect

23 papers in the same direction as this paper · 40 in the opposite direction

  1. negative
  2. negative
  3. negative

60 papers more in this group

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salinity · molecular: expression · Oryza sativa (rice)Positive and negative results

72 papers: 49 positive, 23 negative or no effect

48 papers in the same direction as this paper · 23 in the opposite direction

  1. no effect
  2. no effect
  3. negative

68 papers more in this group

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application · molecular: metabolites · Oryza sativa (rice)Positive and negative results

75 papers: 72 positive, 3 negative or no effect

71 papers in the same direction as this paper · 3 in the opposite direction

  1. no effect
  2. no effect
  3. no effect

71 papers more in this group

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8 of 10 groups shown: named compounds and organisms first, then groups whose results differ (checked claim by claim), then those with positive and negative results, then the smaller groups.

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.